Daphnia pulex (common water flea): DAPPUDRAFT_303123
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Entry
DAPPUDRAFT_303123 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
dpx
Daphnia pulex (common water flea)
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dpx03016
]
DAPPUDRAFT_303123
Enzymes [BR:
dpx01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
DAPPUDRAFT_303123
Transfer RNA biogenesis [BR:
dpx03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
DAPPUDRAFT_303123
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ELP3_N
Radical_SAM_C
Radical_SAM
Acetyltransf_7
Acetyltransf_10
Acetyltransf_1
FR47
Motif
Other DBs
NCBI-ProteinID:
EFX89246
JGI:
Dappu1_303123
UniProt:
E9FSS1
LinkDB
All DBs
Position
Unknown
AA seq
547 aa
AA seq
DB search
MPPAEYSKFSLIELSVLAISDIIQELLKAHESGKDLNLNKIKTQISSKYGLPSTPKLVDI
IAAVPLEHRKILVPKLKAKPIRTASGIAVVAVMCKPHRCPHINMTGNICVYCPGGPDSDF
EYSTQSYTGYEPTSMRAIRARYNPYLQTRQRVEQLKQLGHSVDKVEFIVMGGTFMSLPED
YRDYFIRNLHDALSGHTSSDVNQAVEYSERSLTKCIGITIETRPDYCLKRHQSDMLKYGC
TRLEIGVQSVYEDIARDTNRGHTVKAVCESFHLGKDSGFKIVSHMMPDLPNIGLERDIDQ
FIEFFENPLFRADGLKIYPTLVIRGTGLYELWKTGRYRSYHPNVLVDLVAKILALVPPWT
RIYRVQRDIPMPLVSSGVENGNLRELALARMVEFGIDCRDVRTREVGIQEVHHKVRPYEV
ELIRRDYVANGGWETFLSYEDPEKDILIGLLRLRKCSPQAFRPELQGGVSIVRELHVYGS
VVPVSGRDPRKFQHQGFGTLLMEEAARISKEEHKSFKIAVISGVGTRNYYRKLGYELEGP
YMTKLLK
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgcctccagctgaatattccaagttttcgctcattgaattgtctgtgctggcaatcagt
gacattattcaagaactattaaaagctcatgagagtggaaaagatctgaaccttaataag
atcaagacacagatttcttccaaatatggtttgccatctacaccaaagttggttgacatc
atcgctgcagtaccccttgaacacaggaaaattttggttcccaaactgaaagccaaacca
attcgaacagctagtgggattgctgttgtcgctgttatgtgtaagcctcaccgatgtcct
cacattaatatgactggaaacatatgtgtgtactgtcctggaggacctgattcagacttt
gaatattctactcaatcctacactggttacgagccaacctctatgcgtgccatcagagcc
aggtacaacccgtatcttcaaacacgacaaagagttgaacagcttaagcagcttggccat
agtgtggacaaggtagagttcatagtaatgggaggaactttcatgtcgcttccggaagat
tacagggattatttcatcagaaacttgcatgacgctctatcgggtcatactagcagtgat
gtgaatcaggctgtggaatactctgaaagaagcctgactaaatgcatcggaatcacgatc
gaaacacgacccgattactgtttgaaacgacaccagtctgatatgttgaaatatggctgc
acgcgattagaaattggggttcagtcggtttacgaagacatagcgcgagacacaaaccga
ggccacactgttaaggctgtgtgtgaaagctttcatttgggaaaagattctggtttcaaa
attgtttctcacatgatgccagatttgcccaacatcggtttagaaagagatattgatcaa
ttcattgaattttttgagaatccactgtttagagctgatggattaaaaatttatcctaca
ctggttattcgaggaactggtctgtacgagctctggaaaacaggccgttaccggtcctat
catccgaatgttttagtcgacctcgttgcaaaaattttggcattggtacctccatggact
cgaatttaccgagtacaaagagatattcctatgccacttgtaagctctggagtagaaaac
ggtaaccttcgcgaattggcattagcgagaatggtcgaatttggaatcgattgcagagat
gtcaggactagagaagtaggaattcaagaagtgcatcataaagtccgtccttatgaagtc
gaattgattcgtcgagactacgtcgctaatggtggatgggaaacgttcctttcgtatgaa
gatccagaaaaagatattttgatcggtttgttacgactacgcaaatgttcgccacaggct
ttccgccccgagttacaaggaggagtatcaattgttcgagagctacacgtttatggcagt
gttgtaccggttagtggcagagacccgagaaaatttcaacaccagggtttcggaacactt
ttgatggaggaagcggcacgcatatccaaagaagagcacaaatccttcaaaattgccgtt
atctccggagttgggactcgaaattattaccgaaaattgggttacgaacttgaaggccct
tacatgacgaaattgctgaaatag
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