Daphnia pulex (common water flea): DAPPUDRAFT_304474
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Entry
DAPPUDRAFT_304474 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DAPPUDRAFT_304474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpx03021
]
DAPPUDRAFT_304474
03036 Chromosome and associated proteins [BR:
dpx03036
]
DAPPUDRAFT_304474
Transcription machinery [BR:
dpx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
DAPPUDRAFT_304474
Coactivators
SAGA/TFTC/STAGA complex
DAPPUDRAFT_304474
Chromosome and associated proteins [BR:
dpx03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
DAPPUDRAFT_304474
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
TMA7
Motif
Other DBs
NCBI-ProteinID:
EFX79515
JGI:
Dappu1_304474
UniProt:
E9GLH0
LinkDB
All DBs
Position
Unknown
AA seq
541 aa
AA seq
DB search
MTPDTAKVKCKNFLSTLLRLASEQPESVATNVQMLIQGLVDAKVEPEEFTTKLQRELNSS
PQPCLIPFLKKSLPYLRQSLALRELHIDGIRPPALTTVNAPQPMVIQQQHPQQHSVVNRV
NAGPTQIQTVRPMGGQVRLQTPTMVGASAGTLPAPRPPRPAANKATPKAKAAQQAPKVTA
TTTAVAASTTMTAVSTIKTEPSITSESPAPIAFTIHLPQVGGVTSAPTAITPGPTPLVTV
ASTSAAPTSSTATKPTTSAATVSVGPGGIKGPLPVPTGPKDASKEKKAFTFGSSLAGLAD
NDINDVAAMGGVNLAEESQRILGSTDMIGTQIRSCKDENFLFTGPLQRRIQQIASRNGLG
DPSPEVVSLISHATQERLKTLLEKLAVTAEHRMEVVKTDARYEVQQDVKGQLKFLEELDK
LERRRHSEIQREMLLKAAKSRSKAEDPEQAKLKAKAKEMQRAEMEELRQREANMTALQAI
GIRKKPKLDLAGTTGSYNQVKSKFVPLRPRVKRVNLRDLLFLLKEEKGTIRSPLLYKAYL
K
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgaccccagatacggccaaagtcaagtgcaaaaactttttgtccactttgctacgtcta
gcgagtgaacagccggaatctgtggccactaacgttcaaatgctcattcagggtttagtt
gatgcgaaggttgaaccagaggagtttacaacgaagctccaaagagaactcaactcctct
cctcagccttgcctcattccatttctcaagaaaagcttgccctacttgagacaatcccta
gctttacgagagttgcatattgatggaatccgaccgccagccttaactacggtcaacgct
ccgcagcccatggtaatacaacaacaacatcctcaacaacacagtgttgtcaaccgagtg
aacgccgggccaacgcagatacaaacagtacggccaatgggtgggcaagttcgactccaa
acacctacaatggttggcgcctctgctggcactctacccgcaccacggccaccgagacca
gccgccaataaagccactccaaaggccaaagcagcccagcaggcccctaaagtgactgcc
acgacaacggcggtcgctgcctcgaccacaatgacggctgtttctactatcaagacggag
ccttccattacttccgagtccccagcgccaatcgcttttaccatccacctgccacaagtc
ggaggagtaacatcagcgccgactgccataacgccgggtcctacacctttggtcacggta
gcatcgacgtctgcggctccgacgtctagtacggcaacaaagccaacgacttcggcggca
acagtttccgttggtccgggtggtatcaaaggtcctctacctgtaccaactgggcccaaa
gacgcttcgaaggagaaaaaagcttttacgtttggttcgtctctagctggtctagcggac
aacgacatcaacgatgtagcggctatgggtggagttaacttggcagaagaatcgcagcgt
attcttggctccaccgatatgattggtactcaaattcgatcctgcaaagacgaaaatttc
cttttcaccggtcccttgcagaggagaatccaacaaattgcctccaggaacggtctggga
gatcctagtccggaagtagtttcgcttatatcacatgccactcaagaacgattgaaaaca
ttgttggaaaagcttgccgtcactgccgagcatcgaatggaagttgtcaaaacagacgct
cgttatgaagtccaacaggatgtcaagggtcagctaaaattcctcgaggaactggacaag
ttggagcgacgaaggcatagcgagattcaacgcgaaatgcttttgaaagcagcaaaatca
cgttcgaaagctgaagatcctgaacaggcaaagttgaaagcaaaagcaaaggagatgcaa
cgagcggaaatggaggaactgagacaacgcgaggccaacatgacagccttgcaagctatt
ggtataaggaaaaagcccaaactcgacctggctggtactaccggctcttacaaccaggta
aaatcaaaatttgtgcctttacgaccgcgtgtcaagcgcgtaaatcttcgggatttactg
ttcctgctaaaagaagagaaaggaactataagatcccctctgttgtataaagcttatctc
aagtag
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