KEGG   Daphnia pulex (common water flea): DAPPUDRAFT_306381
Entry
DAPPUDRAFT_306381 CDS       T04347                                 
Name
(GenBank) hypothetical protein
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
dpx  Daphnia pulex (common water flea)
Pathway
dpx03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:dpx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    DAPPUDRAFT_306381
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dpx03021]
    DAPPUDRAFT_306381
   03036 Chromosome and associated proteins [BR:dpx03036]
    DAPPUDRAFT_306381
Transcription machinery [BR:dpx03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     DAPPUDRAFT_306381
   Coactivators
    SAGA/TFTC/STAGA complex
     DAPPUDRAFT_306381
Chromosome and associated proteins [BR:dpx03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     DAPPUDRAFT_306381
    STAGA complex
     DAPPUDRAFT_306381
    TFTC complex
     DAPPUDRAFT_306381
    SAGA complex
     DAPPUDRAFT_306381
    SLIK complex
     DAPPUDRAFT_306381
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_EML WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_DCAF12 Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_DCAF4 PROPPIN Beta-prop_WDR19_1st WD_LRWD1 Beta-prop_HPS5 Beta-prop_NWD2_C Beta-prop_WDR35_TULP_N Beta-prop_RIG_1st RAB3GAP2_N bpX2
Other DBs
NCBI-ProteinID: EFX87789
JGI: Dappu1_306381
UniProt: E9FYD6
LinkDB
Position
Unknown
AA seq 455 aa
MNVSGNMIGARGFYTRNQSNFLKVPELRKMAEKFCSENNSHFILELSSESFEVLHSYIGS
NDHPLLQQLLNTTLEVNIIKSKIDTSNANQANPKTIVDSSNMEEVHGLLAAISRLKEVPP
TAPLLKLYSIDTGQRKMSAASASPCENYLSCGFQDSSVAIWDVKKLRSPSKSDLTRLDLS
EACAISIYHPATSAPLPTESDSSVSVCLGHSGPVYATQFTPTNSHVLSCSDDTTLRLWEI
SSMENVFVYRGHTYPVWDVNISQNGQFFASASQDRTAKIWMFDRTYPLRILAGHTADVDC
VTFHPNGLYLATGSADSCVRMWNVAEGKTVRILVGHCGTVLSIAFSPCGTLLASAGEDHR
VIVWDVAAGRILHDYTGHQYVVHGLVWISEHVLCSYSADGNIRVWNVAHPSTSSVTPASQ
LQQQELASYQVASPAKIVHLGRGSRDSLVCIAASD
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgaatgttagcggtaacatgattggggctagaggattttatactcgaaaccagtcaaac
tttttaaaagtgcctgaactaagaaaaatggctgaaaaattttgttctgaaaacaatagc
catttcattctggaactgtcaagcgaatcctttgaagtgttgcatagttacattgggagc
aatgatcacccactattgcaacagctactcaacaccaccctggaggtaaacatcatcaaa
tcgaaaattgataccagcaatgctaatcaagcaaatccaaaaaccatagttgattcgtca
aatatggaagaagtgcacggtttgttggccgccatatctcgattgaaagaagttcctccg
actgcccccttgctgaaattgtactctatcgacacggggcaaagaaaaatgagtgcagct
tcggcatcaccttgtgaaaactatctctcttgtggatttcaagattcctccgttgctatc
tgggatgttaagaaacttcggtcaccctccaaatctgatctcactcgattagacctctcg
gaagcctgcgccatcagcatttatcacccagcaacttctgcaccgcttccaacagaatcg
gactcttctgtctcagtttgcttggggcattccggtccagtctatgccacacagtttacc
cctactaatagccacgtgctaagttgtagtgacgatacaactctaaggctttgggagatc
tcttccatggaaaatgtgtttgtttaccgaggacacacttaccctgtgtgggacgtgaac
atatctcaaaatggacaatttttcgcttctgcctcgcaagaccgaactgccaaaatttgg
atgtttgatcgtacataccctctacgaattctagccggtcatactgccgatgttgactgt
gtgaccttccatccaaatgggttgtatttggccacaggatcagctgatagttgtgttcgt
atgtggaatgttgctgaaggaaaaactgttcgaatcttagttggccattgcggcacagta
ttatccattgctttcagcccttgtggaacgttgttggcatcagctggtgaagaccatcgt
gtgatagtttgggatgttgcagctgggcgtattcttcatgattatactggccatcaatat
gtcgttcacggattggtttggatttccgaacatgttctctgttcttacagtgcagatggt
aacattcgcgtgtggaatgtcgcacatccgtccacgtccagtgtgacaccagcgtcacaa
ctacaacagcaagagttagcttcttaccaggttgcgtcacccgcgaaaattgtccatctt
ggtcgaggtagccgggatagtttggtctgcatcgccgcctctgattaa

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