Daphnia pulex (common water flea): DAPPUDRAFT_307295 Help Entry DAPPUDRAFT_307295 CDS       T04347                                  Name (GenBank) hypothetical protein   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism dpx  Daphnia pulex (common water flea) Pathway dpx04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:dpx00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     DAPPUDRAFT_307295  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:dpx00536]     DAPPUDRAFT_307295 Glycosaminoglycan binding proteins [BR:dpx00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    DAPPUDRAFT_307295 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Motif Other DBs NCBI-ProteinID:  EFX74470 JGI:  Dappu1_307295 UniProt:  E9H1N7 LinkDB All DBs Position Unknown AA seq 1289 aa AA seqDB search MAMQGSPGPQGMTGIHGPTGPPGSEGQKGEPGDTGEPGPRGLRGMMGLPGREGKRGRPGR DGERGSTGPPGVKGEQGNQGLLGLPGEKGDRGEVGNPGDVGQPGHDGQQGEDGAAGLPGM PGEMGPRGFPGQRGFPGLPGPPGIPGSEGITGPKGNTGPSGGPGAPGQTGPNGPIGPPGP QGVLGPPGTAGPRGKPGLPGLPGADGLPGPSGNPGTPGSKGDTGSTGAQGPVGFPGVRGP KGDQGARGPLGEKGDKGDKGHDGEKGDVGQKGERGPQGLQGTAGLEGPEGPKGFEGPRGE AGPPGPTGEKGKLGVPGFPGYPGPPGEKGDKGTPGRPGTPGDKGDRGNTGTPGERGEQGP RGFRGSRGRTGKQGVTGPKGDTGQPGPPGTIGERGLPGAEGVRGLTGQQGLPGIHGKDGV AGPPGERGPPGQPGADGPIGAPGVVGLPGQTGEGGPTGEPGEAGPPGAPGEPGHSGDAGK EGPQGPPGPQGKQGPIGPSGLPGFPGERGLAGLPGMPGLKGEMGPVGPAGPAGDKGQQGE SGKEGPPGPEGRAGQQGAVGPSGAKGDTGDPGIPGPTGRDGLPGQRGLPGPPGPMGPPGE DGDKGEPGKPGEKGFKGGKGDAGPPGPNGNPGLRGEVGPIGPPGERGPPGDIGRRGGKGE DGPQGPGGPPGPIGNQGLPGPGGTKGEKGDFGQKGPVGPPGTPGEQGATGTKGVQGLPGA TGPEGPQGPKGETGNTGPPGPPGQDGAHGKRGPAGPKGEEGKPGIQGAPGPRGVAGPEGP KGSPGNPGFPGPNGESGEQGPKGEPGKDGLDGKAGETGLPGEAGAPGKMGLPGSPGKPGP EGPAGVQGNTGQPGDKGDIGIQGLPGPQGAPGDQGVHGPQGPPGLRGSPGPAGDVGPPGK PGKAGNPGPNGEAGIRGEKGDRGRRGPKGHRGELGAAGRKGEVGEKGEGGERGTQGPVGP KGEAGPLGPMGQKGNDGPQGLPGLEGPPGPKGAEGQTGPKGDSGPSGPPGPPGPPGELPL LPPELLFQRDSPATPSGRKKRENADGEEDGKSDDGPKEDLNGKLLDMYSSIYTMRQDLER IKKPQGSKENPVRSCKDLYFGHPQFKDGWYWIDPNLGMPDDAIYVFCNMTGSGETCVYPD LQSSKMPNIPWRKEVGGKEEWYSNMRGASKVTYETVGVVQMTFLRLLSQKAHQNFTFTCV NSAAWYNQRTFNYDQAIKLLGDNEQEFSAKGVRPNVILDGCKNRKGSSKTVFEIRSDKLG QLPIIDFFPVDYGQPHQAFGFEVGPVCFK NT seq 3870 nt NT seq  +upstreamnt  +downstreamnt atggctatgcaaggctcgcccggaccgcaaggtatgactggtattcacggccccaccggc ccgcccggatcggaaggtcagaaaggagaacccggtgataccggagaaccgggtcctcga ggtcttcgtggcatgatgggtctaccaggacgagaaggtaaacgcggtcgtcctggccgt gatggcgagcgcggttcaactggcccaccaggagttaaaggcgaacaaggcaaccaagga ttactgggattgccaggtgagaagggagaccgcggtgaagtaggaaatcccggagatgtc ggtcaacctggacacgatggacaacaaggtgaagacggagctgctggtttgcccggcatg cctggagaaatgggcccgcgtggattccccggacaaagaggcttccccggtcttccaggt ccacctggaatccctggaagtgaaggtataaccggtcctaaaggtaacaccggcccatct ggaggccccggagctccaggtcaaacgggacccaacggcccgattgggccacctggcccg caaggtgttttaggcccgcctggaactgccggccccagaggaaaacccggcttgccaggt ttacctggagctgatggcttgcctggaccttccggtaaccctggaactcccggatctaaa ggagacactggaagcactggagcacagggtccagttggtttccctggtgtccgtggaccg aaaggtgaccaaggcgctcgcggaccattgggcgagaaaggtgacaagggggacaaagga catgacggcgaaaaaggtgacgtcggccaaaagggcgaacgagggccgcaaggtcttcaa ggcactgctggtttggaagggccagaaggaccgaaaggtttcgaaggtccgcgaggtgag gctggaccaccaggtccgacgggagaaaaaggaaaattgggcgtacccggtttccctggc tacccgggtccacccggcgagaagggagacaaaggcacacctggacggcctggaacaccc ggcgacaaaggagatcgaggcaacactggaactccaggagaacgtggagagcagggtccg cgaggtttcagaggatctcgcggtcgtacgggcaaacaaggcgtgactggacctaaaggt gacactggacaacccggcccaccaggcacaatcggagagcggggtctgccgggagctgaa ggagtccgaggtcttaccggtcaacagggtcttcccggtattcacggcaaggatggagtg gcaggaccaccgggcgagcgtggaccaccaggtcaaccaggtgccgatggacctattgga gctcctggtgtagtaggattaccgggtcagactggcgagggaggtccaactggagaaccc ggagaagcaggacctccaggtgcacctggagaacctggacactctggtgacgctggcaaa gaaggtccccaaggcccacctggacctcaaggcaagcaaggccctattggaccttcggga ttgccaggtttccccggcgagagaggactcgcaggattacctggaatgcccggacttaaa ggagaaatgggtccagttggcccagctggtccggcaggagacaaaggacaacagggagaa tctggcaaggaaggacctcctggtcctgaaggaagagcaggtcaacagggagctgttgga ccttctggtgccaaaggtgacacgggagatcctggaatcccaggacccactggtagagat ggacttccaggacagcgcggtttaccggggccaccaggtcctatgggtccaccaggagaa gacggtgacaagggtgaacctggtaaacccggtgagaaaggattcaaaggcgggaaagga gatgctggacctcccggacccaacggtaatcccggtttgcgtggagaagtgggacctatc ggcccgcccggtgagagaggccctcctggtgacattggtcgacgaggtggtaaaggagaa gacggtcctcaaggccctggtggacctcctggcccaattggaaaccaaggtcttcccggc cctggtggcactaaaggagagaagggagatttcggtcaaaagggtcccgtcggtcctcct ggaactcccggagagcaaggagctactggtactaaaggagttcaaggtttgcctggcgcc actggaccagaaggtcctcaaggacctaaaggtgaaacgggaaatactggacctcccggg cctcctggacaagatggagctcacggtaaaagaggacccgctggacctaaaggtgaagaa ggcaagccaggtattcaaggagcacctggtccgcgaggagttgctggccctgaaggtccc aaaggtagcccgggcaatccaggcttcccaggaccaaacggtgaatctggcgagcaagga ccgaagggagaaccgggcaaggatggtttggacggcaaagcgggcgagactggtcttcca ggagaagctggtgctccgggtaaaatgggtttgccaggctcacccggtaaacctggacca gagggacctgccggcgttcagggcaacacgggccaacctggagacaagggtgacattggc atccaaggcttgcctggacctcaaggtgcgccaggagatcagggtgttcacggaccccaa ggacctcctggacttcgtggatcaccgggacccgcgggagatgttggacctccaggcaag cccggcaaagccggtaaccctggaccgaacggtgaagctggtataagaggcgagaagggc gatcgcggccgaagaggacctaaaggacatcgcggagaattgggagctgctggacgtaag ggtgaagtcggagagaagggtgaaggtggagaacgtggtacccaaggtcccgtcggacca aaaggagaagccggacccctcggaccgatgggtcaaaaaggaaacgacggacctcagggc ttgcctggattggagggacctccaggacctaaaggagctgaaggacagactggtcctaag ggagactctggaccttcgggacctcctggacctcccggcccaccgggcgaattgcctctt ctgccgcctgaattgttgttccaacgagacagtccagcgaccccgtccggtcgaaagaag cgcgaaaacgccgacggtgaagaagatggcaagtcggacgacggacccaaagaggatttg aatggcaaactgttggacatgtacagttcgatctacacgatgcgacaggacctggagcgc atcaagaaaccgcaaggctccaaagagaatccggttcgttcgtgcaaggatttgtacttt ggccatccccagttcaaagacggttggtactggatcgatcccaacttgggcatgccggac gacgccatttacgtcttttgtaacatgactggctcgggcgagacgtgcgtctacccggac ctgcagtcgtccaagatgcccaacattccttggcgcaaggaggtcggcggcaaggaagag tggtactcgaacatgcgtggcgcttccaaggtgacgtacgaaacggtgggcgtggtccag atgaccttcctgcgcctcctgagtcaaaaagcccatcagaatttcaccttcacctgcgtc aactcggccgcctggtacaatcagcgcaccttcaattacgatcaggccatcaagctgctg ggcgataacgaacaggaattcagcgccaaaggagtccgacccaatgtcattctagacgga tgcaaaaatcgcaagggcagcagtaaaaccgtgttcgaaattcgcagcgacaagctgggc cagttgcccattatcgatttcttcccggtcgattacggtcaacctcaccaggcctttggt ttcgaagtcggtcccgtctgtttcaaatga

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