Daphnia pulex (common water flea): DAPPUDRAFT_303339
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Entry
DAPPUDRAFT_303339 CDS
T04347
Name
(GenBank) mismatch repair ATPase Msh4
KO
K08740
DNA mismatch repair protein MSH4
Organism
dpx
Daphnia pulex (common water flea)
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dpx03036
]
DAPPUDRAFT_303339
Chromosome and associated proteins [BR:
dpx03036
]
Eukaryotic type
Meiosis-specific proteins
Others
DAPPUDRAFT_303339
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
HRI2_3H
MutS_II
AAA_29
AAA_19
AAA_27
Motif
Other DBs
NCBI-ProteinID:
EFX81651
JGI:
Dappu1_303339
UniProt:
E9GFK0
LinkDB
All DBs
Position
Unknown
AA seq
750 aa
AA seq
DB search
MTDSHGFVKTLTKMNLFRPTEVLMPDTALAPGSPSPLAQAISRFDCDIVMTAANRGAFND
AEGIERVQKLAVVDHLNILVLIEQKYYALAAVAALMAHLENNLNIMFAPGTLRIYYSGTD
KTAIIDSETANRLEVVNSLNPTGGPSLLSALNSCQTAAGKRLLRSNLLEPMTDVEAIRLR
LDAVEELASRPTDLHQPIKEILSRFVDVERAVNQCVVMPKNPSPSFVEQRINAVVALKHI
LSLVSPLGSALAKANSPLIVALAKELASIDDEALLSCIQDVLDERVKPVKGKIGMQRQRF
RSVKTGVDLMLDVCRRTHSDLETEMEGKCNVVNGAVPSAIPFPSILQSLIFFTTFFRPYF
SLLMVYFPILQMKKQGNIIAFTTQHLLVSNERIKSVEKDIEKITNVVIEDLLSKTRSDIG
SLYKLREIVCQLDVIVSFAQVSSAGGFCRPTFSNELVIRSGRHPILDHFSPSALVSNDTE
MTVESNFHVITGANMSGKSTYIRQVMLLQIMAQIGCFVPASSASFRIADQMFSRLGTHDR
LENNASSFSLEMTEMNYIVRNAGPGSLVIIDELCNETAADQGSAICWSICEALMMTEAWV
MIATHTPLITKLQDLYFNVTNYHMEVLEEEREDGRSKLNYTHVIRPGVTQLENYGMKLAC
MVAFPPEILTRAKELIPILSANLKPLPKTTFDFKMNKLNYALHKKLVDIGRRMDSLPDQT
FLMEMQRVRQAYTDELNKIMEEHEAETSAN
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgaccgattcccacggcttcgtcaaaacgctgactaaaatgaatctattccgcccgacg
gaggtgttgatgccggatacggccctggctcccggttctccgtcgccgttggctcaagcc
atcagccgatttgattgcgatatcgtcatgactgccgctaatcgcggagctttcaacgac
gccgaaggcatcgagcgcgtccagaaattggctgtcgtcgatcacttgaacattctcgtt
ttgattgagcaaaagtattacgccctggcagctgtggctgctctaatggcacacctggaa
aacaatttgaatatcatgttcgctcctgggacgctgaggatctactacagcgggacggat
aagacggccatcatcgattcggaaacggccaaccgtctggaagtggtgaacagtttgaat
ccaacgggcgggccgtctctactttcggcgttgaattcgtgccaaacggcggctggtaag
cggctactccgctcgaatttactggaacccatgacggatgtggaggccatccgtctacgt
ctggatgccgtcgaggagcttgcgtcacgtcctaccgacctccatcaacccatcaaggag
attctgtcccgtttcgtcgatgttgaacgagccgtcaaccagtgcgtcgtcatgcccaag
aatcctagtccgtcgttcgtcgagcaaaggatcaacgccgtcgtggccctcaagcacatc
ctctctctagtgtcgccacttggatccgccctggccaaagccaacagcccattgattgtc
gccttggccaaagagctggccagcattgatgatgaggcgctgctgtcgtgcattcaggac
gtgttggacgagcgagtgaaacctgtcaaaggcaaaataggcatgcaacgccagcgattc
cgcagcgtcaaaacgggcgtcgatctcatgctggacgtttgtcggcggactcacagcgat
ctcgaaacagagatggaaggcaagtgcaatgtcgtaaacggagctgttccctcggcgatt
ccatttccatcaattctccagagtcttatcttttttaccaccttttttcgtccatatttt
tccctcttgatggtttatttccctattttacagatgaagaaacaaggcaatatcatcgcc
ttcacgacgcagcatctcctggtgtctaacgaacgcatcaaatctgtcgagaaggacatt
gagaagatcaccaacgtggtcatcgaggatctcctgtccaagacgcggagcgacattgga
tccctgtacaaactgcgtgaaatcgtttgccaactggacgtgattgtttcgttcgctcaa
gtcagttccgccggcggattctgtcgtcccacattcagcaacgagctcgtcatccgttcc
ggtcgccatccgatcctggatcacttttctcctagcgccctcgtctccaacgacacggaa
atgacggtggaatccaatttccatgtcatcaccggagctaatatgagtggcaaaagcacc
tacatccgccaagtgatgctactgcaaataatggcccagattggttgttttgttccggct
agcagcgcttcattccggattgctgatcaaatgttctcccggctcggcactcacgaccgt
ttggaaaacaacgcctcctccttctctctcgagatgacggagatgaattatattgtccgc
aacgccgggcccggatctttggtcatcatcgacgagttgtgcaacgagacggccgccgat
caaggcagtgccatctgttggagcatttgcgaggccctgatgatgaccgaagcttgggtc
atgattgccactcacacgccactcatcaccaaattgcaggatctctactttaacgttaca
aattaccacatggaagtcctagaagaagagcgcgaagatgggcgatccaagctgaattac
actcacgtcatccgacctggcgtcacgcaattggagaattacggcatgaaattggcttgc
atggtcgcgttcccgcccgaaatcttgaccagagccaaggaactgatcccgattctttct
gccaatttgaagccgctgccgaagacgacctttgacttcaagatgaacaagctcaactat
gccctgcacaagaagctggtggatatcgggcgccggatggattctctgcccgaccagacc
tttctaatggagatgcagcgtgttcgccaggcttacacggacgagctcaacaagatcatg
gaagagcacgaagccgagaccagcgcaaactga
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