Daphnia pulex (common water flea): DAPPUDRAFT_302037
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Entry
DAPPUDRAFT_302037 CDS
T04347
Symbol
CTCF
Name
(GenBank) putative CCCTC-binding factor protein
KO
K23195
transcriptional repressor CTCF
Organism
dpx
Daphnia pulex (common water flea)
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dpx03000
]
DAPPUDRAFT_302037 (CTCF)
03036 Chromosome and associated proteins [BR:
dpx03036
]
DAPPUDRAFT_302037 (CTCF)
Transcription factors [BR:
dpx03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
DAPPUDRAFT_302037 (CTCF)
Chromosome and associated proteins [BR:
dpx03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
DAPPUDRAFT_302037 (CTCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-met
zf-H2C2_5
zf-C2H2_jaz
Zf-C2H2_ZNF451_C
zf-C2H2_15
Ldl_recept_b
zf-C2H2_7th_ZNF462
zf-C2H2_6
Motif
Other DBs
NCBI-ProteinID:
EFX67330
JGI:
Dappu1_302037
UniProt:
E9HLQ9
LinkDB
All DBs
Position
Unknown
AA seq
700 aa
AA seq
DB search
MAALKQEEESISEIQNYLDTFNKEIEDPNQIPGSQLANKEAVVSNEVEAADAPEDGGTYF
VDQSGQYYYQSNDVDGGDGTATLVAQDGGTMVSIPNNGTSADEGVVLAQGEGGYQTVTIL
PPESSSGEVSYVLIVQQPDGAEQAVISSEVLDGTEGEVIQEDEEAEDDENFDGDEDKDED
QNLAVYDFDEGEEGGSADGQDSEDEDIKPRMSKGGSKKVTQTVSQAHMCNYCNYTSPKRY
LLSRHMKCHSEERPHKCSVCDRGFKTLASLQNHVNTHTGTKPHRCKHCHSSFTTSGELVR
HVRYRHTHEKPHRCTECDYASVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLR
IHTGEKPYECDICHARFTQSNSLKAHKLIHTGNKPIFQCELCPTTCGRKTDLRIHVQKLH
TSEKPLKCKRCGKSFPDRYTFKLHSKTHEGEKCFKCDLCAYASISQRHLESHMLIHTDQK
PYQCDQCDQCFRQKQLLRRHQNLYHNPDYVPPPPGEKRHECPECGKPFRHKGNLIRHLAL
HDPDAAQQELRAFRAARKQRIKDGQSLEGLTEGEETDMEDEDISLGLNSNEELVSVQGQD
GQQYVVLEVIQLEGEGGDEDEATMMEVEGATEMDGSLMEGEGNTMTSLDDEIEDSMQATP
RVRRSSQVAKAQDTSKDVANCFGFDDDEDDEEDEEEEDEK
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttgaagcaagaggaagaatctataagtgagatccaaaattatctcgacaca
ttcaacaaggaaattgaagatcccaatcagatacctggttcccagctagctaacaaggaa
gctgttgtttcaaacgaagtagaagctgctgatgcacctgaagatggtggaacttatttt
gtagaccaaagtggacagtattactatcaaagtaatgatgttgatggaggagatggtaca
gcaacgcttgttgcccaagatggaggtactatggtatccattcccaataatgggacttca
gcagatgaaggggtagtgcttgcacagggagaaggtggctaccaaactgtcactatatta
cccccagaatcatcttctggtgaagttagctatgttttgattgtccagcagcctgatggt
gctgaacaagctgtcatttcatctgaagttcttgatggtactgaaggagaagttatacaa
gaagatgaagaagccgaagatgacgagaactttgatggtgatgaggataaagacgaggac
caaaacctagcggtttatgatttcgacgaaggcgaagaaggtggtagtgctgatggtcag
gattccgaagatgaagatattaagccaaggatgagcaaaggtggctccaaaaaggtcaca
cagaccgtctcccaggcgcatatgtgtaactactgcaactacactagcccaaagcgatat
ctgctgtctcgacacatgaagtgtcactcagaagagcgtccgcacaagtgcagtgtatgt
gatcggggattcaagacgttggcttcgctacagaaccatgtcaacactcacacgggcact
aagccacatcgatgcaaacattgccacagttcgttcacaacttcaggtgagcttgtccgt
cacgtacgttaccgccacacacacgagaaaccacatcgttgcaccgagtgcgactacgct
tccgttgaattaagcaagctcaagcgtcatatgcggtgccatacgggtgagcgaccctac
cagtgccctcactgtacgtatgccagcccggacaccttcaagttgaagcgccacttgcgc
atccatactggcgaaaaaccctacgagtgcgatatttgccatgcgcgattcacacaatcc
aacagtctcaaggctcacaaactcattcacacaggcaacaaaccaattttccagtgtgaa
ctatgtccaaccacttgtggccgaaagactgacctacggatccacgttcagaaattgcac
acctctgaaaagcctttaaaatgcaaaagatgtggcaaatcgttccccgatcgttatact
ttcaaattgcacagcaaaactcacgaaggagaaaaatgcttcaagtgcgatctttgtgct
tacgcgtcgatctctcaacgccatttggaatcacatatgctgattcacacggaccagaaa
ccttaccagtgcgatcagtgcgatcagtgcttccggcaaaagcagttgttacgtcgtcac
caaaacttgtatcacaatcccgactacgtgcccccaccgcctggagagaaacggcatgag
tgccctgaatgtggaaaacccttccgccacaaaggcaatctgattcgccatttggctctc
cacgatcctgatgccgctcagcaagaattgcgagcattccgcgcggctcgtaaacagcga
attaaggatggccagagtttagaaggtcttaccgaaggcgaagagactgatatggaggat
gaagacattagccttggtctcaactctaatgaagagctggtctcggtacaaggtcaagat
ggacagcagtatgttgtccttgaagtgattcaattagagggtgaaggtggagacgaagat
gaggccaccatgatggaagtagaaggagcgaccgaaatggatggttccctgatggaagga
gaaggaaatactatgacctccttggatgatgaaattgaagattccatgcaagccacccct
cgcgttcgtcgtagctctcaggttgctaaagctcaggatactagcaaggatgtggctaat
tgttttggattcgacgacgatgaagacgacgaagaagatgaggaggaggaagatgaaaag
tga
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