KEGG   Daphnia pulex (common water flea): DAPPUDRAFT_302853
Entry
DAPPUDRAFT_302853 CDS       T04347                                 
Name
(GenBank) hypothetical protein
  KO
K13218  polypyrimidine tract-binding protein 1
Organism
dpx  Daphnia pulex (common water flea)
Brite
KEGG Orthology (KO) [BR:dpx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dpx03019]
    DAPPUDRAFT_302853
   03041 Spliceosome [BR:dpx03041]
    DAPPUDRAFT_302853
Messenger RNA biogenesis [BR:dpx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     DAPPUDRAFT_302853
Spliceosome [BR:dpx03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    DAPPUDRAFT_302853
SSDB
Motif
Pfam: RRM_5 RRM_1 RRM_8 RRM_occluded RRM_10 CCP_MauG
Other DBs
NCBI-ProteinID: EFX81898
JGI: Dappu1_302853
UniProt: E9GEU6
LinkDB
Position
Unknown
AA seq 540 aa
MSNGAVLSPQSNHADNNNDAKKVKLEPRSPAKPSRVVHIRNIPNDVTEAEIVHLGIPFGR
VTNVLVLKGKNQAFLEMADEGAAISMVNYFSSGTSAQLRGRNVFVQYSNHVALKTDQSHS
NAVRFINLFFEFSVSIDGSFSAAAQAALQAAQALAGQTETQGGPNTVLRVIVEHMVYPVT
LDVLFQIFSKVGRVLKIVTFTKNNTFQALIQYPDVVTAQAAKLTLDGQNIYNSCCTLRIE
YSKLSSLNVKYNNDKSRDYTNPTLPTGDHNLDAFAMTGGAGVLASPFQAMHGLASPLTAA
YGSASVGGGGGDFILPSGFSLPGGSASAALGPAALRLSGQQCSSGAVLLVSNLNEEMVTP
DALFTLFGVYGDVHRVKILFNKKDTALIQMAEPHQAQLAMTHLDKLKLYGKQLRAMPSKH
QGVQMPKEGQPDAGLTKDFINSALHRFKKPGSKNYQNIYPPSSTLHLSNIPPNVTEEEIK
NAFTAANFAPQAFKFFPKDRKMALIQLGSVEEAVAALIKMHNYQLSDSSHLRVSFSKSTI
NT seq 1623 nt   +upstreamnt  +downstreamnt
atgagcaacggcgctgtactcagcccccaatccaatcacgccgataacaacaacgacgcc
aagaaggtcaaactggagccgagaagtccagccaaaccgtctagggtcgtccatatccgc
aacatccccaacgacgtgacggaggctgaaatcgtccacctgggcattccatttggacgc
gtcaccaacgttctcgtcctcaagggcaaaaatcaggcgtttttggagatggcggatgaa
ggtgctgcaatttcgatggtcaattacttcagcagcggaacgtcggctcagctgcgtggc
cgcaacgtctttgtccagtactcgaaccatgtcgccctcaagacggaccagtcccactct
aacgctgtacgtttcattaatctttttttcgagtttagtgtgtcaattgacggttcgttt
agtgctgctgctcaagctgctctccaagccgctcaagcccttgccggccagacggagact
caaggcggacccaacaccgtcctccgcgtcatcgtcgagcatatggtttaccccgtcacc
ctagatgttctctttcagatcttttccaaagtcggacgggtgctgaagatcgtcactttc
accaagaacaatacattccaggccctgatccaatatccggatgttgtcactgcacaggcg
gctaaactgacgctggacggacagaatatttacaactcttgctgcacgttgcgcatcgaa
tactctaaattgagcagcctcaacgtcaagtacaacaacgacaagagccgcgattacact
aaccccacgctgccaactggcgaccacaatttggacgctttcgccatgactggtggcgcc
ggagtgctggcctcccctttccaagccatgcatggcctcgcatcgcccttaaccgcagct
tacggctctgcatcggtcggaggtggcggaggtgatttcatcttaccaagtggtttcagt
ttgcctggaggttcggcttcggccgctctgggtccagcagctcttcgtctttcgggccag
caatgttcgtctggagccgtcctgctcgtctcgaatctcaacgaggagatggtcacgcct
gatgctctcttcactctcttcggtgtttacggtgatgtccaccgggtgaagatcctgttc
aacaaaaaggatacggcccttattcaaatggccgaaccgcatcaagcccaacttgcgatg
actcacctggacaagctgaaactttacggcaaacagttgcgagctatgccgtctaagcac
cagggcgtccagatgcccaaagaaggacaaccggatgccggtctgaccaaggactttatc
aactcggctcttcatcgcttcaagaagcccggcagcaagaattatcagaatatctacccc
ccttcatctactctccatctgtcgaatattccgccgaatgtcactgaggaggagattaaa
aatgccttcaccgcggctaactttgccccacaggcctttaaattcttccctaaggaccgg
aagatggcgttgattcaacttggtagcgtcgaagaagccgttgctgctcttattaaaatg
cacaactatcagctcagcgactcgagccacttgcgagtctccttctccaagtcgaccatt
taa

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