Daphnia pulex (common water flea): DAPPUDRAFT_306329
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Entry
DAPPUDRAFT_306329 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DAPPUDRAFT_306329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpx03400
]
DAPPUDRAFT_306329
DNA repair and recombination proteins [BR:
dpx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
DAPPUDRAFT_306329
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
BHD_1
Rad4
BHD_2
Transglut_core
Motif
Other DBs
NCBI-ProteinID:
EFX75946
JGI:
Dappu1_306329
UniProt:
E9GWR6
LinkDB
All DBs
Position
Unknown
AA seq
506 aa
AA seq
DB search
MKWVAKHFKVSTPRVTQSNPEVKDILNCISSGRAQSVEELVYTCVAVCRSLGILSRLVLS
LQPLPAKRNKESSSDEFEEPTSDDSEIQEKSTTSTKNKSHAAQSHAQTRSKKIISTDSEG
DALAKKKKTTDVWMEVYLEQEEQWMSVDVISGHIHCDRHLERNASDPLLYAVAYNFDLTW
KDVTARYASSFLSTTRKQRAHPTWSKLLNIHREKPSPRSKAEDESMEKSLSDRPMPTSIS
EFKSHPLYALQRHLLKFEAIYPPTAIPVGYIRKEPVYARECVKNLHSRETWLKEAKVVRV
SEKPYKVVKARPKWDRYSQKMVTDQPLEIFGDWQIEDYIPPPAVDGVVPRNAYGNVELFL
PSMLPKGTKHLQIPGLNKVARRLGIDCAPAMTGWDYHSGWSHPVYDGFVVCEEHVETLMD
AWQAANEEQEQREREKHEKRVYDNWRRLIRGLLIRERLQAKYFRNVTEDDLPPVIDGAEK
EVSQTSLSNKNEKSTKKPTTNKRKKK
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgggtagcaaaacactttaaagtgagcacaccgagagtaacccaaagtaatcca
gaagtaaaagacatattaaactgtatttcctctggtagagctcagagcgttgaagaatta
gtttacacctgcgttgccgtgtgccgttcattaggtattttatctcggctggttttatct
cttcaacctttaccggctaaacgtaacaaggaaagttcttctgacgagtttgaagaaccc
acttctgatgattccgaaatccaagagaaatctacaacttcgacaaagaacaagagtcac
gctgctcaaagtcatgctcaaacacggtctaagaaaatcatttccactgacagtgaaggc
gacgctttagcaaaaaagaagaagactacagacgtatggatggaagtctatttagaacag
gaagaacagtggatgagtgtggatgtcatttctggtcatattcattgtgatcgtcattta
gagcggaacgcatccgatccgcttctatacgcagtggcttacaattttgatctgacatgg
aaggatgtaacagcccgctatgcttcctcgtttttgtcgactactcgcaaacagcgagca
catcctacctggagtaaacttttgaatattcatcgagaaaaacctagtcccagatccaag
gccgaagacgaaagcatggaaaaaagcctctctgatcgacccatgcccaccagtatctca
gagttcaagtctcatccactctatgctcttcagcggcacttgctaaagtttgaagcaatt
tatcctccaactgccattccagtgggttacatacgtaaggaacctgtgtatgcaagggag
tgcgtaaaaaatcttcattcacgagaaacttggctgaaggaagccaaagttgttcgagtg
agtgaaaagccgtacaaagtagttaaggcccgtccaaaatgggatcgctactctcaaaaa
atggtgactgatcagcctctcgaaatattcggcgattggcagattgaggattacattcct
cccccagcagttgatggtgtcgttccacgaaacgcatatggtaacgtagaattgtttcta
cctagcatgttaccgaaagggaccaagcaccttcaaattccaggtttgaacaaagttgca
aggagactaggaattgattgcgctccagctatgacaggatgggattaccacagtggttgg
tcgcatccagtctacgatggatttgttgtttgtgaagaacatgttgagactctaatggat
gcttggcaggcggctaacgaagaacaagagcagcgtgaacgagagaagcatgagaaacgt
gtttacgataactggcgaaggctgatacgaggcttgctcatcagagaacgcctacaagcg
aaatacttcagaaacgttactgaagacgatttacctccagtcattgatggagctgagaag
gaagttagtcaaacctcattgtccaacaaaaacgaaaaaagtacaaaaaaaccaactacg
aacaaacggaagaaaaagtga
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