Daphnia pulex (common water flea): DAPPUDRAFT_303234
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Entry
DAPPUDRAFT_303234 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DAPPUDRAFT_303234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpx03009
]
DAPPUDRAFT_303234
Ribosome biogenesis [BR:
dpx03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
DAPPUDRAFT_303234
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
Beta-prop_WDR35_2nd
Beta-prop_RIG_2nd
Beta-prop_HPS5
Motif
Other DBs
NCBI-ProteinID:
EFX89548
JGI:
Dappu1_303234
UniProt:
E9FU09
LinkDB
All DBs
Position
Unknown
AA seq
907 aa
AA seq
DB search
MTDKAENHESFLDASRIFTGHRALGLVSNHIPLVTRYIPKRKETLIVTVIGNSFHTYGST
KLNLLSIGRAHEDDITCLAADTYRVFTASGHIIKVWRRSTELSKEFKGHEKPIHLMLPFG
QHLLAVDETNNLKVWDINAAEVSFELDFNPDTFSISAMVHPVTYLNKILFGSMQGTMQLW
NLKTGKMVFAFNGWKSQITILEQAPAVDVVAVGLASGEMCLHNLKFDETLIKFKQDWGPI
TALTFRTDGAPIMITGSSQGHLAIWDLEQQTLIQQHRHAHRGAVTGLKALASEPIIITSS
PDNSLKMWIFDQSDGGVRLLRDRGGHKAPPIRLRFHDLLGEWILSTGLDSSLRTFSTVAD
LLHRNLGTAHYNQKKARRVGLEKAGPKMPPITNFASDSVRDKEWDSIAAVHRHQSEVTTW
SFHRQTMGEHKLTHKRFAEDMALKKTSATCVTITACGNFAIVGYDSGHIDRYNMQSGIHR
ATYLRLDTEESSKLPFTRNAVRGVVSDGLNQVVLGAFTNGQLTTWNFKSVEIVRETNLNA
APSFIQINRHSGLLAIAMEDFTIIIVEVETGNIVRRLTGHDGRLTDLAFSPDARWLVSSA
QDCSIRTWDLPTGTCIDYFLLPKSCVSLTFSASGSFLATAHVDDLGIYLWNNQSLYTQVS
LRALEKDFEPKTAPLPGSAVKSGESEIEDSEQIEEEEEFSSPEQIADALVTLSLLPDSRW
KNLLSLDAIKRRNRPKEAPKLQKLAPFFLTNTNSLPSADGQKDSGSRILNTFSSPFAMPL
TPWAEKLNSAEKPEEYWAVIEELKGMGPSAIDTEIRSLSPHLGGSTHLLSQFLTSITLVL
ESKRNYEIVQAYLGLFLKVHGSSLSEEHELCARAEKVSGVLKDSWSTLQTNFESTLCLVS
FFMNAVI
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgacggataaagcagaaaatcacgaaagttttttagatgcgagtcgaatatttactgga
catcgtgcgctgggacttgtcagtaaccacattccgttggttacaagatatattccaaag
aggaaggaaacactcattgttacagtcattggtaactctttccacacttacggatccacc
aaactgaatctcctaagtattggaagagcacatgaagatgacatcacatgtcttgcagct
gatacctaccgggttttcacagccagtggtcacattatcaaagtatggagaagaagtact
gaactttccaaagagtttaagggacatgaaaaacccattcatttgatgctgccatttggt
cagcatcttcttgctgttgatgagacaaacaaccttaaagtttgggatatcaatgcagct
gaagtcagctttgagctagacttcaatcctgatactttttccatttctgctatggtgcat
cctgtgacatacctaaacaaaattttgtttggaagtatgcaaggtactatgcaattatgg
aatctaaagactggcaagatggtttttgcattcaatgggtggaagagtcaaatcactatc
ctggaacaagcccctgctgttgatgttgtggctgtaggactggcttcaggagaaatgtgt
ttgcacaacttgaaatttgacgagactttgataaagttcaaacaagactggggaccaatc
acagctctaacattcagaactgatggtgctcctattatgatcactggaagtagccaaggt
catctggctatttgggatctagaacaacagaccctcattcaacagcatcgtcatgctcat
cggggagcagtcactggtttgaaagctttagcctcagaaccaatcatcattacgtcttct
cctgataattcgttgaagatgtggatttttgatcaatcagacggaggagtacgattgctc
cgtgatcgtggaggccataaagctccaccaatccggttgcgctttcatgatctccttggc
gaatggattctgtcaactggattagattcttcgctgcgaacgttctcaaccgttgctgat
cttcttcaccgaaatttaggcactgcgcactacaatcaaaagaaagccagacgggtcgga
ttagaaaaggccggcccaaaaatgcctccaattaccaactttgcatctgattcggttcga
gacaaggaatgggattctattgcagctgttcatcgtcatcagtcagaggtgactacatgg
tcattccatcgacaaacaatgggcgaacataagctgacacacaaacgctttgcagaggac
atggctttaaaaaagacatctgcgacttgtgttaccattacggcttgcggaaattttgcc
attgttggttatgactcaggccatattgatcgttacaatatgcaatcaggaattcatcgt
gccacatatcttcgcttagatactgaagagtcgtctaaattgccgtttactcgtaacgcc
gttcgaggggttgtctcggatggtttaaatcaggtagttttgggagccttcacaaatggc
cagttaactacatggaacttcaagtctgtagaaattgtaagggaaacaaatctaaatgct
gcacctagctttattcaaattaatcgacacagtgggcttttggctatcgcgatggaagac
tttacgatcatcattgtggaagtcgagaccggaaatattgttcgacgacttactggacat
gatgggcgattgacggacttggcctttagtccggatgctaggtggttggtatcatccgca
caggattgcagtattcgaacgtgggacttgcctactggaacgtgcatagattattttctt
ctgcccaaatcttgtgtttctctgactttcagcgcgagtggcagttttttagccacagcg
catgttgatgatcttggcatttatctgtggaacaaccagtcactctacacgcaagtttca
ttgcgggcactggaaaaagattttgaaccgaaaacggctcccctaccaggatccgctgtc
aagagcggtgaatctgaaattgaagacagcgagcaaattgaggaggaggaagagttctcc
tcgccggaacaaattgctgatgctcttgttactctttctctacttcctgattccagatgg
aagaaccttcttagccttgacgctatcaaaagacgaaacaggcctaaagaagcaccgaag
ttgcagaaacttgccccttttttcttaaccaacacaaacagccttccatccgcagatggt
cagaaagactcgggttcgcgtattttgaacacattcagctcaccttttgcgatgccgtta
accccgtgggctgagaaattaaacagtgccgagaaaccagaagaatactgggctgttata
gaagaactcaaaggaatgggaccgtcagctatcgacaccgaaatccgctctctgagtcct
catttgggaggatccacccacctactgtcacagttcttaacttcaatcaccctcgtcctg
gagtctaagcgtaactatgaaatagttcaagcttatctagggctctttttaaaggttcat
gggagttccttaagcgaggaacatgaattgtgtgctcgagcagagaaagtgtcgggtgta
ttgaaagatagctggtcaacgcttcagacgaattttgaaagcaccctttgtttggtgtcc
ttctttatgaacgctgttatctaa
DBGET
integrated database retrieval system