KEGG   Daphnia pulex (common water flea): DAPPUDRAFT_304030
Entry
DAPPUDRAFT_304030 CDS       T04347                                 
Name
(GenBank) hypothetical protein
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
dpx  Daphnia pulex (common water flea)
Brite
KEGG Orthology (KO) [BR:dpx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dpx03041]
    DAPPUDRAFT_304030
Spliceosome [BR:dpx03041]
 Complex B
  Other components
   Complex B specific factors
    DAPPUDRAFT_304030
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_THOC3 WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_ACSF4 WD40_Gbeta ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_Nup120_160 LisH_TPL WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_VPS8 Beta-prop_NUP159_NUP214 Ge1_WD40 Beta-prop_Aladin WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_NWD2_C Beta-prop_HPS5 Beta-prop_TEP1_C Beta-prop_WDR41 Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N Beta-prop_SCAP Beta-prop_WDR19_1st Beta-prop_SPT8 WD40_RFWD3 Beta-prop_BBS7 Beta-prop_IP5PC_F RMC1_N Beta-prop_EIPR1 Beta-prop_LRRK2 DUF7165 Beta-prop_WDR75_2nd PROPPIN WD40_like KNTC1_N VPS8_N zf_topless PQQ
Other DBs
NCBI-ProteinID: EFX80413
JGI: Dappu1_304030
UniProt: E9GJA5
LinkDB
Position
Unknown
AA seq 513 aa
MSIEIESADVIRLIQQFLKESNLMRTLQVLQDETGISLNTVDSVESFADDILSGHWDTVL
KATQSLKLPDKKLIDLYEQVVLELIELRELGAARSLLRQTDPMALMKQQEPDRYLNLENL
LARSYFDTREAYPEGSSKEKRRAAIAQALSGEVSVVPPSRLLALLGQSLKWQQHQGLLPP
GTSIDLFRGKAAIKEQEEEQPPTQLTKHIKFGQKSHVECAKFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMEDAILCLTFSRDSEMLASGSQDGKIKVWKIQTGQCLR
KFEKAHSKGVTSMQFSKDNSQLLTGSFDMSVRVHGLKSGKTLKEFRGHTSFVNEAIFTAD
GHHVLSASCDGSVKVWSMKSGECVSTYKSLGGSSGGDLTIHTITLLPKNPEQFIVSNKSS
TVVIMNMQGQIVRSFTSGKRDGGDFVCCTLSPKGEWIYCIGEDMVLYCFSIASGKLEKTL
TVHEKEVIGMSHHPHQNLLCTYSEDGFLRMWRP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtctattgaaattgaatcagccgacgttattcgtcttatccagcagttcttgaaagag
tctaacttgatgaggaccctccaagtgctccaggatgaaacaggcatttctctcaacact
gttgattcagttgaatcatttgcagatgacattctcagtggccattgggatacagtttta
aaagctacacaatctcttaaacttccagacaaaaaattaattgacctttatgaacaggtc
gttttagaattgatagagctccgtgagttgggagcagccagatcactgctgcgtcagaca
gatcccatggcccttatgaaacagcaagaacctgatcgatatttaaatctagaaaacctg
ctggctaggtcttattttgacaccagggaagcatatcccgaaggaagcagtaaagaaaaa
cggagagcagccattgctcaagctttgagtggagaagtgtccgtggtaccaccgtctcgt
ctactcgctctactcgggcaatctttgaaatggcaacagcatcaaggacttttgcctccc
ggtaccagtatcgatcttttcagaggtaaagctgccatcaaagaacaagaagaggaacag
ccccctactcagttgactaaacacatcaaattcggacaaaagtctcacgtcgaatgcgca
aaattctcacctgacggacaatatcttgtcaccggctctgttgacggctttattgaagtt
tggaattttaccacaggaaagattcgtaaagatctcaaataccaagctcaggacaatttc
atgatgatggaagatgctattctctgcctaaccttcagtcgtgactctgaaatgcttgct
agtggctctcaagatggcaaaatcaaagtttggaaaattcaaactggccagtgcctacgc
aaatttgagaaagcccatagcaaaggtgtgaccagtatgcagttctccaaagataacagt
cagctactgacaggatcgttcgacatgtccgtcagagtccacggtttaaaatcaggcaag
actctgaaagagttccgtggccacacttccttcgtcaacgaagccattttcacagccgat
ggtcatcacgtgttgagtgcttcttgtgacggcagtgtcaaagtctggagtatgaagtcg
ggcgagtgcgtctccacctacaaatcgctgggtggttcgtcaggcggtgacttgacgatt
cacaccatcaccctcctacccaagaacccagagcagtttatcgtcagcaataagagcagt
accgtagttattatgaatatgcagggacagattgtcagatcattcaccagcggtaagcgt
gatggtggtgactttgtttgctgtaccctatcacctaaaggtgaatggatttattgcatc
ggtgaagacatggtgctctattgtttctccatcgcatcaggcaaactcgaaaaaacttta
acggtccacgagaaagaagtcataggcatgagtcaccacccgcaccaaaatctcctgtgt
acctacagtgaagacggatttctgagaatgtggcgaccttaa

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