Daphnia pulex (common water flea): DAPPUDRAFT_304010
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Entry
DAPPUDRAFT_304010 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K18735
protein SMG9
Organism
dpx
Daphnia pulex (common water flea)
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpx03019
]
DAPPUDRAFT_304010
Messenger RNA biogenesis [BR:
dpx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
DAPPUDRAFT_304010
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
Motif
Other DBs
NCBI-ProteinID:
EFX80554
JGI:
Dappu1_304010
UniProt:
E9GJ34
LinkDB
All DBs
Position
Unknown
AA seq
416 aa
AA seq
DB search
MSQPETNSSSRGKSRREGGKQSLYKPSRDERDRSGYGSNYRGKNRQSANVDIAPPTILLK
TRANETRSLSPVHQVKSSVSGDNLSRNAFKIPARKDDSDNTATVIMTAPVKLLSEDLVFQ
DSLPEFLTDNPDFLVVGCVGLQWSGKSSVLSHLAASNCRNIVKQTMFSIATSHLQMKGLT
GTIGLDAYVTEDRVIWLDCQPLLSAAIAEREIVANYSKDTYKENLPKLESSCVGTSMEVQ
SLQLLSFLYCICHILIVVQDSLGDPNLIRLLQTAEMLKPNLASEDSVVDHMPHLVTIYNR
AQPSDLVPEMLKQTHKFYKMAFKKSRLQISSEQFSDSLKTDDGANFVSLLDWTSANDQWT
SYEETIPQLKAKLLALPRHSFGPAGITEKSWFSFAIKAWEAVRKSTLMMEYARLLQ
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagcctgagacgaattcatcttctcgagggaaaagtcgaagagaaggaggcaaa
cagtctttgtacaaaccatcacgagatgaaagagatcgttcaggatatggctcaaattat
cgtggtaaaaataggcaatctgctaacgtcgatattgctcctcctacgatccttttgaaa
acaagagccaacgaaactagaagcttgtcacctgtgcatcaagtaaaatcatcggttagc
ggtgacaatttgagcagaaacgcattcaagattcctgcgagaaaagatgattctgacaat
acagccacagttatcatgacggcacctgtcaagcttctcagtgaagacttggtctttcaa
gattctctccctgaattccttacagataatcccgattttctggtggttggctgtgttggt
ctacagtggtcaggaaaatcatctgttctctcacacctagcagcatcaaattgtaggaac
atcgtcaaacaaaccatgttctccattgctacatcacatctccaaatgaaaggcttgaca
gggacaataggcttggatgcctatgtgactgaagatcgcgtaatctggttagactgccaa
ccattactctctgctgcaattgcagaaagagaaattgttgcaaactactccaaggatacc
tataaggaaaatctcccaaagctggaatcatcttgtgtgggaacatcaatggaggttcag
tccctacaattgttgtcatttctttactgcatttgccacatccttatagtggtgcaagat
tctcttggagatcctaacctcatcaggttacttcaaaccgctgaaatgctgaagcctaat
ttagctagcgaagattctgttgtcgatcatatgcctcacctggtgacgatttacaatcga
gcccaaccgagtgatcttgtcccagagatgctgaaacagactcacaaattttataaaatg
gctttcaagaaatcgaggcttcagatctctagcgaacaattcagtgactcactcaaaacg
gatgatggcgccaattttgtctcgttactcgactggacttcggcaaacgatcaatggacg
agctacgaggaaactattccacaattgaaagcgaagctgctagcccttcctagacattca
tttggacctgccggaataacggaaaaatcatggttttcctttgccattaaagcctgggaa
gcagtcaggaaatcaacactaatgatggaatacgctcgtttgttacagtga
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