KEGG   Daphnia pulex (common water flea): DAPPUDRAFT_311294
Entry
DAPPUDRAFT_311294 CDS       T04347                                 
Name
(GenBank) hypothetical protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
dpx  Daphnia pulex (common water flea)
Pathway
dpx03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dpx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    DAPPUDRAFT_311294
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dpx03041]
    DAPPUDRAFT_311294
   03400 DNA repair and recombination proteins [BR:dpx03400]
    DAPPUDRAFT_311294
Spliceosome [BR:dpx03041]
 Complex B
  Other components
   Prp19 complex
    DAPPUDRAFT_311294
 Complex C
   Prp19-CDC5 complex
    DAPPUDRAFT_311294
DNA repair and recombination proteins [BR:dpx03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    DAPPUDRAFT_311294
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 F_actin_bind
Other DBs
NCBI-ProteinID: EFX88435
JGI: Dappu1_311294
UniProt: E9FWG6
LinkDB
Position
Unknown
AA seq 800 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEDEKLLHLAKLMPTQWRTIAPIVGRTAAQCLERYEYLLDQAQRKEDGEEPGDDP
RKLRPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGMGVRRGALSHNRRKRGVDYNAEIPFEKQPAIGFHNTAEEQFDPFA
PNFHRLRQQQLEGELRSVKEDRERKKDKDRLKQRKENEVPSALLQGDQPAAKRSKLVLPE
PQISDRDLEQVVKLGRASEAAQDAARETGQRVSDTLLADYSLTQVNRTPRTPAPAMDKIL
QEAQNLMALTHVETPLMGGANAPLVNPDFSGATPSKEGVATPNTLLSTPFRTPGGAAGSA
TPGMLSITSGATPRTGTLPGATPLVRDKLNINPEEPTEVMQRTLKEQLKRGLSTLPAPKN
DYEIVVPEEEMDTESGTPGEGELAGTYISVEDQADIDARIEAERKKQREAELKRRSQALQ
RSLPRPHEVNNAILRPANSSDASLSDLQKAEELIKKEMLTMMHYDSIRNPVNLSTEKGGG
LSRKIIETSQNFLSNNSYQEFEDKDIDQAKELLKVEMEKVKAGMGHGDLTMEAYTQVWDE
CLSQVLFVPSQNRYTRASLASKKDRLESSSRHLETNRAHMAREAKKAAKLEKKLRTLTAG
YQSRAQALHKQTQDLIDQVEAARIELDTYSFLKKHEDAAIPSRLEKIRQDVLVQTERERE
LQKRFQLLQDKCFEASLAAP
NT seq 2403 nt   +upstreamnt  +downstreamnt
atgccacgcattatgattaaaggtggtgtgtggagaaacactgaggatgaaattttgaaa
gcagccgtgatgaaatatggcaaaaatcagtggtcacgtattgcttctctcctccatcga
aaatcagctaaacagtgcaaagctcgctggtatgagtggctggatcctagcatcaaaaag
acagaatggagccgtgaagaggatgagaaacttttgcacttggcaaagctcatgcctacc
cagtggagaacaattgctcctattgtcggcagaactgccgctcaatgtcttgaacgttat
gaataccttcttgatcaggctcaaagaaaagaagatggtgaggaacctggagatgaccca
cgtaaactacgtcctggagaaattgacccaaatcctgagactaagccagctcgcccagat
cccaaagacatggatgaagatgaattagagatgctttcagaagccagagctaggttagcc
aacactcagggtaaaaaagctaagagaaaagctagagagaagcaattggaagaagctcga
agactcgctgctttacaaaagagacgtgagttgcgagctgccggcatgggcgttcgtcgt
ggagcactctctcacaaccgccgtaagcgcggggtcgattacaatgccgaaattccattc
gaaaagcagccagctattggatttcacaacacagcagaagaacagtttgatcctttcgcg
ccgaatttccatagactccgtcaacaacaactggagggtgagctacgctcagtcaaggaa
gatagagaacgtaagaaggacaaggaccgactcaagcagcggaaagagaatgaagtgcca
tcggctttgctacaaggagatcaaccggctgcgaaacgttcaaaacttgttctgccagag
ccacagatttctgatagagatcttgagcaagtagttaaattgggcagagcttcagaagca
gcccaagatgcagctcgtgagacaggccaaagagtctctgacacacttttggccgattat
tccctaacgcaggtaaatcgaacaccacgaactccagctcccgcaatggacaagattttg
caagaagcccaaaatctgatggctcttactcatgtcgaaactccattgatgggtggagct
aacgcaccgttggtcaatcctgattttagtggagctacaccaagtaaagagggagtcgca
acgccaaatacactgctttcgacaccattccgcactccaggtggggctgcaggttctgcc
acccctggcatgttgagcatcacttcaggagctacaccacgtactggaactttacctggt
gctactccattagtacgagataaactaaatatcaatccagaggagcctacagaagtgatg
caacgaacactcaaggagcagctcaaaagaggcttaagcacacttccggctcccaagaac
gattatgaaattgttgtaccagaagaagaaatggatacggagtctggaacacccggtgaa
ggggaattggctggaacttacatctctgttgaggatcaagctgatattgacgctcgtatt
gaagctgagcgcaaaaagcaaagggaggctgaactgaaaagacggtcccaagcgttgcaa
cgaagcctaccgcgccctcacgaagttaacaatgccattttgagaccagccaattcgtcc
gacgcttcccttagtgaccttcagaaggcagaggaacttattaaaaaagaaatgcttacg
atgatgcattacgattcaattcgcaatccagtcaatctctcaacagagaaaggtggtggt
ctttcaaggaagattatcgagactagccaaaattttttaagcaataattcctaccaagaa
tttgaggacaaggatattgatcaggccaaggagttattgaaagtagaaatggagaaggta
aaagctggtatgggccatggagatttgacaatggaagcgtacactcaagtttgggacgag
tgtttatcacaagtgttatttgttccgtctcaaaaccgatacaccagggcttccttggct
tcgaaaaaagatcggttggaaagttcttctcgccatttagagacgaatcgagctcatatg
gccagggaggctaaaaaagcagcaaaattagaaaaaaagctgcgtacattgaccgctggt
taccagtctagagcccaagctttgcataagcaaactcaagatttgattgatcaagtggaa
gctgctcgaattgagttagatacttattccttcttaaagaagcacgaagacgctgccata
cccagtcgtctagagaaaatacgacaggacgttctcgtacagacagaacgcgagcgcgag
cttcagaaacggttccagcttcttcaagacaaatgcttcgaagctagcttagcagccccg
taa

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