Daphnia pulex (common water flea): DAPPUDRAFT_306287
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Entry
DAPPUDRAFT_306287 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K10752
histone-binding protein RBBP4
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03082
ATP-dependent chromatin remodeling
dpx03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
DAPPUDRAFT_306287
03083 Polycomb repressive complex
DAPPUDRAFT_306287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dpx03036
]
DAPPUDRAFT_306287
Chromosome and associated proteins [BR:
dpx03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
DAPPUDRAFT_306287
Histone modification proteins
HAT complexes
HATB complex
DAPPUDRAFT_306287
HDAC complexes
Sin3A-HDAC complex
DAPPUDRAFT_306287
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
DAPPUDRAFT_306287
PRC2.2
DAPPUDRAFT_306287
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
DAPPUDRAFT_306287
Heterochromatin formation proteins
Other heterochromatin formation proteins
DAPPUDRAFT_306287
Chromatin remodeling factors
NuRD complex
DAPPUDRAFT_306287
NuRF complex
DAPPUDRAFT_306287
NuRF complex (fruit fly)
DAPPUDRAFT_306287
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
EIF3I
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_RIG_1st
eIF2A
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
NBCH_WD40
MIOS_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-ProteinID:
EFX76181
JGI:
Dappu1_306287
UniProt:
E9GWI6
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MADKDGEPFDEAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGK
DYSVHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDNDKGEFGGFGSVSGKIEIEI
KINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSRPDPSGECHPDLRLRGHQKE
GYGLSWNPNLNGHLLSASDDHTICLWDINASPRENRVLDAKTVFTGHTAVVEDVAWHLLH
ESLFGSVADDQKLMIWDTRSNNTSRPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVA
LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA
EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPETPAS
ELETPTN
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcagataaagatggagagccctttgatgaagcagtggaagaacgcgtcatcaacgag
gaatacaaaatttggaagaaaaatactccatttttgtatgatttggttatgacacatgct
ctggaatggccttcacttacagctcaatggcttcctgatgttacaaggcctgaaggcaaa
gactactcagtgcatcgtctcatccttggtactcacactagcgatgaacaaaatcacctc
ttgattgcatctgtccagcttcctaatgaggatgctcagtttgatgcttcacattatgac
aatgataaaggagagtttggaggctttggatcagtgagtggtaagattgaaattgagatc
aagatcaaccatgaaggagaagtcaacagggctcgctacatgccccagaatccttgtgtg
attgccactaaaacaccttcatctgacgtcttggtctttgactacacaaaacatccttct
cgccctgatcctagtggagagtgccaccctgatttacgtctgagaggacaccagaaggaa
ggttacggtttgtcttggaatcctaaccttaatggtcacttgctgtcagcatctgatgac
cacaccatttgcttgtgggatattaacgcatcgccgagagagaatcgtgttctcgacgcc
aaaaccgtattcactggccacacagcagttgtagaagatgtcgcttggcacttgcttcac
gagtccttgtttggttccgttgccgatgatcagaagcttatgatttgggatactcgcagc
aataacaccagccggccctcccataccgtggatgctcatacggctgaagtgaactgtctg
tcattcaatccttactccgaatttattttagctaccggatctgcagacaaaactgtagct
ctttgggatttgagaaatcttaaactcaaattacattcgttcgagtcgcacaaggatgaa
atctttcaagtccaatggtcaccgcataatgagactattttggcttcgtctggcaccgac
cgacgcttgcatgtctgggacttgtccaaaattggagaagaacaatccaccgaagatgcc
gaagatggccctccagaattgttgttcattcacggtggtcatacggccaagatctctgat
ttctcctggaacccgaatgagccctgggtcatctgctccgtctctgaggataacatcatg
caagtttggcaaatggctgaaaatatttacaacgacgaggagcctgagacgccagcctca
gaactggaaacccctactaattaa
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integrated database retrieval system