Daphnia pulex (common water flea): DAPPUDRAFT_304334 Help Entry DAPPUDRAFT_304334 CDS       T04347                                  Name (GenBank) hypothetical protein   KO K12591   exosome complex exonuclease RRP6 [EC:3.1.13.-] Organism dpx  Daphnia pulex (common water flea) Pathway dpx03018   RNA degradation Brite KEGG Orthology (KO) [BR:dpx00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     DAPPUDRAFT_304334  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:dpx03019]     DAPPUDRAFT_304334 Messenger RNA biogenesis [BR:dpx03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Exosome cofactors      DAPPUDRAFT_304334 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_pol_A_exo1 PMC2NT HRDC DUF1825 Motif Other DBs NCBI-ProteinID:  EFX79910 JGI:  Dappu1_304334 UniProt:  E9GKT7 LinkDB All DBs Position Unknown AA seq 834 aa AA seqDB search MSEKESEKNGNAQEVQQKLFQSAMKVTKYSNELPSSGSDWDYYQSYPAYASAMKEFGGRI TNVMTKIYGHYGLTGKVGKLDLEEQMELVSDNNDILMERINLSLDEAAGLKKQAETVVVE MMAKTTNINGSWNRHSVSSPATSYKLLSAKNILRPQLKFKEKIKNSPGPFIPKIKDKPHS SKPLAILLELNDLGDEEFSHPYEFELERFTPDPKFFTVLDEVPPFPSVQEIPLVMIDTEQ GLKSLLKDLLEETVIAVDLEAHSYRSFQGLTCLMQISTSSSDYIIDTLELWDQLQPLNEV FCNPKIVKIFHGADMDIQWLQRDFGIYVVNLFDTYHAAKLLGFAQLSLSFLLRHYCQVIA DKQYQLADWRIRPLPEQMVNYAREDTHYLGYIYEKMKKDLKMKGTGDNLLTAVWQNSRLV CLKRYRIPPITAESHLELYRLSKKIFNERQLFALKELFAWRDRIAREEDESTGFVLPKHM LLQIADVLPKEMQGILACCSPIPSLVRQHLLHLHGIILKAREMPLATLQHHGQPLAIPKM MPTPLDQDTEDPLYCMHDLTHSQDIRDDLPTLLNPQTIESMASKSEEFGVRVTVKEFPQA LIFAESAQPGIVTNVSTNFVSPYTRYIRVRALKSAEEAAEAQRVEKLRQHFMEEVAHSTP DAQREAEAMEEEAEAVAVVPAKKKKLPLKAQGLNKKKKKVGSTKRVTATPETSVIPSNSS SPPKKSADAVVPSASKSPNPTTSKSPNPGMKKKSLKQPASKEAGNATAANFEPFDYSQVD YHAFKRSALREDGDGRGRGRGRGRGGKNRRGGPGHNNNRIHRKGGQKSLTYSSK NT seq 2505 nt NT seq  +upstreamnt  +downstreamnt atgagtgaaaaagaaagtgagaagaatggaaatgcccaagaggttcaacagaaattattt caaagtgcaatgaaggtcacaaagtactctaatgaattaccaagtagtggttcagactgg gattactaccaaagttatccagcgtatgccagcgcaatgaaagaatttggtggtcgcatt actaacgtgatgaccaaaatttacggacactatggactcacaggaaaggtgggcaaattg gatttggaagaacagatggagctggtgtcagacaacaatgacatcttgatggagcgaata aatctttctctagatgaagctgctgggttaaaaaaacaagcagaaactgtagttgttgag atgatggcaaaaactactaatattaatggcagttggaatcggcattctgtgagttcacca gcgacatcttacaaacttctctcggctaaaaacattctgagaccacagttgaaatttaaa gagaaaatcaagaattcacctggaccgtttatccccaaaatcaaggataagcctcactcg tcgaaaccactggcgatactattagaattgaatgacttgggcgatgaagagtttagccat ccgtacgaatttgaattggaacgttttacaccggatccaaagttcttcaccgtacttgat gaagtgcctccattcccaagtgttcaagaaatccctttggtaatgatagatactgaacaa ggtttaaaaagtcttttgaaagatttgcttgaggaaactgtgattgctgtagatctggag gcccattcatatagatcctttcaaggcctaacatgcttaatgcaaatttcaacaagcagt tctgactacattatagacactttagagctatgggatcaactacagcctttgaatgaagtt ttctgcaatccaaagattgtgaagatttttcatggagctgatatggatattcaatggctt cagcgcgatttcggtatctacgtcgttaatcttttcgacacttaccacgctgccaaacta ttgggttttgcacagctgtccttgtccttcctccttcgtcattattgccaagttattgct gacaaacaataccagcttgccgattggcgaattcgtcccttgcctgagcaaatggtcaat tatgctcgagaagatacccactatctaggatacatttacgaaaagatgaaaaaggatttg aagatgaagggaacaggagataatttgctgacagcagtttggcaaaacagccgactggtt tgtctcaaacgttacagaattccccctatcactgccgaaagccatttggaattgtatagg ctcagcaagaagattttcaacgaacgtcagctgtttgcattaaaagaactgtttgcttgg cgcgatcgaatagctcgagaagaagacgagagcactggttttgttctacccaaacacatg ttgttgcaaatcgccgatgttctacctaaggagatgcaaggtatacttgcctgttgctcg cccatcccttcgctcgttcgtcagcatttacttcatctccatggaatcatattaaaagca agagaaatgcctctcgccactctgcaacatcacggccagccattagccatcccgaaaatg atgccgactccattggatcaagacaccgaagaccccctttattgtatgcacgacttgaca cattctcaggacatccgagacgacctacccactctgctgaatccgcaaacgatcgaatca atggcgtcaaaatccgaggagtttggagtccgcgtcactgtgaaagagttcccacaagct ctaatcttcgctgaatcggcccagcctggcatcgtgacaaatgtatcaactaattttgtt tctccatacacaagatatattcgtgtcagagctctaaagtcggccgaagaagccgctgaa gcacaacgtgtcgaaaagttgcgtcaacatttcatggaagaagtggcgcattcaacaccc gatgcccagcgtgaagcggaagcgatggaagaagaggcggaagcagtagcagtagttcct gcgaaaaaaaagaagttgccgttgaaagcgcagggacttaacaagaagaagaagaaagta ggaagtactaaacgagtaacggctactcctgaaacatctgtaattccatcaaactccagc tccccaccgaaaaagtcggcggatgcagtagtgccgtcagcatccaagagcccaaatcca acaacatccaagagcccaaatccaggaatgaagaaaaaatcattaaaacaaccagcgagc aaagaagcaggaaatgctaccgcggctaattttgaaccatttgattactcccaggttgat tatcacgcttttaaaaggagcgcactgcgtgaagatggtgatggacgcggtcggggtcga ggaagaggccgtggtggcaaaaaccgaagaggtggtcccggacataacaataacagaatt cacagaaagggtggccaaaagagtcttacgtattcatcaaaataa

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