KEGG   Daphnia pulex (common water flea): DAPPUDRAFT_308600
Entry
DAPPUDRAFT_308600 CDS       T04347                                 
Name
(GenBank) hypothetical protein
  KO
K02325  DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
Organism
dpx  Daphnia pulex (common water flea)
Pathway
dpx03030  DNA replication
dpx03410  Base excision repair
dpx03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dpx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DAPPUDRAFT_308600
   03410 Base excision repair
    DAPPUDRAFT_308600
   03420 Nucleotide excision repair
    DAPPUDRAFT_308600
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dpx03032]
    DAPPUDRAFT_308600
   03400 DNA repair and recombination proteins [BR:dpx03400]
    DAPPUDRAFT_308600
Enzymes [BR:dpx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DAPPUDRAFT_308600
DNA replication proteins [BR:dpx03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    DAPPUDRAFT_308600
DNA repair and recombination proteins [BR:dpx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      DAPPUDRAFT_308600
SSDB
Motif
Pfam: DNA_pol_E_B Dpoe2NT
Other DBs
NCBI-ProteinID: EFX72083
JGI: Dappu1_308600
UniProt: E9H864
LinkDB
Position
Unknown
AA seq 523 aa
MNSRFKNDIVMTFKLNGLTVRSEATKYIIGLLTPLHKDEQVQWLEKLIDVIQKQGLLNST
TVEKSHVERAAKECCQNEFDETTVLLNVISAFDVPKFVYNTERKKYLSFDAPHSINLFGD
PRDKSEMFRHRYAILHQRTSRHSLFTPSVLGSGSTASQNKYQLQPIEYLLGMSTKLTNLV
VLGMLTYLTEGKLHLEDMTGSVPISLKDTNFHGGLFTENCFVLGQGYFQDGVFHIEHLGM
PPPEPAKITRTYFGNTNFFGGSSTSTLKVSVKLKAIEEQNPDAMMVFLSDVWLDQTRVME
KLRILFAGYCEDPPICFVLMGNFLSGTTCNTSSSHLRQLFKSLAEMIKEFPNLVEQTRFI
FVPGPSDSGFCNILPRPPLAEVIRAEFVQRIPSGIFTTNPCRIQYGTKEIVVLREDILTK
MCRNAINFPSDDIPQQFAKTLTSQGHLCPLPGEICPVYWPYDHALYLYPLPDVVVVGDRL
GGFTAQNMDCVIFNPGPFSRNNFNFKVYIPIRSQVEDSEIGDT
NT seq 1572 nt   +upstreamnt  +downstreamnt
atgaatagtcgatttaaaaacgatatagttatgaccttcaaactgaacggcctgacagtt
agatcggaagctaccaaatatattattggtttgcttacacccttacacaaagatgagcaa
gttcaatggcttgagaagttgattgatgtgatacaaaaacaaggtctgttgaacagcaca
actgttgaaaaatctcatgttgaaagagctgctaaggagtgttgccaaaatgagtttgat
gaaacaacagttttattaaatgtaatatctgcttttgatgttcccaaatttgtctacaac
actgaaagaaagaagtacctttcttttgatgcacctcattccataaacttgtttggtgat
ccaagagataagtctgaaatgtttcgccatcgatatgccattctccatcaaaggacttct
cgtcatagtcttttcactccatctgtgttagggtcaggttcaactgcttctcaaaataaa
tatcaactgcaaccaattgaatatttgctgggaatgtcaactaaacttaccaatcttgtg
gtacttggaatgttaacttatttaacagagggcaaactgcatttagaagacatgactgga
tctgtgcctatctcattgaaagatactaatttccatggtggactctttactgaaaactgc
tttgttctgggacaaggctatttccaagatggagtatttcacattgaacatttggggatg
cctccacctgaaccagctaaaatcactagaacttattttggaaacacaaacttttttggt
ggttcaagtacatcaactttaaaagtttctgtcaaactaaaagcgatagaagaacaaaat
ccggatgctatgatggtttttctttctgatgtgtggctcgatcaaactagagttatggag
aagttacgtatacttttcgctgggtactgtgaagatccaccaatatgctttgtgttgatg
ggcaattttctatcgggcactacgtgcaacacttcttctagtcacttgcgccagttattt
aaatcgctcgctgaaatgataaaagaatttcctaatctcgttgagcaaacgcgctttatt
tttgttccggggccatctgattcaggattttgtaatatattgcccaggcctcctcttgcg
gaagtgatccgggcagaatttgtgcaaagaattccaagtggtatatttactaccaatcct
tgtcgaattcaatatggaacaaaagaaattgtagttctgcgcgaagatattttgactaaa
atgtgtcgcaatgctattaatttcccttctgatgatattccccaacagtttgcgaaaacg
ttgacatcgcagggacacttgtgtcctcttcctggggagatctgccctgtctattggcca
tacgatcatgcactgtatctgtatcccttacctgatgtggtggttgttggtgatcgtctt
ggtggtttcacagctcaaaatatggattgcgtcatttttaacccaggaccattttcccgc
aacaacttcaatttcaaagtgtacatcccaatacggtcccaagtggaagacagtgaaatc
ggtgatacttaa

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