Daphnia pulex (common water flea): DAPPUDRAFT_301682
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Entry
DAPPUDRAFT_301682 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K10755
replication factor C subunit 2/4
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03030
DNA replication
dpx03410
Base excision repair
dpx03420
Nucleotide excision repair
dpx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DAPPUDRAFT_301682
03410 Base excision repair
DAPPUDRAFT_301682
03420 Nucleotide excision repair
DAPPUDRAFT_301682
03430 Mismatch repair
DAPPUDRAFT_301682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpx03032
]
DAPPUDRAFT_301682
03036 Chromosome and associated proteins [BR:
dpx03036
]
DAPPUDRAFT_301682
03400 DNA repair and recombination proteins [BR:
dpx03400
]
DAPPUDRAFT_301682
DNA replication proteins [BR:
dpx03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
DAPPUDRAFT_301682
DNA Replication Termination Factors
ELG1-RFC complex
DAPPUDRAFT_301682
Chromosome and associated proteins [BR:
dpx03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
DAPPUDRAFT_301682
DNA repair and recombination proteins [BR:
dpx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
DAPPUDRAFT_301682
Check point factors
HRAD17(Rad24)-RFC complex
DAPPUDRAFT_301682
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA_30
AAA_24
AAA_11
AAA_assoc_2
AAA_22
AAA_16
ResIII
Mg_chelatase
SLFN-g3_helicase
RuvB_N
DUF815
DNAX_ATPase_lid
AAA_5
AAA_19
AAA_7
Viral_helicase1
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
EFX68037
JGI:
Dappu1_301682
UniProt:
E9HJL3
LinkDB
All DBs
Position
Unknown
AA seq
356 aa
AA seq
DB search
MDSFLKTGKLSNQSKGSGVPLLPGNVEEKKHSLIPWVEKYRPRTIDEVSYQEEVVAVLQK
SLQGADLPNLLFYGPPGTGKTSTILAAARDLFGDIYKDRVLELNASDERGIQVVREKVKI
FSQRTVSSVRPDGKQCPPFKIVILDEADSMTGAAQAALRRTMEKETKSTRFCLICNYVSR
IIEPLTSRCSKFRFKPLPREILVKRLEHICIAENMSCSEEVLESLIEASEGDLRRAITFL
QSIANLNSEACPTIEDIYEITGRVPSCWIEGLLEKCTSGSYDAMQSFINNFSAEGFSVSQ
LLNQLHERIVFSTELSSKQKNVICEKLAICDHRLAEGADEQLQLLDLSCTIMNSFQ
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggattcatttttaaaaactggaaagctctctaatcagtccaagggaagtggagtgcca
ttacttcctggaaatgttgaagaaaaaaagcattctttaataccttgggtcgagaaatac
cgtcctcgaacaattgatgaagtttcatatcaggaagaagtagttgcagtacttcaaaaa
tcactccaaggagctgaccttccaaatctgcttttctatggtccacctggtactggtaaa
accagcaccattttagcagctgcccgagatctttttggtgatatttacaaggatagggtt
ttggaattgaatgcatcagatgaacgaggtatccaagttgtaagagaaaaagtcaagatt
ttctctcaaagaactgttagctcagttagacctgatggaaaacaatgccctcctttcaaa
attgtgattttggatgaagcagattctatgacaggtgctgcacaagcggctctccgccga
accatggagaaggagacgaaatcgactcggttttgcctcatttgtaactacgtaagccgc
atcatagagcccttaacgtcaagatgctccaagtttagatttaaaccactccctcgcgaa
attttggtcaaaagactagaacatatatgtattgctgaaaatatgtcatgctcagaagaa
gttttggaaagtttaatcgaagcatctgaaggggatcttcgaagggcgattacttttctt
caatctatcgccaatttgaattctgaagcatgccctaccattgaagacatctatgaaatt
acagggagagtgccaagttgttggattgaaggcctgcttgaaaaatgtacttccggatca
tatgatgcaatgcagtcatttatcaacaatttttcggctgagggattttcggtttcccag
cttcttaaccaactgcatgaacgaatcgtcttttccacagaactttcatccaagcagaag
aacgtgatatgcgaaaagctggcgatttgtgatcaccgtttggcggaaggagctgatgaa
caacttcagttgttagatcttagctgtaccatcatgaattcgttccaatag
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