KEGG   Daphnia pulex (common water flea): DAPPUDRAFT_306287
Entry
DAPPUDRAFT_306287 CDS       T04347                                 
Name
(GenBank) hypothetical protein
  KO
K10752  histone-binding protein RBBP4
Organism
dpx  Daphnia pulex (common water flea)
Pathway
dpx03082  ATP-dependent chromatin remodeling
dpx03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:dpx00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    DAPPUDRAFT_306287
   03083 Polycomb repressive complex
    DAPPUDRAFT_306287
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dpx03036]
    DAPPUDRAFT_306287
Chromosome and associated proteins [BR:dpx03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     DAPPUDRAFT_306287
  Histone modification proteins
   HAT complexes
    HATB complex
     DAPPUDRAFT_306287
   HDAC complexes
    Sin3A-HDAC complex
     DAPPUDRAFT_306287
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     DAPPUDRAFT_306287
    PRC2.2
     DAPPUDRAFT_306287
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     DAPPUDRAFT_306287
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    DAPPUDRAFT_306287
  Chromatin remodeling factors
   NuRD complex
    DAPPUDRAFT_306287
   NuRF complex
    DAPPUDRAFT_306287
   NuRF complex (fruit fly)
    DAPPUDRAFT_306287
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 EIF3I WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_DCAF12 ANAPC4_WD40 Beta-prop_RIG_1st eIF2A Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st NBCH_WD40 MIOS_WD40 Beta-prop_IFT122_1st Beta-prop_DCAF4
Other DBs
NCBI-ProteinID: EFX76181
JGI: Dappu1_306287
UniProt: E9GWI6
LinkDB
Position
Unknown
AA seq 427 aa
MADKDGEPFDEAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGK
DYSVHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDNDKGEFGGFGSVSGKIEIEI
KINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSRPDPSGECHPDLRLRGHQKE
GYGLSWNPNLNGHLLSASDDHTICLWDINASPRENRVLDAKTVFTGHTAVVEDVAWHLLH
ESLFGSVADDQKLMIWDTRSNNTSRPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVA
LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA
EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPETPAS
ELETPTN
NT seq 1284 nt   +upstreamnt  +downstreamnt
atggcagataaagatggagagccctttgatgaagcagtggaagaacgcgtcatcaacgag
gaatacaaaatttggaagaaaaatactccatttttgtatgatttggttatgacacatgct
ctggaatggccttcacttacagctcaatggcttcctgatgttacaaggcctgaaggcaaa
gactactcagtgcatcgtctcatccttggtactcacactagcgatgaacaaaatcacctc
ttgattgcatctgtccagcttcctaatgaggatgctcagtttgatgcttcacattatgac
aatgataaaggagagtttggaggctttggatcagtgagtggtaagattgaaattgagatc
aagatcaaccatgaaggagaagtcaacagggctcgctacatgccccagaatccttgtgtg
attgccactaaaacaccttcatctgacgtcttggtctttgactacacaaaacatccttct
cgccctgatcctagtggagagtgccaccctgatttacgtctgagaggacaccagaaggaa
ggttacggtttgtcttggaatcctaaccttaatggtcacttgctgtcagcatctgatgac
cacaccatttgcttgtgggatattaacgcatcgccgagagagaatcgtgttctcgacgcc
aaaaccgtattcactggccacacagcagttgtagaagatgtcgcttggcacttgcttcac
gagtccttgtttggttccgttgccgatgatcagaagcttatgatttgggatactcgcagc
aataacaccagccggccctcccataccgtggatgctcatacggctgaagtgaactgtctg
tcattcaatccttactccgaatttattttagctaccggatctgcagacaaaactgtagct
ctttgggatttgagaaatcttaaactcaaattacattcgttcgagtcgcacaaggatgaa
atctttcaagtccaatggtcaccgcataatgagactattttggcttcgtctggcaccgac
cgacgcttgcatgtctgggacttgtccaaaattggagaagaacaatccaccgaagatgcc
gaagatggccctccagaattgttgttcattcacggtggtcatacggccaagatctctgat
ttctcctggaacccgaatgagccctgggtcatctgctccgtctctgaggataacatcatg
caagtttggcaaatggctgaaaatatttacaacgacgaggagcctgagacgccagcctca
gaactggaaacccctactaattaa

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