Daphnia pulex (common water flea): DAPPUDRAFT_301523
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Entry
DAPPUDRAFT_301523 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DAPPUDRAFT_301523
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpx03032
]
DAPPUDRAFT_301523
03400 DNA repair and recombination proteins [BR:
dpx03400
]
DAPPUDRAFT_301523
DNA replication proteins [BR:
dpx03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
DAPPUDRAFT_301523
DNA repair and recombination proteins [BR:
dpx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
DAPPUDRAFT_301523
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
ECT2_BRCT0
TopBP1_BRCT0
Motif
Other DBs
NCBI-ProteinID:
EFX68227
JGI:
Dappu1_301523
UniProt:
E9HJ57
LinkDB
All DBs
Position
Unknown
AA seq
1305 aa
AA seq
DB search
MDAENSQFCVNIFCVMPNNSTEATCPKDLFRAHECCKENGFNVNWIQEEACMKLKPCKED
VFILSEFVGPLFEFLRQFKCTVIGPQCLLVSVNKGEPLPDVPTPVFTVAMKGIIVTTTGC
TPQEKKEIQEKVQFMGGLYSSAFSVNVTHLIVKSVADFSLKFKVAINRDIPVMIPNWVDA
VWNASLKESVHGTDPMFARYACPPFQGLVICVSQIPVKDREALKKIIEANGGRYSGQLEM
GKTNILITTSAEGEKYTYAKRWKIRCLKPEWIHTSLNKGYAADPDSFIVESKTTNPPRCS
TPEADHSVMKFGNSSINSTILNESRVQHIDETVGSTTSILSIQQSDSRTTEALDTLDLAI
SKKAGPFLDGCKVFISGFDGPHMEKLRRILNNAGVARFNSISESLSHVIVGKTVEEDWKQ
LQQLMHKPHVVTVEWVAQSLRLKRAAPEAAYLHPDFKNVIAPNKENASKKSIPEPSNNFQ
EDSQMVQQYLTTDHTEEEEVASLMNCPQGIFSGLTFQLFALDTETVSVMTDLILSNGGRV
VAKNGRYVVTEPVSHTAVLVDQDGTYTVVNTLWIEDCVDEERLVDIENCHHHIKVRDKLI
LDGYTVSYSGIQGRMRELLDILIVQLGGRPQETFSRKLMEEKKVYRSTHLVCAKTEGRKY
EKALEWGVPAVSAEWVIACATSSTRPKEEDYPPTGEPVKPQELEESVPTPETVVRPSRQP
AESVILKTLKQKQSETPSARRLPAHFDMSSPHNPVNSATPTMPPRPAVSDTPTCLQQNPI
SANNIGRTPQARPALFNMPTPDTPYGRLLNTDPSPGTRKQWKHALENRVRLTPREDESLN
VTPQDIQKGEIVVSPEDSDYFLNLRKKLRLDENGVEAQAMWKPDEENSAAASPLEPPKPP
FHGVVAFIHKKVEDQRTELVKAVENLGGRVRFQHCEEVTHFIYQGKLAASKEIRSAKDWH
QKFVSPQWILDCEDTSCRLEESHYPPSLNPKMALSLNFNSQPAPPSSCTQKRRLPASSSE
IGTPRIPSRKRLSSDSEPRENDLLETNEEQENLVVPDVEEEACKELLQLDQVLSRSAEQI
PLQKVTNVSVARNGRGPERVFVPATQPLETVDSQSAPIVWDLHETQKPTGSQLNNTQTYR
VMFSGMAQDDRDSCTAIIEELGGTVLESNQYDPTCTHLVVTKVGSNEKLLTSIAAGKWIL
HPEWLSESEKEKRFLEEAKFEWGNPEATVDYPESEFITEDEANIAAAAYYWRINRSQGVS
GGPFHGITAVLYLREKNASFQRLLEAGGGKVVDQGYDNKDVQSFL
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgaaaacagtcaattttgcgtaaacattttttgtgtaatgcccaataattcc
accgaggccacctgtcccaaagacttgtttcgagcccacgaatgttgcaaggaaaatggt
ttcaatgtaaattggattcaagaagaagcttgtatgaagttaaagccatgcaaagaagat
gtttttatcttgtctgagtttgttgggccattgtttgagtttcttcgacagtttaaatgc
actgtcattggcccacagtgcttactggtttctgttaataaaggagaacctctcccggat
gtccctacaccagtcttcactgttgcaatgaagggaatcattgtcaccacaacaggatgc
acccctcaagagaagaaggaaattcaagaaaaagtgcaattcatgggtggactttactca
tcagcgttttctgtaaatgtcacccatctcattgtgaagagtgtagctgattttagtttg
aaattcaaagtggccataaatagagacatccctgtcatgattcccaattgggttgatgct
gtatggaatgccagtctcaaagaaagtgtccatggaacagatcccatgtttgccagatat
gcttgccctccattccagggattggtcatatgtgtttcccagattccagtcaaggatcgc
gaagcccttaagaagatcattgaagctaacggtggaagatactctggtcagctcgaaatg
ggtaaaacgaatattcttattaccacctcggccgaaggagagaaatatacttatgctaaa
cgttggaagatacgttgccttaaaccagagtggatccacacttcattaaataaaggctac
gctgcggatccagactctttcatcgtggagtctaagactactaatcctcctagatgttca
actccagaagcagatcattccgtcatgaaattcggcaactcaagtatcaacagtaccatt
ctgaacgagagccgggttcaacatattgacgaaactgttgggtctacaacttctatttta
tccatccaacaatccgattctcgaaccacagaagccctcgacactttagatttggctatt
tctaagaaagctggaccttttctggatggctgtaaagtgtttattagtggttttgatggc
ccacacatggaaaaactaaggcgtattctcaataatgctggtgtagctcgctttaacagt
atcagcgaatcactatctcacgtcatcgttggaaaaactgttgaagaggattggaaacaa
ctccaacagttgatgcacaagcctcacgtcgtaactgtggaatgggttgcccagagtttg
agattaaaaagagccgctccagaagctgcatatttgcatcccgattttaagaacgtgatt
gctcccaacaaggaaaacgcctcaaagaaatctataccagaaccgtcaaataactttcag
gaggattcacagatggttcagcagtatttgacaacagaccatacagaagaagaagaggtt
gcatcattaatgaactgccctcaaggcatattttctggcttaactttccaactttttgca
ttggatactgaaactgtttcggttatgactgatcttattttaagcaacggtggtcgtgtg
gtagcaaagaacggaaggtacgtagttaccgaacctgttagccacaccgctgtgcttgtg
gatcaagatggaacgtatactgtggtcaacactttgtggattgaagattgcgttgatgaa
gagcgcttagtggacatcgaaaattgtcaccaccacatcaaagtcagagacaaactaatt
ctggacggctacaccgtttcttacagcggcattcaaggtcgaatgagagaattgctagat
attctaattgtccagcttggtggtcgaccacaagagactttttctcggaaattgatggaa
gaaaaaaaagtataccgctctactcacctcgtttgtgccaaaacagaaggaaggaaatac
gaaaaggcccttgagtggggtgttccggccgttagcgctgaatgggtcattgcttgtgcc
acctctagcacacgacctaaggaagaagattatcctccgacaggtgaacctgttaagcca
caagaactggaagagtctgttccaactcccgaaactgttgtcaggccctctcgacaacct
gcagagtctgtcattttgaagactttgaagcagaaacagtcagaaacacctagtgcccgc
cgtttaccggctcactttgatatgtcttcgccgcataacccagtgaactcagcgactcct
accatgccaccacggccggctgtctctgacactcctacgtgtttacagcagaatccgatt
agtgcaaataatattggtagaacacctcaagctcgaccagctctttttaacatgcctaca
cccgatacaccatatggaaggcttttaaacacggacccgtcacccggcacgcgaaaacag
tggaaacatgcattggaaaatcgagttcgtttgacgcctcgcgaggacgaatcccttaac
gttaccccacaagatattcagaaaggagaaattgtggtctcccccgaagactcagattat
ttcttgaatttacggaaaaaattacgtcttgatgaaaatggagttgaagcacaagccatg
tggaaaccggatgaggaaaattcagcggcagcatcacccttagaaccaccaaagccacct
tttcatggagtggtggcattcatacacaagaaagttgaagaccaacgaaccgagttggta
aaagcagttgaaaatctaggtggccgggttcgtttccaacactgcgaggaggtaactcat
ttcatatatcagggcaagctagctgcatccaaagagattcgaagcgcaaaagattggcac
cagaaatttgtctcacctcagtggatcctagactgtgaagatacttcgtgtcgtctagaa
gaatcgcattatccaccatctttgaatccgaaaatggctttgtcactgaatttcaattcg
caacctgcaccgccgtctagttgtacccagaagcgacgccttcctgccagttccagcgaa
ataggtactcctagaattccttcccgtaagcgcttatcatctgatagtgagccacgtgag
aacgaccttcttgaaactaatgaagaacaagagaaccttgtcgtcccagacgtagaggaa
gaagcatgcaaagaacttttgcaactagaccaagtgctatcacgttcagctgagcagatt
cctctgcaaaaggttacaaacgtttcggtggctagaaacggtagaggacctgaacgcgtc
tttgttcccgcaacgcaacctctggaaacggtagattcgcaatctgctccaattgtgtgg
gatcttcacgagacacaaaagccaaccggttcacagctaaacaatactcagacatatcgt
gtcatgttctctggaatggcacaagacgatcgtgacagctgtactgctattatcgaagag
ttgggaggaaccgttcttgaatccaaccaatacgacccaacgtgtactcaccttgtcgtc
accaaagttggatctaacgaaaagctgttgacatcgatcgctgctggaaaatggatcctt
catccagaatggctgagtgaaagcgaaaaagaaaaacgtttccttgaggaagctaaattt
gaatggggcaatccagaagccacggtggattacccagaatccgaattcattaccgaggac
gaagctaacattgctgcggctgcatattattggcgtattaatcgcagtcaaggagtatct
ggtggaccttttcacggaattaccgctgttttataccttcgcgagaaaaatgcttctttc
cagcgtttacttgaagctggtggcggaaaggtggttgaccaagggtatgataataaggac
gttcagagttttctttaa
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integrated database retrieval system
