Daphnia pulex (common water flea): DAPPUDRAFT_303758
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Entry
DAPPUDRAFT_303758 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03040
Spliceosome
dpx04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DAPPUDRAFT_303758
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
DAPPUDRAFT_303758
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpx03041
]
DAPPUDRAFT_303758
04121 Ubiquitin system [BR:
dpx04121
]
DAPPUDRAFT_303758
03400 DNA repair and recombination proteins [BR:
dpx03400
]
DAPPUDRAFT_303758
Enzymes [BR:
dpx01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
DAPPUDRAFT_303758
Spliceosome [BR:
dpx03041
]
Complex B
Other components
Prp19 complex
DAPPUDRAFT_303758
Complex C
Prp19-CDC5 complex
DAPPUDRAFT_303758
Ubiquitin system [BR:
dpx04121
]
Ubiquitin ligases (E3)
U-box type E3
DAPPUDRAFT_303758
DNA repair and recombination proteins [BR:
dpx03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
DAPPUDRAFT_303758
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Prp19
ANAPC4_WD40
NBCH_WD40
U-box
Cytochrom_D1
PAS_11
PROPPIN
zf-Nse
Motif
Other DBs
NCBI-ProteinID:
EFX80977
JGI:
Dappu1_303758
UniProt:
E9GHW8
LinkDB
All DBs
Position
Unknown
AA seq
503 aa
AA seq
DB search
MALCCSLSNEVPEHPVVSPVSGSVFERRLIEKYIADNGVDPINGKEITVDQLIEIKTPPI
VKPKVPSATSIPAVLKSLQDEWDAVMLNSFTLRQQLQTARQELSHALYQHDAACRVIARL
HKEVSTAREALATLKPQTGYAAVSTPSVAASAEAGGVAAQPIEAAGLTPEIISQLQDKAT
VLTQERKRRGKTMPEGLATAEALKGYKTLASHPALHSASMPGILTMDVHAADTSHILTGG
NDRCATVFNKDTEQVVAVLKGHTKKVTKVLYHPEEEVAITASPDATIRVWNITSSSQSAI
IRAHDGPVTGLSLHATGEYVLSTSLDQHWAFSDIRVGRLLTKVADTDGNPLTTAQFHPDG
LIFGTGTQDSQIKIWDLKEQSNVANFPGHSGPIAALSFSENGYYLATAAEDSCVKLWDLR
KLKNFKTIQLDEGYEVKDLCFDQSGTYLAVAGTDVRVYLCKQWETLKTFNDHTALAMGVR
FGNHAQSIASVSMDRTLKIYGIE
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggcactctgttgttctctatcgaacgaagttcccgaacatcctgtggtctcaccggtg
tcaggatctgtgtttgaacgtcggctgattgaaaagtacattgctgataacggggtagat
cccatcaatgggaaagaaataactgtagatcaacttattgaaatcaaaacccctccaata
gtgaagcccaaagtaccatctgcaacaagcattcccgctgtgcttaaatctttacaagat
gaatgggatgctgtcatgttaaattcctttactttgaggcaacaattacaaactgctcga
caagaattgagtcatgctctctaccaacatgatgctgcttgtcgtgttattgcacgcctc
cacaaggaagtatctacagcacgggaagcacttgcaactcttaagccccagactggctat
gctgctgtatctacaccatctgttgctgcctcagctgaagctggtggtgtggcagcacag
ccgatcgaggcagctggattaactccggaaatcatatcacaattacaagataaagccact
gttcttactcaagagcgaaaacgtagaggcaagaccatgcccgaaggcttagctacagca
gaagctttgaagggatataaaactttggcatctcatccggctttgcacagtgcaagtatg
cccggaattttgaccatggacgttcatgccgccgatacatctcatattttgactggaggt
aacgatcgatgcgctacagtttttaacaaggacactgagcaggttgttgctgttctcaag
ggacatacaaaaaaagttaccaaggtgctttatcatccagaagaggaagtcgcgataaca
gcatctcctgatgcgacgattcgtgtttggaatataaccagctcctcacaatctgccatc
atccgtgctcatgatggccctgttacaggcttgtcgctccacgcaaccggagaatatgtt
ttgtcgacgtcactggatcaacactgggcattttcagatattcgcgttgggcggttgttg
actaaggttgccgacacagacggaaatccgctgacgacagcccagttccatccggatggt
ctcattttcggcactggaacacaagattcacagatcaaaatttgggatttaaaagaacaa
tctaacgtggccaactttccaggtcattccggtcctattgcggctttgtcattttcagag
aatggttactatttggctacagcggcagaagactcttgcgtcaaattgtgggatttacgt
aaattgaagaattttaaaacaatccagctcgacgaaggatatgaagttaaggacttgtgc
ttcgatcaaagcggcacctaccttgctgtggctggtaccgacgtgcgtgtttatctctgc
aagcaatgggaaactcttaagacttttaacgaccatacggcattggctatgggagtccgt
ttcggcaaccatgcgcagtcgatagcgtctgttagtatggatcgtacgctgaaaatttat
ggcatcgagtga
DBGET
integrated database retrieval system
