Daphnia pulex (common water flea): DAPPUDRAFT_302853
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Entry
DAPPUDRAFT_302853 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K13218
polypyrimidine tract-binding protein 1
Organism
dpx
Daphnia pulex (common water flea)
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpx03019
]
DAPPUDRAFT_302853
03041 Spliceosome [BR:
dpx03041
]
DAPPUDRAFT_302853
Messenger RNA biogenesis [BR:
dpx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
DAPPUDRAFT_302853
Spliceosome [BR:
dpx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
DAPPUDRAFT_302853
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_10
CCP_MauG
Motif
Other DBs
NCBI-ProteinID:
EFX81898
JGI:
Dappu1_302853
UniProt:
E9GEU6
LinkDB
All DBs
Position
Unknown
AA seq
540 aa
AA seq
DB search
MSNGAVLSPQSNHADNNNDAKKVKLEPRSPAKPSRVVHIRNIPNDVTEAEIVHLGIPFGR
VTNVLVLKGKNQAFLEMADEGAAISMVNYFSSGTSAQLRGRNVFVQYSNHVALKTDQSHS
NAVRFINLFFEFSVSIDGSFSAAAQAALQAAQALAGQTETQGGPNTVLRVIVEHMVYPVT
LDVLFQIFSKVGRVLKIVTFTKNNTFQALIQYPDVVTAQAAKLTLDGQNIYNSCCTLRIE
YSKLSSLNVKYNNDKSRDYTNPTLPTGDHNLDAFAMTGGAGVLASPFQAMHGLASPLTAA
YGSASVGGGGGDFILPSGFSLPGGSASAALGPAALRLSGQQCSSGAVLLVSNLNEEMVTP
DALFTLFGVYGDVHRVKILFNKKDTALIQMAEPHQAQLAMTHLDKLKLYGKQLRAMPSKH
QGVQMPKEGQPDAGLTKDFINSALHRFKKPGSKNYQNIYPPSSTLHLSNIPPNVTEEEIK
NAFTAANFAPQAFKFFPKDRKMALIQLGSVEEAVAALIKMHNYQLSDSSHLRVSFSKSTI
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacggcgctgtactcagcccccaatccaatcacgccgataacaacaacgacgcc
aagaaggtcaaactggagccgagaagtccagccaaaccgtctagggtcgtccatatccgc
aacatccccaacgacgtgacggaggctgaaatcgtccacctgggcattccatttggacgc
gtcaccaacgttctcgtcctcaagggcaaaaatcaggcgtttttggagatggcggatgaa
ggtgctgcaatttcgatggtcaattacttcagcagcggaacgtcggctcagctgcgtggc
cgcaacgtctttgtccagtactcgaaccatgtcgccctcaagacggaccagtcccactct
aacgctgtacgtttcattaatctttttttcgagtttagtgtgtcaattgacggttcgttt
agtgctgctgctcaagctgctctccaagccgctcaagcccttgccggccagacggagact
caaggcggacccaacaccgtcctccgcgtcatcgtcgagcatatggtttaccccgtcacc
ctagatgttctctttcagatcttttccaaagtcggacgggtgctgaagatcgtcactttc
accaagaacaatacattccaggccctgatccaatatccggatgttgtcactgcacaggcg
gctaaactgacgctggacggacagaatatttacaactcttgctgcacgttgcgcatcgaa
tactctaaattgagcagcctcaacgtcaagtacaacaacgacaagagccgcgattacact
aaccccacgctgccaactggcgaccacaatttggacgctttcgccatgactggtggcgcc
ggagtgctggcctcccctttccaagccatgcatggcctcgcatcgcccttaaccgcagct
tacggctctgcatcggtcggaggtggcggaggtgatttcatcttaccaagtggtttcagt
ttgcctggaggttcggcttcggccgctctgggtccagcagctcttcgtctttcgggccag
caatgttcgtctggagccgtcctgctcgtctcgaatctcaacgaggagatggtcacgcct
gatgctctcttcactctcttcggtgtttacggtgatgtccaccgggtgaagatcctgttc
aacaaaaaggatacggcccttattcaaatggccgaaccgcatcaagcccaacttgcgatg
actcacctggacaagctgaaactttacggcaaacagttgcgagctatgccgtctaagcac
cagggcgtccagatgcccaaagaaggacaaccggatgccggtctgaccaaggactttatc
aactcggctcttcatcgcttcaagaagcccggcagcaagaattatcagaatatctacccc
ccttcatctactctccatctgtcgaatattccgccgaatgtcactgaggaggagattaaa
aatgccttcaccgcggctaactttgccccacaggcctttaaattcttccctaaggaccgg
aagatggcgttgattcaacttggtagcgtcgaagaagccgttgctgctcttattaaaatg
cacaactatcagctcagcgactcgagccacttgcgagtctccttctccaagtcgaccatt
taa
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