Daphnia pulex (common water flea): DAPPUDRAFT_308561
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Entry
DAPPUDRAFT_308561 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03020
RNA polymerase
dpx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DAPPUDRAFT_308561
09124 Replication and repair
03420 Nucleotide excision repair
DAPPUDRAFT_308561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpx03021
]
DAPPUDRAFT_308561
03019 Messenger RNA biogenesis [BR:
dpx03019
]
DAPPUDRAFT_308561
03400 DNA repair and recombination proteins [BR:
dpx03400
]
DAPPUDRAFT_308561
Transcription machinery [BR:
dpx03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
DAPPUDRAFT_308561
Messenger RNA biogenesis [BR:
dpx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
DAPPUDRAFT_308561
DNA repair and recombination proteins [BR:
dpx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
DAPPUDRAFT_308561
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
SHS2_Rpb7-N
RNA_pol_Rbc25
Motif
Other DBs
NCBI-ProteinID:
EFX72094
JGI:
Dappu1_308561
UniProt:
E9H7V3
LinkDB
All DBs
Position
Unknown
AA seq
172 aa
AA seq
DB search
MFYHIALEHEILLHPRYFGPQLMETVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGIIQ
PGQGFVVYPVKYKAIVFRPFKGQVLDAVVTQVNKVGLFTEIGPLSCFISRHSIPSDMQFD
PNSTPPCYKTQDEDVVIQQDDEIRIKIVGLRVDATDIFAIGTLMDDYLGLVS
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgttctatcatattgctttggaacacgaaattcttttgcatcctcgatatttcggacca
caattgatggaaactgtaaaacaaaagctttttacagaagttgaaggcacttgcactgga
aagtatggatttgttatagcggtgactactattgacaacattggtgctggtatcattcag
cccgggcaagggtttgttgtttaccctgtcaagtacaaggcaattgtctttcgaccattc
aaagggcaggttttggatgcagttgtaacacaagtcaataaggttgggcttttcacagaa
attggacctctttcatgtttcatatccagacattcgattccgtcggacatgcagttcgac
cccaattcaaccccaccttgctacaaaacccaggatgaagatgttgtcattcaacaggac
gacgaaatccgcataaaaattgtcggtttgagagtggatgccaccgatatttttgctatt
ggaacacttatggatgactacttgggtttggtcagctaa
DBGET
integrated database retrieval system
