KEGG   Daphnia pulex (common water flea): DAPPUDRAFT_308127
Entry
DAPPUDRAFT_308127 CDS       T04347                                 
Name
(GenBank) hypothetical protein
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
dpx  Daphnia pulex (common water flea)
Brite
KEGG Orthology (KO) [BR:dpx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:dpx03009]
    DAPPUDRAFT_308127
   04121 Ubiquitin system [BR:dpx04121]
    DAPPUDRAFT_308127
Ribosome biogenesis [BR:dpx03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    DAPPUDRAFT_308127
Ubiquitin system [BR:dpx04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     DAPPUDRAFT_308127
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 Sof1 Beta-prop_EML_2 WDR55 WD40_WDHD1_1st Beta-prop_EIPR1 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st ANAPC4_WD40 WDR90_beta-prop_4th MIOS_WD40 eIF2A Beta-prop_NUP159_NUP214 Beta-prop_IFT122_1st PROPPIN Beta-prop_SPT8 Beta-prop_SCAP
Other DBs
NCBI-ProteinID: EFX72618
JGI: Dappu1_308127
UniProt: E9H698
LinkDB
Position
Unknown
AA seq 453 aa
MDIFSDDSKMKVKVLVRNPDDYLRETKRDIHKLPRNYDPALHPLEAPREYTRALNAVKLE
RVFALPFIGCLDGHRDGLSCLGKTPDHLSWLYSGACDGELKLWDVAKRRVLCTVQAHDGF
VRAIAYSQESSFLYTVGDDKLIKQWKSEAEDGSDLKAPVNTILTGGMLTGISPHRSKPIL
ATCGEACNLWEHTRAQPIKTFQWGVDSLQSIKFNQVEENILAACGSDRSIILYDMRESVP
LRKVVLKMRSNSICWNPMEAFIFTVANEDYNLYTFDMRNLNSPLNVHSDHVSAVIDVDYS
PTGKEFVSASYDKTVRIYDARQAHSRDIYHTKRMQRLTCAAWSLDDRFIFSGSDEMNIRI
WKARAAEKLGVVKPREKTALRVNAKLIEKFEHHPHIKKIQRHRHVPKHVYNARNELRSGR
IAARRKEFNVRTHTKRQKPIISEKVKAIVSEQQ
NT seq 1362 nt   +upstreamnt  +downstreamnt
atggacatattcagcgacgactcgaaaatgaaggtgaaagttttggtgcgaaatcctgac
gactacttgcgtgaaacaaaacgagacatccataaattacccaggaattatgatccagca
ttacatccattggaagctcctagagaatatactcgtgcactgaatgcagttaaattggag
agagttttcgccttgccttttattggctgcctcgatggtcaccgtgatggattgtcttgc
ctaggcaaaactccagatcacttatcatggttgtacagtggagcctgtgatggagagctg
aaactgtgggacgttgccaaacggagagtattgtgcacagtccaagctcacgatggattt
gtgagagccattgcatacagccaagaatcttcatttttatacacagttggagacgacaaa
cttatcaagcagtggaaatctgaagcagaagatggcagtgatttaaaggccccagtaaac
acaattttgactggtggcatgctgacaggcatcagtcctcatcggtcaaaaccaattctg
gccacatgtggtgaagcttgtaatttgtgggagcatactcgtgcccaacctatcaagact
ttccagtggggtgttgacagcttacaaagcatcaaattcaatcaagttgaagaaaatatt
ttagctgcctgcggcagtgatcgcagtatcatcttatatgacatgagggagtcggttcct
ctgaggaaagtcgttctgaagatgcgcagcaattctatttgttggaatcccatggaagcc
ttcatcttcacggttgccaacgaggattacaatttgtacacatttgacatgcggaatctc
aattcaccgctcaacgtccacagtgatcacgtctcagccgtcatcgatgtcgactattcc
ccgactggcaaagagtttgtcagcgccagttacgacaagacggtccgcatctacgatgcc
cgtcaggctcattcgagagatatttaccacacaaagcgcatgcagcgactaacctgcgcc
gcctggtctctagacgaccgtttcatcttctccggttcggatgaaatgaacatccgcatc
tggaaagctcgtgccgctgagaaacttggagtggtcaaacctcgagagaagacagccttg
cgagttaacgccaaattgattgaaaaattcgaacaccatccacacatcaagaagattcag
cgccaccgacatgtgcccaaacacgtttacaacgcccggaacgaattacgaagtggccgg
attgcagccagacgaaaggaattcaacgtccgtactcacacgaaacggcaaaaacccatc
atatccgaaaaggtcaaagcgatcgtttcggagcagcaatga

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