KEGG   Daphnia pulex (common water flea): DAPPUDRAFT_303234
Entry
DAPPUDRAFT_303234 CDS       T04347                                 
Name
(GenBank) hypothetical protein
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
dpx  Daphnia pulex (common water flea)
Pathway
dpx03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:dpx00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    DAPPUDRAFT_303234
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:dpx03009]
    DAPPUDRAFT_303234
Ribosome biogenesis [BR:dpx03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    DAPPUDRAFT_303234
SSDB
Motif
Pfam: Utp21 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st WD40 Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WDR55 EIF3I Beta-prop_EML ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_VPS8 Beta-prop_WDR35_2nd Beta-prop_RIG_2nd Beta-prop_HPS5
Other DBs
NCBI-ProteinID: EFX89548
JGI: Dappu1_303234
UniProt: E9FU09
LinkDB
Position
Unknown
AA seq 907 aa
MTDKAENHESFLDASRIFTGHRALGLVSNHIPLVTRYIPKRKETLIVTVIGNSFHTYGST
KLNLLSIGRAHEDDITCLAADTYRVFTASGHIIKVWRRSTELSKEFKGHEKPIHLMLPFG
QHLLAVDETNNLKVWDINAAEVSFELDFNPDTFSISAMVHPVTYLNKILFGSMQGTMQLW
NLKTGKMVFAFNGWKSQITILEQAPAVDVVAVGLASGEMCLHNLKFDETLIKFKQDWGPI
TALTFRTDGAPIMITGSSQGHLAIWDLEQQTLIQQHRHAHRGAVTGLKALASEPIIITSS
PDNSLKMWIFDQSDGGVRLLRDRGGHKAPPIRLRFHDLLGEWILSTGLDSSLRTFSTVAD
LLHRNLGTAHYNQKKARRVGLEKAGPKMPPITNFASDSVRDKEWDSIAAVHRHQSEVTTW
SFHRQTMGEHKLTHKRFAEDMALKKTSATCVTITACGNFAIVGYDSGHIDRYNMQSGIHR
ATYLRLDTEESSKLPFTRNAVRGVVSDGLNQVVLGAFTNGQLTTWNFKSVEIVRETNLNA
APSFIQINRHSGLLAIAMEDFTIIIVEVETGNIVRRLTGHDGRLTDLAFSPDARWLVSSA
QDCSIRTWDLPTGTCIDYFLLPKSCVSLTFSASGSFLATAHVDDLGIYLWNNQSLYTQVS
LRALEKDFEPKTAPLPGSAVKSGESEIEDSEQIEEEEEFSSPEQIADALVTLSLLPDSRW
KNLLSLDAIKRRNRPKEAPKLQKLAPFFLTNTNSLPSADGQKDSGSRILNTFSSPFAMPL
TPWAEKLNSAEKPEEYWAVIEELKGMGPSAIDTEIRSLSPHLGGSTHLLSQFLTSITLVL
ESKRNYEIVQAYLGLFLKVHGSSLSEEHELCARAEKVSGVLKDSWSTLQTNFESTLCLVS
FFMNAVI
NT seq 2724 nt   +upstreamnt  +downstreamnt
atgacggataaagcagaaaatcacgaaagttttttagatgcgagtcgaatatttactgga
catcgtgcgctgggacttgtcagtaaccacattccgttggttacaagatatattccaaag
aggaaggaaacactcattgttacagtcattggtaactctttccacacttacggatccacc
aaactgaatctcctaagtattggaagagcacatgaagatgacatcacatgtcttgcagct
gatacctaccgggttttcacagccagtggtcacattatcaaagtatggagaagaagtact
gaactttccaaagagtttaagggacatgaaaaacccattcatttgatgctgccatttggt
cagcatcttcttgctgttgatgagacaaacaaccttaaagtttgggatatcaatgcagct
gaagtcagctttgagctagacttcaatcctgatactttttccatttctgctatggtgcat
cctgtgacatacctaaacaaaattttgtttggaagtatgcaaggtactatgcaattatgg
aatctaaagactggcaagatggtttttgcattcaatgggtggaagagtcaaatcactatc
ctggaacaagcccctgctgttgatgttgtggctgtaggactggcttcaggagaaatgtgt
ttgcacaacttgaaatttgacgagactttgataaagttcaaacaagactggggaccaatc
acagctctaacattcagaactgatggtgctcctattatgatcactggaagtagccaaggt
catctggctatttgggatctagaacaacagaccctcattcaacagcatcgtcatgctcat
cggggagcagtcactggtttgaaagctttagcctcagaaccaatcatcattacgtcttct
cctgataattcgttgaagatgtggatttttgatcaatcagacggaggagtacgattgctc
cgtgatcgtggaggccataaagctccaccaatccggttgcgctttcatgatctccttggc
gaatggattctgtcaactggattagattcttcgctgcgaacgttctcaaccgttgctgat
cttcttcaccgaaatttaggcactgcgcactacaatcaaaagaaagccagacgggtcgga
ttagaaaaggccggcccaaaaatgcctccaattaccaactttgcatctgattcggttcga
gacaaggaatgggattctattgcagctgttcatcgtcatcagtcagaggtgactacatgg
tcattccatcgacaaacaatgggcgaacataagctgacacacaaacgctttgcagaggac
atggctttaaaaaagacatctgcgacttgtgttaccattacggcttgcggaaattttgcc
attgttggttatgactcaggccatattgatcgttacaatatgcaatcaggaattcatcgt
gccacatatcttcgcttagatactgaagagtcgtctaaattgccgtttactcgtaacgcc
gttcgaggggttgtctcggatggtttaaatcaggtagttttgggagccttcacaaatggc
cagttaactacatggaacttcaagtctgtagaaattgtaagggaaacaaatctaaatgct
gcacctagctttattcaaattaatcgacacagtgggcttttggctatcgcgatggaagac
tttacgatcatcattgtggaagtcgagaccggaaatattgttcgacgacttactggacat
gatgggcgattgacggacttggcctttagtccggatgctaggtggttggtatcatccgca
caggattgcagtattcgaacgtgggacttgcctactggaacgtgcatagattattttctt
ctgcccaaatcttgtgtttctctgactttcagcgcgagtggcagttttttagccacagcg
catgttgatgatcttggcatttatctgtggaacaaccagtcactctacacgcaagtttca
ttgcgggcactggaaaaagattttgaaccgaaaacggctcccctaccaggatccgctgtc
aagagcggtgaatctgaaattgaagacagcgagcaaattgaggaggaggaagagttctcc
tcgccggaacaaattgctgatgctcttgttactctttctctacttcctgattccagatgg
aagaaccttcttagccttgacgctatcaaaagacgaaacaggcctaaagaagcaccgaag
ttgcagaaacttgccccttttttcttaaccaacacaaacagccttccatccgcagatggt
cagaaagactcgggttcgcgtattttgaacacattcagctcaccttttgcgatgccgtta
accccgtgggctgagaaattaaacagtgccgagaaaccagaagaatactgggctgttata
gaagaactcaaaggaatgggaccgtcagctatcgacaccgaaatccgctctctgagtcct
catttgggaggatccacccacctactgtcacagttcttaacttcaatcaccctcgtcctg
gagtctaagcgtaactatgaaatagttcaagcttatctagggctctttttaaaggttcat
gggagttccttaagcgaggaacatgaattgtgtgctcgagcagagaaagtgtcgggtgta
ttgaaagatagctggtcaacgcttcagacgaattttgaaagcaccctttgtttggtgtcc
ttctttatgaacgctgttatctaa

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