Daphnia pulex (common water flea): DAPPUDRAFT_306273
Help
Entry
DAPPUDRAFT_306273 CDS
T04347
Name
(GenBank) RAD54, DNA repair and recombination protein
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DAPPUDRAFT_306273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpx03400
]
DAPPUDRAFT_306273
DNA repair and recombination proteins [BR:
dpx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
DAPPUDRAFT_306273
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
Rad54_N
zf-C2H2_assoc2
Motif
Other DBs
NCBI-ProteinID:
EFX76308
JGI:
Dappu1_306273
UniProt:
E9GW91
LinkDB
All DBs
Position
Unknown
AA seq
748 aa
AA seq
DB search
MAPSQLGQVKRKYDEDDDPAWSEKKKGGKNKKTQIIDRASEFLSPFRKPLAQCSLPVETN
SEMAGSSFHEELIKKIMSKPFKIPIPNYNGPTLSKSLGMRRAGVRQALHDPDEPGALILY
SPPELSAHDKLKSSISDKHPVHVVVDPVLTKVLRPHQREGVKFMYDCVTGLCIENNYGCI
MADEMGLGKTLQCITLLWTLLKQGPDCKPLIAKGIIVSPSSLVKNWQNEINKWLSGRVNT
LVIDSGSKDEIDRNLNGFIHTHGRRVVTPVLIISYETFRLHAHALHKGEIGLVLCDEGHR
LKNSENQTYQALVALNCKRRVLLSGTPIQNDLLEYFSLLHFVNQGILGTAQEFKKRFETP
ILRGRDADATEETQKKGQTQLKELADLVNKCIIRRTSALLTKYLPVKIELVVCIKLSPVQ
ASIYKKVVASEAVKSKMREANEKPSKSSMTALAAITNLKKLCSHPELVYEKCQSGVDGFE
GTLSLFPATFDPRKLQTELSGKLCVLDCILAMVKSTTNDKIVLISNYTQTLDLFEKLCRM
RSYPCVRLDGSMSIKKRAKIVEHFNDPASSDFVFLLSSKAGGCGLNLIGANRLVMFDPDW
NPANDDQAMARVWRDGQKKPCFIYRLLSTGTIEEKIFQRQAHKKALSSCVVDNEDDVERH
FSLSDLRDLFKLEELTSSDTHDKFKCRRCVNRIQVKPPPDDATCNSDLSQWNHCADRKTI
PDPVLKSAWDAGVTFAFHQKSHEPKIVP
NT seq
2248 nt
NT seq
+upstream
nt +downstream
nt
tatggccccaagtcagttgggtcaagttaaacgaaaatacgatgaagatgatgacccagc
ttggtcagaaaagaagaaaggaggcaagaataagaagacacaaataatagacagagcttc
agagtttctttctccatttcgtaaaccacttgctcaatgtagtcttccagttgaaaccaa
ttcagaaatggctggatcgtcattccatgaagaacttatcaaaaagattatgtcaaagcc
attcaaaataccaataccaaactacaatgggccaacccttagcaaatcacttggaatgag
acgagctggagtacgacaagctttacatgacccagatgaacctggtgctttgattttgta
ttcccctccagaactgtctgctcatgacaagctgaaatcatccataagtgataaacaccc
tgttcatgtagttgttgatccagtattgaccaaagtacttagacctcatcaacgtgaagg
agtgaagttcatgtatgactgtgtcactggtctatgcattgaaaacaattatggttgcat
tatggctgatgaaatgggattggggaaaactttgcagtgcattaccctgctttggacact
actcaaacaaggcccagactgcaagcccttaattgcaaaagggatcattgtctcacctag
tagtttggtcaagaattggcagaatgagatcaacaagtggctaagtgggcgagtcaatac
gttggtgatagactctggaagtaaagacgaaattgatcgcaatttgaatggattcataca
cacacacggaaggcgagtcgtcactcccgttctgatcatttcctacgagacatttagact
tcacgcccacgcccttcacaagggagaaataggacttgttctttgtgatgaaggacatcg
tctgaaaaacagtgaaaatcagacatatcaagctttggttgcattgaattgcaaacgccg
tgtccttctttccggaacgcccattcagaacgatctgctggagtactttagtttgttaca
tttcgttaaccaaggcattcttggcactgctcaggagtttaagaaacggtttgagacgcc
catccttcgaggtagagacgctgatgcgacggaagaaactcagaagaagggtcagacaca
actgaaagaattggccgatctagtcaataaatgcatcattcggcgcacatccgctttgct
gaccaaatatctcccagtcaaaattgaattggttgtttgtattaagctcagtcctgttca
agcgtccatttacaagaaggtcgtcgcatccgaagctgtcaagagcaaaatgagggaagc
caatgagaaaccgagcaaatcgagcatgactgcactggcagccatcaccaatttaaagaa
actatgcagtcatccggaattggtttacgaaaagtgccaatcgggcgttgacggattcga
aggcactctgtcgttatttcctgccaccttcgatccccgaaaactgcaaaccgaattgtc
cggcaagctctgcgtcctcgactgtattctggctatggtgaaaagcactaccaacgacaa
gatcgtcttgatttccaactacactcaaactctagatttattcgagaaactttgccgaat
gaggtcttacccgtgcgtacgcttggacggcagcatgagcatcaagaagagagccaagat
tgtggaacatttcaacgacccagccagttcagattttgtctttttgctcagcagcaaagc
cggtggctgcggattgaacttaattggagccaaccggttggtgatgtttgatccggactg
gaatccggccaacgacgatcaagctatggctcgtgtttggagagacggacaaaagaaacc
ctgttttatttatcgtctgttgtccactggaaccattgaagaaaaaattttccagcgtca
agcccacaaaaaggcactcagctcctgcgtagtagacaacgaagacgacgtggaacgcca
tttcagtctgtcagatttacgagatttgtttaaattggaagaactaacctcgagcgatac
tcacgacaaattcaaatgccgtcgctgcgtcaatcggatccaagtcaaaccgccaccgga
tgacgcgacttgcaattcggatttgtctcaatggaatcactgtgcggatcgcaaaaccat
tccggatcctgttctcaagtctgcttgggatgctggagtcacgttcgccttccatcaaaa
atcccacgagcctaaaattgttccttga
DBGET
integrated database retrieval system
