Daphnia pulex (common water flea): DAPPUDRAFT_305042 Help Entry DAPPUDRAFT_305042 CDS       T04347                                  Name (GenBank) hypothetical protein   KO K20178   vacuolar protein sorting-associated protein 8 Organism dpx  Daphnia pulex (common water flea) Pathway dpx04148   Efferocytosis Brite KEGG Orthology (KO) [BR:dpx00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     DAPPUDRAFT_305042  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:dpx04131]     DAPPUDRAFT_305042 Membrane trafficking [BR:dpx04131]  Endosome - Lysosome transport   Tethering complex    CORVET complex     DAPPUDRAFT_305042 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_VPS8 TPR_Vps8 VPS8_N TPR_VPS8_2 Beta-prop_WDR36-Utp21_1st zf-RING_Vps41 zf_RING_Vps8_fungal WD40_CDC20-Fz Beta-prop_EML_2 U-box_ZFPL1 ANAPC4_WD40 zf_RING_Vps8 zf-RING_2 zf-RING_5 zf-rbx1 zf-RING_11 Motif Other DBs NCBI-ProteinID:  EFX79057 JGI:  Dappu1_305042 UniProt:  E9GNB6 LinkDB All DBs Position Unknown AA seq 1288 aa AA seqDB search MDFFYYQNWQLNSLDSSVANSSDSEEKISLSNSKPSSLPPTPCKRIEHGIILKQLVLKGI SSQLMTAQVKLKSKDATCLTVSNWIGIGTKNGLVLVFDVTQNLKWFLDTLDSPNGWGNAI SAMAFNCDHSRLLVGNACGHILEYDMKDGKLVRTLNDVHPPEAAILHLKFTDLSTLALLC DSGGSVFELGFKRTLGVRGVDTRCLFSGSRGEVCALEPLRTTDQDLNIGFDFHSKWEPLI VVAMATLSKILIVQIRPTTKVIYSQLLSGDGRSPPCLGWHFVAVHSQQRGRSIEPVLAYG RHNELHFIQLSVDEERRRLRYHPLLRFQLDFNLRGLQWLDPRMLALLDSEQQVHVVDIKT QESVDVVDLSGFNLVNSAPFFQGLATGGNVSEALALVGTEACYNSMASCAGQLLLLCATS LRSVGLRHWDERLDLLVSQARPEEAIHLGLRMLNGKAKAMHGLKGTPNQRKRQLRDKEID ILNAYVERVLIPLVMQEPSMVNSGRNLSSVIELCIDVCVQLQKQSLLFDEIYPRISSFEV ARDCFLQLLEPHFLNDRLQSISPSIMQQFVAFYEDKGWLEALESCISHVDVSSLDLHQIL TLSHNQGLCHAYLYVHTRALQDYVSPLEDLMKQLQGAVKLGPPYSEQDLKLGHVILVYIS CCLAGRAYPVGEIDEDSRIKVKHQVLTSLTCLHSKRASEDEPPYPYLRTLLEFNTQELLN ALSLAFEESEFIGEMGARRQQRVIDILVEIMINSSQFSPDQICSLFTFIARQISRSPRHD SIHLERGLFQQLVDLVCSLSSKETRVQSRFEERQQALLQLLQIKGQLSLGTEDEEKLLEQ AQSAKFYRVCEYIYEQRQDWEKVFECYIDDTSRHGDILHFLRNVFTESVASNVQLMERLI LKHIQLLVQLNATSLAVFLAVNKPALIDEAVTALIPFPHERYRFLEAILDLATQDIDGAT NTAVLIDDDGHCIEQFAELMAELEPERLTSYVQLADIPHLPRLLEICRKFAIVEAEAAIL ERQGEITAAYDLLLGQLQGSIKQLFVETEGWQDFEAASQSVIDFCQRQASSLTEKERERV WLTLLDELLLPQRSLKGNPDASASIISGLREVTQKVVTSIQGQISLTKVLPRLIEDPETT GGTLGDLRQLIMGLLDNYTYETTLLRISTRLLQGDVHSLLSQRYRQSRKGIALRASRCSS CNRLLQSGRNPSITAFQCRHAFHSSCLRGEIKQCIRCQPTPIIAEPEQDDSTVPNQEQLP VPQLSPAQLDSIYKARIGLSSALQNLFE NT seq 3867 nt NT seq  +upstreamnt  +downstreamnt atggatttcttttattatcagaactggcaactcaacagcttagactcatctgtggcaaac tccagtgacagtgaagaaaaaatttctctctcaaattcaaaaccttcttctttgccacca acaccatgtaaacgtattgaacatggaatcatacttaagcagcttgtattgaagggcatt tcatcccaattgatgactgctcaggtaaaattaaaatccaaagatgcaacatgtctaacc gtttccaactggattggtataggcacaaaaaatggtttagttttggtgtttgatgtcaca caaaatttgaaatggtttttggacacacttgattctccaaatggatggggaaatgccatt tcagcaatggcttttaactgtgatcatagtagactgttggttggaaatgcttgtggccac atcctagagtatgatatgaaagatgggaagctagtcaggactttaaatgatgtccaccca cctgaagcagctattcttcatctaaaatttacagatttgtctactcttgctcttctgtgc gatagtggaggtagtgtttttgaacttggttttaagaggactttgggagttagaggcgtt gacacccgatgcctattttcgggaagccgaggcgaagtctgcgctttagaaccgttgaga actacagaccaagatttaaatatcggcttcgattttcactctaaatgggaaccgttgata gttgttgccatggctacactttccaaaattttaatagtgcaaatacggccaaccactaaa gtgatctacagccaactgttaagcggggatggtcgaagccctccttgtcttggttggcac tttgtagctgttcatagccagcaacgaggaaggagcatagaacccgttttggcttatggt cggcataatgaacttcacttcatccagttaagcgttgatgaagaacgacgtcgactccgc tatcatcctcttcttcgtttccaacttgactttaatcttcgtggattacagtggcttgat cctcgtatgctcgctttattagattctgagcagcaagtccatgttgtagacattaaaacc caagaatctgttgatgtcgtcgacttgtctggctttaatttagtcaactcagctccgttc tttcaaggtttggcgactggtggtaacgtcagtgaagctttggctcttgtaggaaccgaa gcgtgctacaactcgatggccagttgcgctggtcagttattattactctgtgcgaccagc ttgcgttccgttggtctacgacattgggacgaaagattggatttgctcgtttcacaggca cgccctgaagaagccatccatctaggtttgcgcatgttgaacggtaaagctaaagccatg cacggattaaagggcaccccgaaccagcgtaaaagacaattaagagacaaggagattgac attctcaatgcttacgttgaacgagttttgattcctcttgtaatgcaagaacccagtatg gttaacagtggtcgaaatcttagttcagtcatcgaattgtgtatcgacgtttgcgttcaa cttcaaaaacaatcgttgctttttgatgaaatatatccaagaatttcatcgttcgaagtg gcccgagactgcttccttcaactgttagaaccccactttctcaacgaccgtttgcaatct atctcaccttctattatgcagcaatttgtagccttttatgaagataagggctggcttgag gctctggagagctgcatcagccacgtcgatgtctctagcttggatctgcatcagattctg acgttgtcgcataaccaggggttgtgtcacgcttacctttacgtgcatacacgggcgctt caggattacgtcagtccgctggaagatctgatgaaacagttgcaaggagcagtcaaatta ggtccgccgtattctgaacaagatctcaagttgggccacgtcatcctggtctacatctca tgttgtttggctggcagggcttatcccgttggagaaattgacgaagattcccgtatcaaa gtcaaacatcaagtgctaactagtctgacgtgcctgcacagtaaacgagcttcggaggat gagcctccatatccatacctgcgcactctactagagtttaatacccaagaattactcaat gctctttcattagcttttgaagaatctgaattcattggcgagatgggagcaagacgccag cagagagtaattgacattctggttgaaattatgatcaactcgtctcagttttcgccggat cagatttgctctcttttcacatttattgcccgtcaaataagtcgctcacctcgccacgac tctattcatttggaacgtggactttttcagcagcttgtagatttggtctgttctttatct tctaaagagactcgggttcaaagtagattcgaagaaaggcaacaagcactgcttcaactt cttcagattaaaggccagctatcattgggaaccgaagatgaagaaaagctacttgaacaa gctcaatccgctaaattttatcgtgtatgcgagtatatctacgagcagcgccaagattgg gaaaaggtgttcgagtgctacattgacgatacctctcgccacggcgacattcttcacttc ctgcggaacgtttttactgaatctgttgcatccaatgtccaactgatggaacgattgatt ttgaaacatatccaactgctagtccaactaaacgcaacttcattggccgtctttttggct gttaataaacctgcattaattgatgaggcggtcactgccctgataccttttccacacgaa cgatatcgttttcttgaagctattcttgatttggcaactcaagatatagatggggcaacc aatactgctgttttgatcgatgatgacggtcattgtattgagcaatttgctgaacttatg gcggagctagagccggagcgccttacgtcttacgttcaactagccgatatcccacatctg ccgcgtttgttagaaatctgccgcaagtttgccattgtcgaagctgaggcagcaattctt gaacgccaaggagagataacagccgcttacgatttactactcggccagcttcaaggttcc atcaaacaactctttgttgaaacagagggttggcaagacttcgaggctgcttctcaatca gtaattgatttttgtcagcgacaagcaagttctttaacagaaaaggaacgcgaaagggtt tggttaacccttctcgacgagttgcttcttccgcaaagaagcttgaagggaaatccggat gcttccgcttccatcatctcaggtttgagagaagttactcaaaaagtcgtgacaagcatc cagggtcaaatcagcttaactaaagtgttacctcgtttgattgaggatcccgaaacaaca ggaggcactttaggggatcttcgccaacttataatgggtcttttggataactacacgtac gagacgacattgctacggatcagcacgcgactgcttcaaggggatgtacacagtttactg tctcagcgctaccgccagtcacggaaaggtattgcgttgcgtgcgtcccgctgcagcagc tgtaatcgtctgcttcaaagcggccggaatccgtccattactgcattccaatgtcgtcac gctttccatagcagctgcttacgaggggaaatcaagcaatgtatccgttgtcagccgacg ccgatcattgcagagccagagcaagatgattctactgtccctaatcaagagcagttgcca gttcctcagttgtcacctgctcagctggattcgatctacaaggcaagaatcggattgtcc tctgcattacagaacctattcgagtga

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