KEGG   Daphnia pulex (common water flea): DAPPUDRAFT_305037
Entry
DAPPUDRAFT_305037 CDS       T04347                                 
Name
(GenBank) hypothetical protein
  KO
K03021  DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6]
Organism
dpx  Daphnia pulex (common water flea)
Pathway
dpx03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:dpx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    DAPPUDRAFT_305037
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dpx03021]
    DAPPUDRAFT_305037
Enzymes [BR:dpx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     DAPPUDRAFT_305037
Transcription machinery [BR:dpx03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     DAPPUDRAFT_305037
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5
Other DBs
NCBI-ProteinID: EFX79076
JGI: Dappu1_305037
UniProt: E9GN85
LinkDB
Position
Unknown
AA seq 1134 aa
MGEASRDVCADLEKLLEPIKAVEEKWKLVPAFLKTKGLVKQHIDSYNYFINVDIKKIVKA
NEKVVSHSDQTFYIKYLDIHVGKPDSIEDMNHSRLTTPHECRLRDMTYSAPVTVDIEYTR
GQQRIVRNGIPIGRMPIMLRSSNCTLAGISPAEMAKKNECPYDCGGYFIVRGNEKVILIQ
EQMSKNRMIVEQDRKGNMSCQVTSSTHGTKTRTNVVVNKGKYYLKQNSFQDDIPVAIVFK
AMGIVSDQEIVQMIGTDDRVMTSFAPSLEECVRASIFTQQQALGHLGNKLRQKRFFGGPK
KTATEEARETLATTILAHVPVENFNFKAKAMYLALMIRRVIQAENDPTSVDDRDYYGNKR
LELAGSLLSLLFEDLFKRMNFELKQIADKNIPKIKAAQFDVIKHIRTDHITNGLENAIST
GNWTIKRFRMDRQGVTQMLCRLSYISGLGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCP
SDTPEGEGCGLVKNLALMTHITTEAEEEPISRIAQNMGVEDINLFSGEEISDPSIYTVFL
NGNILGLVKDYLRLIRYFKLARRHGFINAFVSIYPHFQTRSVYISSDGGRLCRPYIIVRK
GKAALTDKHMQELADSFRTFEDFIHDGLIEYLDVNEENDSNIAVYESDINEETTHLEIEP
FTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIACNQRNRIDTLLYNLVYPHKPMVK
TRTIELINFENLPAGQNAMVAVMSYSGFDIEDATVLNKASLDRGYGRCLVYKNAKCALKR
YNNQSSDRVNGPILDAASKKPIWKHDILDADGFAAVGQPVEPKQVLINKAMPTAPVVTVA
PGAPAAVPLPEYRDVPIAYKGAIPSYVEKVMFSSNAEEAHIIKIQLRQTRRPEIGDKFSS
RHGQKGVTALVAEQEDLPFTELGICPDVIMNPHGFPSRMTVGKLIELLAGKAGLLEGKFH
YGTAFGGSKVQDVSEELIKHGYNYQGKECMTSGTTGEQLSAYIYFGPVYYQKLKHMVMDK
MHARSRGPRAVLTRQPTEGRAREGGLRLGEMERDCLIAYGSSMLILERLMISSDAFDVDV
CNQCGLMGYFGWCHYCKSSASVSSIRIPYACKLLFQELQAMNIAPRLKLDKYFD
NT seq 3405 nt   +upstreamnt  +downstreamnt
atgggagaagcgagcagggatgtgtgtgcggatttggaaaaacttttggaaccaataaag
gctgttgaggaaaaatggaagcttgttccagcatttctcaagaccaaaggtcttgtaaaa
cagcacattgattcctacaactattttattaatgtagatattaagaagatagtgaaagca
aatgaaaaagttgtaagtcattctgaccaaaccttctacatcaaatatttggatattcat
gtggggaagccagactcgattgaagatatgaaccattctcggctgaccacaccacatgag
tgcagattgagagatatgacatattcagcaccagttactgtggatattgaatataccaga
gggcaacaaaggattgttcgtaatggaattccaattgggagaatgcccattatgctcagg
agctcaaattgcacactagctggtatttcacccgcggagatggcgaaaaagaatgaatgc
ccatatgattgtggaggatattttattgttcgcggaaatgaaaaagtaattttaattcaa
gagcaaatgtcaaaaaatcgcatgatcgtcgagcaggataggaaaggaaatatgtcttgt
caagtcaccagcagtacacatggaacgaagacgcgtaccaacgtcgttgttaacaaaggg
aaatactatctgaaacaaaatagtttccaagatgatataccggttgctatagtgtttaaa
gccatggggattgtgtctgatcaagaaatagtccaaatgatcggtactgatgatcgtgtg
atgacgtcattcgccccttcactagaagagtgcgttcgagcttccatcttcactcaacag
caagctctaggacatctgggtaacaaattgcgccagaaacggttttttggaggtccgaag
aaaacagcaactgaagaagccagggagacccttgctacgactattttagcccatgttcca
gtggaaaactttaatttcaaagcaaaggctatgtatctcgcattaatgattcgtcgagtt
attcaagctgaaaatgacccaacttctgttgatgatcgtgattattacggtaacaagcgc
ttggagttagccggttcacttctctccctactgttcgaggatttgtttaagcgaatgaat
tttgaattgaaacaaattgcggacaaaaacattccgaagattaaagcagctcagtttgat
gtgatcaaacacatacggacagaccacataacgaatggattggaaaatgccatatccact
ggaaattggaccatcaaacgttttcgcatggatcggcaaggtgttactcaaatgctctgt
cgattgtcgtatatttccggacttgggatgatgacacgtgtaaattctcagttcgaaaag
acacgaaaggtgtcgggaccgcgttctttacaaccttctcaatggggtatgctttgcccg
tcagatactccagaaggggagggatgtgggctcgtgaaaaatctcgcacttatgacccat
atcacaactgaagccgaggaagaacccatcagccggatcgctcaaaatatgggtgtcgaa
gatattaaccttttcagtggcgaggaaattagtgacccaagcatctacacagttttcctt
aatggtaatattctcgggttggtcaaggactacctgcggttgatccggtattttaaactg
gctcgacgccatggcttcatcaatgcattcgtgtcgatctacccgcatttccaaacgcgt
tccgtttatataagttccgatggcggtcgtttgtgccgaccttatataatcgtccgaaaa
gggaaagcagccctaaccgataaacacatgcaagaattggcagatagctttcgaaccttt
gaagactttattcacgatggattgattgaatacttggacgtgaatgaggagaatgacagc
aacattgctgtatacgaatccgacatcaacgaagaaaccactcatcttgaaattgaaccg
tttaccttgctaggcgtatgcgccggattgatcccgtatccccatcacaaccaaagtccg
cgtaacacttatcaatgtgccatgggaaaacaagcaatgggaactattgcctgcaatcaa
cgaaatcgcattgatacgcttctctacaatttggtgtacccccacaagccaatggtcaaa
actcgaacgattgaactcattaactttgagaatctccctgctggacaaaacgctatggtt
gcagtgatgagctactcaggtttcgatattgaggatgctactgttttgaacaaagcatca
ttggatcgaggttatggacgctgtctggtttacaaaaatgctaaatgcgctttgaagcgg
tacaacaatcagagctctgatcgtgtaaatggtccaatacttgatgcagcatctaaaaag
cccatatggaagcacgacattctagatgcggatggtttcgcagcagtcggtcaacctgtt
gaacctaagcaggttttgatcaacaaagctatgcctacagctcccgtggtcactgtcgct
cctggagcgcctgcagctgttcctctgccggaatatcgcgatgtccctatcgcttataaa
ggcgcaattccgtcatatgtggaaaaagtcatgttttcttccaatgcagaagaagcacac
ataataaaaatccagttacgacagactcgtcgtcctgagattggcgacaaattcagtagt
cgacatggacagaaaggagtcactgcacttgttgctgaacaagaagatctgccatttacg
gagctaggaatttgccccgatgtcattatgaatccccatggatttccatcacgtatgacg
gtcggaaagctgattgaactgcttgcgggaaaggccggacttttggaaggcaaattccac
tacggcactgcgtttggagggtctaaggtacaagatgttagtgaagaattgatcaagcat
ggatacaactaccaaggcaaagagtgtatgacgtctggtacaacaggggaacaactgtct
gcttatatttatttcgggccggtatactatcaaaaattgaagcacatggtgatggataag
atgcacgcacgatcccgtggaccaagagctgtactcacacggcagccgacagaaggtcgg
gcccgtgaaggtggcttacgtcttggcgagatggaacgagattgccttatcgcatacgga
tccagcatgttgatcttggagcgattaatgatatctagtgacgccttcgatgtcgatgtt
tgcaaccagtgcggactgatggggtattttggttggtgccattattgcaagtcaagcgca
tccgtctcttctatccgtattccctatgcttgtaaacttttatttcaggagcttcaggca
atgaacatagctccacgactcaagttggataagtactttgactga

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