Daphnia pulex (common water flea): DAPPUDRAFT_305037
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Entry
DAPPUDRAFT_305037 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DAPPUDRAFT_305037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpx03021
]
DAPPUDRAFT_305037
Enzymes [BR:
dpx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DAPPUDRAFT_305037
Transcription machinery [BR:
dpx03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
DAPPUDRAFT_305037
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-ProteinID:
EFX79076
JGI:
Dappu1_305037
UniProt:
E9GN85
LinkDB
All DBs
Position
Unknown
AA seq
1134 aa
AA seq
DB search
MGEASRDVCADLEKLLEPIKAVEEKWKLVPAFLKTKGLVKQHIDSYNYFINVDIKKIVKA
NEKVVSHSDQTFYIKYLDIHVGKPDSIEDMNHSRLTTPHECRLRDMTYSAPVTVDIEYTR
GQQRIVRNGIPIGRMPIMLRSSNCTLAGISPAEMAKKNECPYDCGGYFIVRGNEKVILIQ
EQMSKNRMIVEQDRKGNMSCQVTSSTHGTKTRTNVVVNKGKYYLKQNSFQDDIPVAIVFK
AMGIVSDQEIVQMIGTDDRVMTSFAPSLEECVRASIFTQQQALGHLGNKLRQKRFFGGPK
KTATEEARETLATTILAHVPVENFNFKAKAMYLALMIRRVIQAENDPTSVDDRDYYGNKR
LELAGSLLSLLFEDLFKRMNFELKQIADKNIPKIKAAQFDVIKHIRTDHITNGLENAIST
GNWTIKRFRMDRQGVTQMLCRLSYISGLGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCP
SDTPEGEGCGLVKNLALMTHITTEAEEEPISRIAQNMGVEDINLFSGEEISDPSIYTVFL
NGNILGLVKDYLRLIRYFKLARRHGFINAFVSIYPHFQTRSVYISSDGGRLCRPYIIVRK
GKAALTDKHMQELADSFRTFEDFIHDGLIEYLDVNEENDSNIAVYESDINEETTHLEIEP
FTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIACNQRNRIDTLLYNLVYPHKPMVK
TRTIELINFENLPAGQNAMVAVMSYSGFDIEDATVLNKASLDRGYGRCLVYKNAKCALKR
YNNQSSDRVNGPILDAASKKPIWKHDILDADGFAAVGQPVEPKQVLINKAMPTAPVVTVA
PGAPAAVPLPEYRDVPIAYKGAIPSYVEKVMFSSNAEEAHIIKIQLRQTRRPEIGDKFSS
RHGQKGVTALVAEQEDLPFTELGICPDVIMNPHGFPSRMTVGKLIELLAGKAGLLEGKFH
YGTAFGGSKVQDVSEELIKHGYNYQGKECMTSGTTGEQLSAYIYFGPVYYQKLKHMVMDK
MHARSRGPRAVLTRQPTEGRAREGGLRLGEMERDCLIAYGSSMLILERLMISSDAFDVDV
CNQCGLMGYFGWCHYCKSSASVSSIRIPYACKLLFQELQAMNIAPRLKLDKYFD
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagcgagcagggatgtgtgtgcggatttggaaaaacttttggaaccaataaag
gctgttgaggaaaaatggaagcttgttccagcatttctcaagaccaaaggtcttgtaaaa
cagcacattgattcctacaactattttattaatgtagatattaagaagatagtgaaagca
aatgaaaaagttgtaagtcattctgaccaaaccttctacatcaaatatttggatattcat
gtggggaagccagactcgattgaagatatgaaccattctcggctgaccacaccacatgag
tgcagattgagagatatgacatattcagcaccagttactgtggatattgaatataccaga
gggcaacaaaggattgttcgtaatggaattccaattgggagaatgcccattatgctcagg
agctcaaattgcacactagctggtatttcacccgcggagatggcgaaaaagaatgaatgc
ccatatgattgtggaggatattttattgttcgcggaaatgaaaaagtaattttaattcaa
gagcaaatgtcaaaaaatcgcatgatcgtcgagcaggataggaaaggaaatatgtcttgt
caagtcaccagcagtacacatggaacgaagacgcgtaccaacgtcgttgttaacaaaggg
aaatactatctgaaacaaaatagtttccaagatgatataccggttgctatagtgtttaaa
gccatggggattgtgtctgatcaagaaatagtccaaatgatcggtactgatgatcgtgtg
atgacgtcattcgccccttcactagaagagtgcgttcgagcttccatcttcactcaacag
caagctctaggacatctgggtaacaaattgcgccagaaacggttttttggaggtccgaag
aaaacagcaactgaagaagccagggagacccttgctacgactattttagcccatgttcca
gtggaaaactttaatttcaaagcaaaggctatgtatctcgcattaatgattcgtcgagtt
attcaagctgaaaatgacccaacttctgttgatgatcgtgattattacggtaacaagcgc
ttggagttagccggttcacttctctccctactgttcgaggatttgtttaagcgaatgaat
tttgaattgaaacaaattgcggacaaaaacattccgaagattaaagcagctcagtttgat
gtgatcaaacacatacggacagaccacataacgaatggattggaaaatgccatatccact
ggaaattggaccatcaaacgttttcgcatggatcggcaaggtgttactcaaatgctctgt
cgattgtcgtatatttccggacttgggatgatgacacgtgtaaattctcagttcgaaaag
acacgaaaggtgtcgggaccgcgttctttacaaccttctcaatggggtatgctttgcccg
tcagatactccagaaggggagggatgtgggctcgtgaaaaatctcgcacttatgacccat
atcacaactgaagccgaggaagaacccatcagccggatcgctcaaaatatgggtgtcgaa
gatattaaccttttcagtggcgaggaaattagtgacccaagcatctacacagttttcctt
aatggtaatattctcgggttggtcaaggactacctgcggttgatccggtattttaaactg
gctcgacgccatggcttcatcaatgcattcgtgtcgatctacccgcatttccaaacgcgt
tccgtttatataagttccgatggcggtcgtttgtgccgaccttatataatcgtccgaaaa
gggaaagcagccctaaccgataaacacatgcaagaattggcagatagctttcgaaccttt
gaagactttattcacgatggattgattgaatacttggacgtgaatgaggagaatgacagc
aacattgctgtatacgaatccgacatcaacgaagaaaccactcatcttgaaattgaaccg
tttaccttgctaggcgtatgcgccggattgatcccgtatccccatcacaaccaaagtccg
cgtaacacttatcaatgtgccatgggaaaacaagcaatgggaactattgcctgcaatcaa
cgaaatcgcattgatacgcttctctacaatttggtgtacccccacaagccaatggtcaaa
actcgaacgattgaactcattaactttgagaatctccctgctggacaaaacgctatggtt
gcagtgatgagctactcaggtttcgatattgaggatgctactgttttgaacaaagcatca
ttggatcgaggttatggacgctgtctggtttacaaaaatgctaaatgcgctttgaagcgg
tacaacaatcagagctctgatcgtgtaaatggtccaatacttgatgcagcatctaaaaag
cccatatggaagcacgacattctagatgcggatggtttcgcagcagtcggtcaacctgtt
gaacctaagcaggttttgatcaacaaagctatgcctacagctcccgtggtcactgtcgct
cctggagcgcctgcagctgttcctctgccggaatatcgcgatgtccctatcgcttataaa
ggcgcaattccgtcatatgtggaaaaagtcatgttttcttccaatgcagaagaagcacac
ataataaaaatccagttacgacagactcgtcgtcctgagattggcgacaaattcagtagt
cgacatggacagaaaggagtcactgcacttgttgctgaacaagaagatctgccatttacg
gagctaggaatttgccccgatgtcattatgaatccccatggatttccatcacgtatgacg
gtcggaaagctgattgaactgcttgcgggaaaggccggacttttggaaggcaaattccac
tacggcactgcgtttggagggtctaaggtacaagatgttagtgaagaattgatcaagcat
ggatacaactaccaaggcaaagagtgtatgacgtctggtacaacaggggaacaactgtct
gcttatatttatttcgggccggtatactatcaaaaattgaagcacatggtgatggataag
atgcacgcacgatcccgtggaccaagagctgtactcacacggcagccgacagaaggtcgg
gcccgtgaaggtggcttacgtcttggcgagatggaacgagattgccttatcgcatacgga
tccagcatgttgatcttggagcgattaatgatatctagtgacgccttcgatgtcgatgtt
tgcaaccagtgcggactgatggggtattttggttggtgccattattgcaagtcaagcgca
tccgtctcttctatccgtattccctatgcttgtaaacttttatttcaggagcttcaggca
atgaacatagctccacgactcaagttggataagtactttgactga
DBGET
integrated database retrieval system