Daphnia pulex (common water flea): DAPPUDRAFT_301443
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Entry
DAPPUDRAFT_301443 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DAPPUDRAFT_301443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpx03019
]
DAPPUDRAFT_301443
Messenger RNA biogenesis [BR:
dpx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
DAPPUDRAFT_301443
mRNA degradation factors
5'-3' decay
Decapping complex
DAPPUDRAFT_301443
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_Prp19
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Pdc1_Ge1
Motif
Other DBs
NCBI-ProteinID:
EFX68471
JGI:
Dappu1_301443
UniProt:
E9HIB6
LinkDB
All DBs
Position
Unknown
AA seq
1194 aa
AA seq
DB search
MSCSFNGQTSKDEELTIMFSEAMDWQSVATKSSEDVVIYPVNGGHRSGSSQIKVKNIVDS
SWDKAFHWGNLVATHYKGQYFAYALTVPGKSAGMVRVIRTGSSDRILLKGFHGFVRDLSF
AFHEKRILVAAVDEYSYLLVHEIIGSTAQLILQVNPDGITTATDNHRVVWCPYVPENPKT
LDELSDGLRNDADDHALMLAASHDCRVEIWHLGHINGTVTYPSVTTGSTQITSFDDAVVD
VAFSPDSTAIAVASLDGYVRFFLVNIKKEIPKILHKWQPHEGKRLSGIIFLDNLSHPTIR
ECPLWKWAVTSAENNTEFKLWSCELWKCHQTIRFKSDDSIPIIQKMTLDLSASFLLISDI
HRKALYVMHIEQEPEERNPLSDDGEEPSKSEERTISKVSSITQLLLPFSAISVAIREASI
RPPSQPLGDEDFDGDEKASKVIMKMFVVQPKSLQKCKAVFELGTSVPLGEAIGTSFSTIN
TTSEYEPVNVVKTASATNHINLLTPDAFVSPAKTNTDSSSQKQSIVTSPGTVSPLPPASS
EILALSSPRRPTPEVTSSTTPKRNGIPSGGSSPSREVEEILGTRPMTEGSIESPDTSSAT
VPTGPALQDALSAYPISLSPAMGRSASVNSKGPSPIMDQYNAPTVEDPLCTYPTSAVAAP
TPSSVSADLNGSLLELFKEALVVEALPAQTAWPSVLPPLNVQQLQRPKEPPVRETDTGSS
AQMQMMQQTLDQLVQLVSAQRVEQQQLKNEIGQMKAEMTRMHSPEPIQPPWIAQMESTLA
VYFDRQTKKLDEVNSPAKTQQSVSKLQSTIRSEFENKAHTLEQRSVDFIRKELQSVIATE
MNKLEPFLKNSTMQMMSHLSQNKSIIDAYSQATSTAAVSAMNRGCKDAITSQLLPSLEVS
FQTLFAQLHNTFSKGITECEHSFRNDYSERICVTRHFNMNNVTLPVVRNIESNLERHRRL
QDKESAVQLNATMDKIAVVLDQVRQSISSDTKTELKKISHEFPERVRVLLTPVIQSEMQH
AIKDQKAALDGAMLAVHQAAQIQSRAVTPAVVELTPAEHQIQLKHMIDQGRLFEAFQRAL
YMNDLSMVTFVCSKVDAGKLFASDPCVFPPQILLALIQQLSADLGSSTELKLEYLQEALL
AVNTQDPQIKEHAPKVMPQLVVNLHAQLANNLSVTLQRQLRMLLRCAEPLAAAK
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgagctgcagttttaatggtcagacgagcaaagatgaggaacttaccattatgttttca
gaggcgatggattggcaaagtgttgcaacaaaatcatcagaagatgttgttatttatccg
gtcaatggagggcaccgttctggtagctcacagatcaaagttaaaaatatagttgattca
tcatgggataaagctttccactggggaaacctggttgccactcattacaaggggcaatat
tttgcatatgcactgacagtccccggaaaatcagctggcatggttcgagtgataagaact
gggagcagtgatagaatcctattaaagggattccatggctttgttagagacctgtctttt
gcgttccatgagaaaaggatactggtggctgccgtagatgaatatagttaccttcttgtc
catgagatcattggatcaactgctcaattgattttgcaagtgaatcctgatggaattact
actgccaccgacaaccatcgtgtagtctggtgtccctatgtcccagaaaatcccaaaact
ctagatgaattgagtgatggtttgagaaatgatgctgatgatcatgcattaatgcttgca
gcatcacatgattgccgtgtagaaatatggcatctgggtcacatcaatggaacagtcact
taccccagtgtgactactggatccactcaaattacctcatttgatgatgctgttgttgac
gtggcattttctccagattcaacagcaattgctgttgccagtttggatggctacgtcaga
ttctttttggtcaatattaaaaaggaaattccaaaaattttgcacaagtggcaaccacat
gaaggaaaaagactctcaggcattattttcttggacaatctcagtcatccaactatcaga
gaatgtccgctgtggaagtgggcagtcacatccgcggaaaacaacacagagtttaagcta
tggtcctgtgaattgtggaagtgccatcagacgatccgtttcaaatcggatgattctatt
cccattatccaaaaaatgacacttgacttgtcggcttcattccttcttatttccgacatt
catcgcaaggctttgtacgttatgcacatagaacaggagccagaagagaggaatccgctc
tctgatgacggcgaagaaccttccaaatcggaagaacgaaccatctcgaaagtgagcagc
atcactcaactcctgttgcctttctcagccattagtgttgccatccgggaagcttcaatt
aggccaccttcccagccattgggtgacgaggactttgatggagatgaaaaggccagtaaa
gtgataatgaagatgttcgtagtgcagcccaagtcgctgcaaaagtgcaaagcagtcttt
gaattgggaacttcggtcccactgggcgaggctattggaacctccttctccaccatcaac
acaacgtcggagtatgaaccggtgaatgtagtcaaaacagcatccgctaccaaccacatc
aacctgttgacacccgacgcgttcgtctctccagccaaaaccaacacggattcttcatct
caaaagcaatcgattgtgacttcaccaggcaccgtgagtcccttgccgcctgcatccagt
gagattctagccctttcaagcccacgacgaccgacacctgaggttacctcatcaacgacg
ccgaagcggaacggcattcccagtgggggtagcagtcccagtcgcgaagttgaagaaatc
ctgggaacaagacctatgacggaaggctcgatcgagtcacccgatacctcttccgccacc
gtgcctaccggtccagctcttcaagacgccttatcggcctatcccatttcgttgtcaccg
gctatgggtcgctcagcctcggtcaacagcaagggaccatcccccatcatggatcaatat
aacgcaccaactgttgaggatccgctatgcacttaccctacttccgctgttgcagctcct
actccttcctccgtatctgcggatttaaacggcagtttgctggaattatttaaagaagcc
cttgtcgttgaagctttgccagcgcaaacagcgtggccgtccgttcttccgccactcaac
gttcaacaactacaacggcccaaagagccgccagtgcgcgaaacggataccggaagttct
gctcagatgcaaatgatgcagcagacgctggaccaattggttcagctcgtctctgcccaa
cgcgtagaacaacaacagctgaagaacgagatcggtcagatgaaggcggaaatgactcgg
atgcactcaccggaacccatccagccgccatggatcgctcagatggaatccactttggcc
gtttatttcgatcgccagactaaaaagttggacgaagttaattctccagcgaaaacacaa
caatccgtgtcgaaacttcagtcgacgattcgatccgaattcgagaacaaggcgcataca
ctggagcaacggagtgttgattttatccgcaaagagttgcaatcggtcattgcaacggag
atgaataaactggaaccgtttttgaaaaactctacgatgcaaatgatgagccatttgtcg
cagaacaagtccatcattgatgcgtacagccaagcgacttcgacggcggccgtgtcggcc
atgaatcgcggctgcaaggatgccatcacgtcacagctgcttccgtcgctggaagtctcg
ttccagacactcttcgcccagctgcacaacactttttccaaggggatcaccgagtgtgag
cattcatttagaaatgactattcagaaaggatttgcgtcacacgtcacttcaatatgaat
aacgttaccttaccagtcgtacgaaacatcgagagcaacctggaacgacaccgcaggctg
caagacaaggaatcggccgttcagctcaacgccaccatggataagattgccgtcgttttg
gaccaagtccggcagtcgatttcgtccgacaccaagacggaattgaagaaaatctctcac
gaatttccggagagggttcgtgtacttttgactcctgtgatccagtccgagatgcaacac
gccatcaaggatcagaaagcggctctggacggtgccatgttggcagttcaccaagccgcc
caaattcaatcgcgcgctgtgacgccagcggtggtggagctgacgccagccgagcatcaa
atccaattgaaacacatgattgaccaaggacgattattcgaagctttccagagggcgctc
tacatgaacgacttgagtatggtaacgttcgtttgctcaaaagtcgatgccgggaaactc
ttcgcctcggatccttgcgtctttccaccacaaatccttttggcgttgatccagcaacta
tctgcagatcttggctcgtcgactgaattgaaattagaatatctccaagaagcactcttg
gctgtgaacactcaagatccgcagattaaggagcacgcacccaaggtgatgcctcaactg
gtggtgaatttgcatgcccagctggccaacaatctcagtgtcacactgcaacgtcaattg
cgcatgttactgcgctgtgccgagccattggctgcagccaagtag
DBGET
integrated database retrieval system