Daphnia pulex (common water flea): DAPPUDRAFT_310603
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Entry
DAPPUDRAFT_310603 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
DAPPUDRAFT_310603
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpx03019
]
DAPPUDRAFT_310603
Enzymes [BR:
dpx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
DAPPUDRAFT_310603
Messenger RNA biogenesis [BR:
dpx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
DAPPUDRAFT_310603
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
CbiA
ATP_bind_1
TniB
AAA_10
AAA_22
MMR_HSR1
nSTAND3
AAA_16
DUF8551
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
EFX89485
JGI:
Dappu1_310603
UniProt:
E9FU50
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MSEEQRQKESEVVQEFKLEQDNELRFEVESKEKVTLELKSGLAEVFGTEIVKGKVYSFGG
GSKIAVFTWQGCLLELRGKTEAAYVARETPMIIYLNTHAGLEQIRKKADADETKRGPIAM
IVGPTDVGKSTVCKLLLNYAVRMGRRPIYVDLDVGQGQLSIPGTIGAMAIERPADVEEGF
SQVCPLIYHYGYKEPGSNVMLYNLLVTKLAQTVAERMEANRQNAVSGVIINTCGWVKGQG
YQMLIHAAKAFEVDLIIVLDQERLYNELVRDLPETVKVVFQPKSGGVVERSRQARVESRD
QKIREYFYGSAAQFYPHSFEVRFSDVKIFKIGAPALPDSLMPLGMKAEDQLTKLVTVQPS
QQLLHHLISISMAESGEDDIIQTNVTGFICVNNVDLERQMLTVLSPQPRPLPRTRLLLSD
IQYMDSH
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaggagcaacgacaaaaagagtctgaagtggtccaagaattcaaacttgaacaa
gataacgagcttcgttttgaagttgaaagcaaagaaaaagtcacattagaattgaaatct
ggactggctgaagtatttggaacagaaattgtcaaaggaaaagtgtacagttttggtggt
ggttccaagatcgctgttttcacatggcaaggttgtcttttagaactgagagggaaaaca
gaagcggcttatgtggcaagagaaactccaatgattatttatctcaatacacatgctgga
ttagaacagataaggaagaaagctgatgctgacgagactaaaagaggccctatagccatg
attgttggtccaacagatgttggaaaatcaacagtttgcaagttgcttttgaactatgca
gtgagaatgggtagaaggcctatatatgttgatttagacgttggccagggacaactttcc
attccaggcactattggtgcaatggcaattgaacgtcctgctgatgttgaagaaggattt
tcccaagtatgcccactaatataccactatggctacaaagaacctgggagtaatgttatg
ctgtacaatttacttgtcaccaaattagcacaaacagttgcagagagaatggaagcaaat
cgacagaatgctgttagtggagtaataatcaacacctgtggctgggtaaagggccaaggc
tatcaaatgcttattcacgcagccaaagcatttgaagttgatctaataatcgtccttgac
caagagcgactttacaacgaactagtgcgtgatttacctgaaaccgtgaaagttgtattt
caacccaaaagtggcggagttgtggaacggagtcggcaggcaagagtagaatctcgagat
cagaaaattcgcgaatatttctacggatcggcagcccagttttatccacattcatttgaa
gtgagattttcagatgttaaaatatttaaaattggtgcgccggccttaccggattcatta
atgcctctgggaatgaaagcagaagatcaacttacgaaattagtcactgttcagccaagc
cagcaattattgcatcatttgatttcaattagtatggctgaatccggggaagatgatatt
attcagacaaacgttactgggtttatttgtgtgaataacgtggatttagaacggcaaatg
cttacggtgttgtcacctcagcctcgaccactacctcgaacccgattgcttttatccgac
attcagtatatggactcccactga
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integrated database retrieval system
