Daphnia pulex (common water flea): DAPPUDRAFT_301602
Help
Entry
DAPPUDRAFT_301602 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K12881
THO complex subunit 4
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03013
Nucleocytoplasmic transport
dpx03015
mRNA surveillance pathway
dpx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DAPPUDRAFT_301602
09122 Translation
03013 Nucleocytoplasmic transport
DAPPUDRAFT_301602
03015 mRNA surveillance pathway
DAPPUDRAFT_301602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpx03019
]
DAPPUDRAFT_301602
03041 Spliceosome [BR:
dpx03041
]
DAPPUDRAFT_301602
Messenger RNA biogenesis [BR:
dpx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
DAPPUDRAFT_301602
TREX complex
DAPPUDRAFT_301602
Spliceosome [BR:
dpx03041
]
Complex C
Other components
EJC/TREX
DAPPUDRAFT_301602
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
DAPPUDRAFT_301602
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-ProteinID:
EFX83713
JGI:
Dappu1_301602
UniProt:
E9GAA9
LinkDB
All DBs
Position
Unknown
AA seq
250 aa
AA seq
DB search
MGDKVDMSLDDIIKTNRSAGRGRGGRGGRGGSSRGGNRNAGSGPVRNQRQGNAGGRAAPY
AKGNPDGDWSHDMYEGGPRKSNPRLGAAPNAAGGGSSKLVVSNLDFGVSDADIKELFMEF
GPLKHASVHYDRSGRSLGTADVVFERRLDAVKAMKQYNGVPLDGRSMVIQMATSDLNTIA
NRLTSPRANTNNGPQQKRTGAPASNRGQRGGGQRGQRGGAGGARQRNPKQPAPTADELDA
ELESYRSELK
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacaaagttgacatgagcttggatgatatcatcaaaactaaccgttcagccggc
cggggccgtggaggacgcggcggtcgaggtggcagttctcgtggaggcaaccgtaatgcc
ggctcaggacccgttcgtaatcaaagacagggaaatgctggaggtcgtgctgcgccttac
gcaaagggcaacccagatggtgactggtctcatgacatgtatgaaggtggaccaaggaaa
agcaatcccaggcttggtgctgcaccgaatgctgctggaggcggctcttccaaacttgtt
gtttctaacttagactttggtgtgtcagatgcagacattaaggaactttttatggaattt
ggaccattgaaacatgcttctgtgcattatgacagatcaggcagatctctcggtacagct
gatgttgtgtttgagcgccgtcttgatgctgtcaaggcaatgaaacagtacaacggagtc
ccattggatggtcgatcaatggtcattcagatggctacatccgatttgaacacaatcgcc
aaccgactgaccagccctcgagctaacactaacaacggaccgcaacaaaagaggactggt
gcgccagcttccaacagaggccagagaggaggaggccagcgtggtcagcgaggtggtgct
ggtggcgctcgccaacgcaatcccaaacagcctgcaccgacagcagatgagctcgatgcc
gagttggagtcatacaggagtgaattgaaataa
DBGET
integrated database retrieval system