Daphnia pulex (common water flea): DAPPUDRAFT_307893
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Entry
DAPPUDRAFT_307893 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K14793
ribosomal RNA-processing protein 9
Organism
dpx
Daphnia pulex (common water flea)
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpx03009
]
DAPPUDRAFT_307893
Ribosome biogenesis [BR:
dpx03009
]
Eukaryotic type
90S particles
Other 90S particles
DAPPUDRAFT_307893
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_IP5PC_F
Beta-prop_WDR75_2nd
Beta-prop_DCAF12
Beta-prop_IFT140_1st
WD40_like
DUF4520
WDR54
DUF7099
Peptidase_M2
Motif
Other DBs
NCBI-ProteinID:
EFX86622
JGI:
Dappu1_307893
UniProt:
E9G172
LinkDB
All DBs
Position
Unknown
AA seq
458 aa
AA seq
DB search
MSFFIRKNQRGAKRKNGATVTDSRPKTYKEKKRLAHDDEISSHSEGENDDSKVYSESEDE
ETVQEKRLRLTKEYIQEIENQERLRREEEDIDKSIIAHRLKEDLLEQSGRLRRTVADSYD
KIDETLIKHLHCKDHKQPITCLTISPDCQSLFTASKDCTIVKWSLVEFKKVAVIKRVEKK
ASREIKGHKTVVQSLTISSDGKFLASGDLENQVHIWDPITLKWLHTFKGHRAGITGLVFR
RGTHTLYSASMDRTVKIWNLDEMSYVETLLGHQDAITSIDALTKERAITAGGRDNSVRVW
KIPEESQLIFNGHQGSIDCVRLVNEDHFVSCGDDGMLSLWGSQKKKPLFSIPNAHGVDES
NNQANWISSVAALTNTDLIASGSQDGFIRLWKCGENFRNLSPLMSVPACGFVNSLAFSSD
GKMLIAGLGQEHRLGRWWRNGSAKNEILIIPLKQHEKS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttttcattcgcaaaaatcaacgtggtgccaaacgcaagaatggagcaacggtc
actgacagcagacccaaaacttataaagaaaaaaagcgtttggctcatgacgacgagatt
tctagccactccgaaggagaaaatgacgattcaaaagtctactcagaatctgaagacgaa
gagacggtacaagaaaagagactcaggctaacgaaagagtatattcaagaaatcgaaaat
caggaacgtttaagaagagaagaggaagatattgacaaatcaattattgctcatagactg
aaagaagatttacttgaacaaagtggaagactgagaagaactgttgcagattcatatgac
aagattgatgaaactttgatcaaacatttgcattgcaaagatcacaagcaacccattacg
tgtttgacaatatcacctgattgtcagtccctttttactgcatcaaaggattgcacaatt
gttaaatggtctcttgtagaattcaaaaaagttgccgtgatcaagagggttgaaaaaaaa
gcttcccgtgaaatcaagggccacaagactgtagtgcaaagtcttactatttcctctgat
ggaaaattcttggctagcggtgatctggaaaatcaggttcacatttgggatcccatcaca
ctgaagtggttgcacacatttaaaggacatagagctggtattaccggtttagtttttcgt
cgaggtacccatacgttatatagtgcttcaatggatcgtactgtgaaaatatggaatttg
gatgaaatgtcttacgtagaaacactattaggtcatcaagatgccatcacttccatcgat
gccttgactaaagaacgagcaattacggcaggcgggcgggacaattctgttcgtgtttgg
aagatacctgaagagtcgcagcttatttttaatggacatcaaggatccatcgactgcgtt
cgtctcgtaaatgaagatcacttcgtcagttgtggagatgatgggatgctgtcattgtgg
gggtctcaaaagaaaaaaccactgtttagtatacccaacgcccacggagtcgatgaatcg
aataaccaagccaattggatatcttccgttgctgctctgacgaatacagaccttattgca
tcaggatcccaagacggtttcattcgtctctggaaatgcggtgaaaatttccgtaatttg
tcgccgcttatgagtgtcccagcttgcgggttcgtgaattcattggctttttcctccgat
ggtaagatgttaatcgccggtcttggacaagaacaccgacttggtaggtggtggaggaat
ggatcggctaaaaacgaaatccttatcattccgctcaagcaacatgaaaaatcatga
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