KEGG   Daphnia pulex (common water flea): DAPPUDRAFT_307153
Entry
DAPPUDRAFT_307153 CDS       T04347                                 
Name
(GenBank) hypothetical protein
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
dpx  Daphnia pulex (common water flea)
Pathway
dpx03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:dpx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    DAPPUDRAFT_307153
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dpx03021]
    DAPPUDRAFT_307153
   03036 Chromosome and associated proteins [BR:dpx03036]
    DAPPUDRAFT_307153
Transcription machinery [BR:dpx03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     DAPPUDRAFT_307153
   Coactivators
    SAGA/TFTC/STAGA complex
     DAPPUDRAFT_307153
Chromosome and associated proteins [BR:dpx03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     DAPPUDRAFT_307153
    STAGA complex
     DAPPUDRAFT_307153
    TFTC complex
     DAPPUDRAFT_307153
    SAGA complex
     DAPPUDRAFT_307153
    SLIK complex
     DAPPUDRAFT_307153
SSDB
Motif
Pfam: WD40 WD40_Prp19 TFIID_NTD2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_EML WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_VPS8 Beta-prop_WDR75_2nd Ge1_WD40 Beta-prop_WDR19_1st WD40_RFWD3 WD_LRWD1 PROPPIN LisH WDR54 ELYS-bb Beta-prop_Nup120_160 Beta-prop_RIG_1st
Other DBs
NCBI-ProteinID: EFX87221
JGI: Dappu1_307153
UniProt: E9FZR3
LinkDB
Position
Unknown
AA seq 696 aa
MEFDMNQISQTSNSNAKIEASESQNSKVSSENSAVQPVETENVDSNTLAAVLQFLQKHNL
KGTADILKKEARLKEDQLRDAQALQVDSEATNLLSSYKSEGDPNAYEKAYLSYRRFVESS
LDVYKHELSLVLYPLFVHMYLEMIYNQHESEAAKFMERFSTDQEDYYQDDLKKVSFITKK
EHMKGSDLMENFKSSQFTVRMSRDTYSVLKRFLQDKNQSIVMNVIQEHLYVDMYEGVPRN
KAQVESTAGAMEGEANRQVNKTKIYYGLLKEPDIQLPVVEEEEDGEPGEGGEKPKKKKPK
KDPLLNKKAKSDPNAPPASRLPLPDLRDIDKLEKVRALREASKRVALGPDNLPSICFYTM
LNCAETVTCVEFCEDSSLLAVGFSDSILKVWSLVPQKLRAMKPAEQLADIDKEAEDVLVR
MMDDKTGETMKVLHGHCGPVYAASFSHDRTLLLSSSEDATIRLWSLQTWTCLVVYKGHIY
PVWDVRFSPHGYYFSSVGHDRTARLWATDHHQPLRIFAGHYSDVDVVQFHPNSNYVATGS
SDRSVRLWDCVTGNCVRLMTGHKGTVSALCFSTDGRFLASGGADQKVLLWDLAHGHLLAD
LPGHTMTISSLAFSRDGTVFATSSLDGSIQLWDFFRMTDESSLEDVNISGHNPDLLKRSN
AIESLRLARYPTKATPVMSLHFTRRNLLLAAGMFEG
NT seq 2091 nt   +upstreamnt  +downstreamnt
atggagttcgatatgaatcagatatctcaaacaagcaattcaaacgcgaaaattgaagca
tctgaaagtcaaaacagtaaagtttcaagtgaaaacagtgcagttcaacctgtagaaaca
gaaaatgtcgactccaatacccttgcggccgtattacagtttcttcagaagcacaacctg
aaagggacggctgatattttgaaaaaagaagcacggctcaaggaggatcaattacgagat
gcacaagctcttcaagtggattcagaggcaacaaatttgctctcatcatacaagagcgaa
ggagacccaaatgcctacgaaaaagcttaccttagttacaggagatttgtggaaagctcg
ctggatgtttataaacatgagctgtccctagtattgtaccctttgtttgtccacatgtat
ttggaaatgatctacaaccaacatgaatcagaagccgctaaatttatggaacgtttttca
acagatcaggaagattattatcaggatgatcttaaaaaagtttcttttattaccaaaaaa
gagcacatgaaaggcagtgatctcatggagaatttcaaatcaagtcagttcaccgttcga
atgtcccgggatacttactcggttttgaagcggtttttgcaggacaagaaccaatcaatc
gtcatgaacgtcattcaggaacacttgtacgtcgacatgtacgaaggagtgccgagaaat
aaagctcaagttgaatctacagccggagccatggaaggcgaggccaacagacaagtaaac
aagaccaaaatctactatggtctgctcaaagagcccgatatccagcttccggtagtcgag
gaggaagaggacggagaacccggcgaaggtggtgaaaagcccaaaaagaagaaacccaaa
aaggatccgttgctcaacaagaaagccaaaagcgaccctaatgctccaccggccagccga
ttgccattaccagatttgagagatatcgacaaactggagaaggtcagggccctacgagaa
gccagcaagagggtggctcttggtccagacaatttgccgtccatttgtttctacaccatg
ctgaattgcgcggaaacggtcacgtgcgtcgaattctgcgaggattcgtcactattagcc
gtagggttttccgattccatcctcaaagtttggagtcttgtaccccagaaactccgggcc
atgaaaccggccgagcaattggccgatattgacaaggaggctgaagatgttctcgttcgt
atgatggacgataagacgggtgagactatgaaagtccttcacggccattgcgggccggtt
tacgctgcctcgttcagtcacgaccggacgttactcctatcatcgtcggaagatgccacg
atccggctgtggagtttgcagacgtggacctgcctggtggtctataaaggccacatttac
cccgtgtgggacgtgaggttctcccctcacggctactatttctcatcagtcggacatgat
cggactgccagactttgggccaccgatcatcaccagcctttaaggatctttgccggccat
tattcagacgtcgacgtggtccaattccaccccaattccaattacgtcgccacaggttcc
agcgataggagcgtccgtttatgggattgcgtaactggcaactgtgtccgactaatgact
ggtcataaaggaaccgtctcggcgttgtgtttctccaccgacggccgttttctggcatcc
ggcggagctgatcaaaaagtcctgttatgggatctggctcacggtcacctattggccgac
ctgcctgggcacacgatgacaatctccagtttggccttcagtcgagacgggaccgtgttc
gccacgtcttccctggacgggtccatccaactgtgggatttcttccggatgacggatgag
tcctctttagaggatgtcaacatctcgggacacaatccagacctcctcaagcggagtaac
gccattgaatcgctccgcctggctcgttacccgaccaaagccactcctgtcatgtcattg
catttcacgcggaggaatttgctactcgctgccggcatgtttgaaggctaa

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