KEGG   Daphnia pulex (common water flea): DAPPUDRAFT_301443
Entry
DAPPUDRAFT_301443 CDS       T04347                                 
Name
(GenBank) hypothetical protein
  KO
K12616  enhancer of mRNA-decapping protein 4
Organism
dpx  Daphnia pulex (common water flea)
Pathway
dpx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dpx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DAPPUDRAFT_301443
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dpx03019]
    DAPPUDRAFT_301443
Messenger RNA biogenesis [BR:dpx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     DAPPUDRAFT_301443
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     DAPPUDRAFT_301443
SSDB
Motif
Pfam: Ge1_WD40 EDC4_C WD40 WD40_Prp19 WDR55 WD40_WDHD1_1st Beta-prop_EML_2 Pdc1_Ge1
Other DBs
NCBI-ProteinID: EFX68471
JGI: Dappu1_301443
UniProt: E9HIB6
LinkDB
Position
Unknown
AA seq 1194 aa
MSCSFNGQTSKDEELTIMFSEAMDWQSVATKSSEDVVIYPVNGGHRSGSSQIKVKNIVDS
SWDKAFHWGNLVATHYKGQYFAYALTVPGKSAGMVRVIRTGSSDRILLKGFHGFVRDLSF
AFHEKRILVAAVDEYSYLLVHEIIGSTAQLILQVNPDGITTATDNHRVVWCPYVPENPKT
LDELSDGLRNDADDHALMLAASHDCRVEIWHLGHINGTVTYPSVTTGSTQITSFDDAVVD
VAFSPDSTAIAVASLDGYVRFFLVNIKKEIPKILHKWQPHEGKRLSGIIFLDNLSHPTIR
ECPLWKWAVTSAENNTEFKLWSCELWKCHQTIRFKSDDSIPIIQKMTLDLSASFLLISDI
HRKALYVMHIEQEPEERNPLSDDGEEPSKSEERTISKVSSITQLLLPFSAISVAIREASI
RPPSQPLGDEDFDGDEKASKVIMKMFVVQPKSLQKCKAVFELGTSVPLGEAIGTSFSTIN
TTSEYEPVNVVKTASATNHINLLTPDAFVSPAKTNTDSSSQKQSIVTSPGTVSPLPPASS
EILALSSPRRPTPEVTSSTTPKRNGIPSGGSSPSREVEEILGTRPMTEGSIESPDTSSAT
VPTGPALQDALSAYPISLSPAMGRSASVNSKGPSPIMDQYNAPTVEDPLCTYPTSAVAAP
TPSSVSADLNGSLLELFKEALVVEALPAQTAWPSVLPPLNVQQLQRPKEPPVRETDTGSS
AQMQMMQQTLDQLVQLVSAQRVEQQQLKNEIGQMKAEMTRMHSPEPIQPPWIAQMESTLA
VYFDRQTKKLDEVNSPAKTQQSVSKLQSTIRSEFENKAHTLEQRSVDFIRKELQSVIATE
MNKLEPFLKNSTMQMMSHLSQNKSIIDAYSQATSTAAVSAMNRGCKDAITSQLLPSLEVS
FQTLFAQLHNTFSKGITECEHSFRNDYSERICVTRHFNMNNVTLPVVRNIESNLERHRRL
QDKESAVQLNATMDKIAVVLDQVRQSISSDTKTELKKISHEFPERVRVLLTPVIQSEMQH
AIKDQKAALDGAMLAVHQAAQIQSRAVTPAVVELTPAEHQIQLKHMIDQGRLFEAFQRAL
YMNDLSMVTFVCSKVDAGKLFASDPCVFPPQILLALIQQLSADLGSSTELKLEYLQEALL
AVNTQDPQIKEHAPKVMPQLVVNLHAQLANNLSVTLQRQLRMLLRCAEPLAAAK
NT seq 3585 nt   +upstreamnt  +downstreamnt
atgagctgcagttttaatggtcagacgagcaaagatgaggaacttaccattatgttttca
gaggcgatggattggcaaagtgttgcaacaaaatcatcagaagatgttgttatttatccg
gtcaatggagggcaccgttctggtagctcacagatcaaagttaaaaatatagttgattca
tcatgggataaagctttccactggggaaacctggttgccactcattacaaggggcaatat
tttgcatatgcactgacagtccccggaaaatcagctggcatggttcgagtgataagaact
gggagcagtgatagaatcctattaaagggattccatggctttgttagagacctgtctttt
gcgttccatgagaaaaggatactggtggctgccgtagatgaatatagttaccttcttgtc
catgagatcattggatcaactgctcaattgattttgcaagtgaatcctgatggaattact
actgccaccgacaaccatcgtgtagtctggtgtccctatgtcccagaaaatcccaaaact
ctagatgaattgagtgatggtttgagaaatgatgctgatgatcatgcattaatgcttgca
gcatcacatgattgccgtgtagaaatatggcatctgggtcacatcaatggaacagtcact
taccccagtgtgactactggatccactcaaattacctcatttgatgatgctgttgttgac
gtggcattttctccagattcaacagcaattgctgttgccagtttggatggctacgtcaga
ttctttttggtcaatattaaaaaggaaattccaaaaattttgcacaagtggcaaccacat
gaaggaaaaagactctcaggcattattttcttggacaatctcagtcatccaactatcaga
gaatgtccgctgtggaagtgggcagtcacatccgcggaaaacaacacagagtttaagcta
tggtcctgtgaattgtggaagtgccatcagacgatccgtttcaaatcggatgattctatt
cccattatccaaaaaatgacacttgacttgtcggcttcattccttcttatttccgacatt
catcgcaaggctttgtacgttatgcacatagaacaggagccagaagagaggaatccgctc
tctgatgacggcgaagaaccttccaaatcggaagaacgaaccatctcgaaagtgagcagc
atcactcaactcctgttgcctttctcagccattagtgttgccatccgggaagcttcaatt
aggccaccttcccagccattgggtgacgaggactttgatggagatgaaaaggccagtaaa
gtgataatgaagatgttcgtagtgcagcccaagtcgctgcaaaagtgcaaagcagtcttt
gaattgggaacttcggtcccactgggcgaggctattggaacctccttctccaccatcaac
acaacgtcggagtatgaaccggtgaatgtagtcaaaacagcatccgctaccaaccacatc
aacctgttgacacccgacgcgttcgtctctccagccaaaaccaacacggattcttcatct
caaaagcaatcgattgtgacttcaccaggcaccgtgagtcccttgccgcctgcatccagt
gagattctagccctttcaagcccacgacgaccgacacctgaggttacctcatcaacgacg
ccgaagcggaacggcattcccagtgggggtagcagtcccagtcgcgaagttgaagaaatc
ctgggaacaagacctatgacggaaggctcgatcgagtcacccgatacctcttccgccacc
gtgcctaccggtccagctcttcaagacgccttatcggcctatcccatttcgttgtcaccg
gctatgggtcgctcagcctcggtcaacagcaagggaccatcccccatcatggatcaatat
aacgcaccaactgttgaggatccgctatgcacttaccctacttccgctgttgcagctcct
actccttcctccgtatctgcggatttaaacggcagtttgctggaattatttaaagaagcc
cttgtcgttgaagctttgccagcgcaaacagcgtggccgtccgttcttccgccactcaac
gttcaacaactacaacggcccaaagagccgccagtgcgcgaaacggataccggaagttct
gctcagatgcaaatgatgcagcagacgctggaccaattggttcagctcgtctctgcccaa
cgcgtagaacaacaacagctgaagaacgagatcggtcagatgaaggcggaaatgactcgg
atgcactcaccggaacccatccagccgccatggatcgctcagatggaatccactttggcc
gtttatttcgatcgccagactaaaaagttggacgaagttaattctccagcgaaaacacaa
caatccgtgtcgaaacttcagtcgacgattcgatccgaattcgagaacaaggcgcataca
ctggagcaacggagtgttgattttatccgcaaagagttgcaatcggtcattgcaacggag
atgaataaactggaaccgtttttgaaaaactctacgatgcaaatgatgagccatttgtcg
cagaacaagtccatcattgatgcgtacagccaagcgacttcgacggcggccgtgtcggcc
atgaatcgcggctgcaaggatgccatcacgtcacagctgcttccgtcgctggaagtctcg
ttccagacactcttcgcccagctgcacaacactttttccaaggggatcaccgagtgtgag
cattcatttagaaatgactattcagaaaggatttgcgtcacacgtcacttcaatatgaat
aacgttaccttaccagtcgtacgaaacatcgagagcaacctggaacgacaccgcaggctg
caagacaaggaatcggccgttcagctcaacgccaccatggataagattgccgtcgttttg
gaccaagtccggcagtcgatttcgtccgacaccaagacggaattgaagaaaatctctcac
gaatttccggagagggttcgtgtacttttgactcctgtgatccagtccgagatgcaacac
gccatcaaggatcagaaagcggctctggacggtgccatgttggcagttcaccaagccgcc
caaattcaatcgcgcgctgtgacgccagcggtggtggagctgacgccagccgagcatcaa
atccaattgaaacacatgattgaccaaggacgattattcgaagctttccagagggcgctc
tacatgaacgacttgagtatggtaacgttcgtttgctcaaaagtcgatgccgggaaactc
ttcgcctcggatccttgcgtctttccaccacaaatccttttggcgttgatccagcaacta
tctgcagatcttggctcgtcgactgaattgaaattagaatatctccaagaagcactcttg
gctgtgaacactcaagatccgcagattaaggagcacgcacccaaggtgatgcctcaactg
gtggtgaatttgcatgcccagctggccaacaatctcagtgtcacactgcaacgtcaattg
cgcatgttactgcgctgtgccgagccattggctgcagccaagtag

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