| Entry |
|
|---|
| Name |
(GenBank) ABC protein, subfamily ABCA
|
|---|
| KO |
| K05641 | ATP-binding cassette, subfamily A (ABC1), member 1 |
|
|---|
| Organism |
dpx Daphnia pulex (common water flea)
|
|---|
| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:dpx00001]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DAPPUDRAFT_312055
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
DAPPUDRAFT_312055
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:dpx02000]
DAPPUDRAFT_312055
Transporters [BR:dpx02000]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
DAPPUDRAFT_312055
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
Unknown
|
|---|
| AA seq |
2199 aa
MGMFWVQLRQLMWKNLLIRKRSKVRVATELVWPVILFVILALVRTKGLKEYKNECFLEER
ALPSAGPLIFLQSLICTFDNNCHSSPASANRLIDDFEFDNVRGLIRDLTNISKRRITDEE
VAKGSGVAIDVTAGVAFAFKTISSGSSPKTSFPFKNVISRDAFQRLVSSKNASQTSALFE
SIIHIPPLELSKDVLRYHIENPRQVFCNTSLLKSWVTAPDESTLQTLSQVFCQSSAAEII
SVLNGTLLVNQVQRIVEENIEQPLHLEDWANLGRLLNTILSDISDLDSLSMIVKKFSSTT
LGKLAEQLWRSRNNEPGNATSTMSFLNSTASILCGKNTLIRERKPSDFPDGPESFQIGRL
SKSQSKTVTRSDLTTPCLQLFIGLQQNPLTRLILELFYPFIRGKLIYAPKNTAFDRVISH
VNETFQDLRIVQRFAGRWLEEISPALRRFLNQLDPTTIQNVTEIIKDRFPGLSNVTSFPT
NMSNQIISIKESLVKLDLVANLVNTYVECYEFDKFEGYATEEEAVERGMSLIDTGGLWAV
IVFKAQNNNFTSQDLPHNITYKLRMDSSKIDSTKRLRDFFETPLPRTNPTKYMKYFTSGY
IFLQDKIEQAIIKLQSNRSQLPGMYMQQFPSPCYTFDTFFLAIAGLFPLFMVLSFVYTCA
MIVKSIVREKERRLKETMKTMGLGNAVHWVAWFIDSMSFMLISCVLLSMILVFGGILENS
NFLIVLIFVLSFSIATICFSFLVSTFFSRANLAAACGGFFFFACFLPYNFFNLNGQDYSL
AILILASLMSDVSFGIGCFYFASHEQSGEGAQWSNIATSPKDGDAYSLLGCILMMLFDAV
LYLILTWYVETVFPGQYGIPKPWYFMFQPSYWCSNKRRNSIAGGLPSSHEAVTDLIEEES
RDLMIGVSIRDLGKTYSNGKVALRNLHINFYEDQITSFLGHNGAGKTTTISILTGLFPPS
SGTATINGLDIRYQMDDIRRQLGVCPQHNVLFDQLTVEEHLRFYANLKTGELIESRKEID
KMIEDLGLSHKKHDISEHLSGGMKRKLSIGSAFIGNSKTVILDEPTAGVDPYSRRSIWDI
LLKYKTGRTIILTTHFMDEADLLGDRIAIISQGQLKCCGSSLFLKQKLGSGYYLTVVRKD
ESERNVLVNGDGQGNADPVSRRANETDKIVNVVKQHIPNVNIVENVGSDIVFCLPEVDEA
GVLQRDKFPLLFDELDLKLEELRVDSYGVSDTTLEEIFLKVANDPSEESFEPKVEPEQDE
EVPQTEENVTSDTFSLLSSEKLTGAVLICQQFFALYVKRFCNSKRNLKGFFCEIVLPALL
IIINQLTTMQLSAISPEPSIELSPWLYGSSNVAFYANANPNEIWNNRYIKNMLNETGMGA
RCQNNNVTSFQCNSNTTGLLNPFVNPDDYVDFQCPCNMGVAFCPANLTAATLLHRYKSVS
TDDFYDVTGKDIAMWIVRTYKTYKKFRSGGFEFGLQNPFEGLNLTLFSKDVQYLMESMRF
PLPLQLNVSGEILNFENITRLSGTFDKVKVWYDHKAWASSVSYLNAINNVILRSSMPTSK
TFYSITAVNHPMNYSTKQLEDRFMKQVGISVMHAISVIFSMSFVPASFVIFLVEERKSKT
KHLQFISGVKPITFWVASYTWDMMNYLIPSALVIFIFIGFDQQAYIGPKNIAGMILLLIL
YGLSAIALMYPASLVFSVPSSAFVGLACGNLFIGVITTISSFVLQLFDDAQLKLIGSILN
EVYLIFPHYCLGRGMIDMAQVHYTTQRLELLGLDYQRNIFEWDYLGRYFLSMVLQAVVFF
SFTVLLHYQVLPESVRTQLQPLPLEDEDVARERERVEQIDDESTDELRLLRLTKVYGRGK
EPATNRLSFGLKKGECFGLLGVNGAGKSTTFKMLTGDETVTSGNAFVGGYSILSNLTEAQ
QNLGYCPQEDALLSLLTGAEHLKLFARLRGVPQKHMDKVVNESLKKLGLLPYKNRCAGTY
SGGNKRKLSTAIAFIGNPAVVFLDEPSSGMDPKARRSLWSAIIDALKGSRSILLTSHSME
ECQVLCTRLAIMVNGTLRCLGSAQHLKNRFGNGYMISARCEMEYVSDVLQSVQSAIPEAR
LRERRSRQLIWHIQPNVLSIASLFNRMEAARAATQMVDYSITQTTLDDVFLRFARLQRET
NEESDDNNEQGLEDVPLHSRTSHGLTNQDQFAVSINTAF |
|---|
| NT seq |
6600 nt +upstreamnt +downstreamnt
atgggaatgttttgggtacagttgagacagttgatgtggaaaaacttattgattagaaag
agatcaaaggtcagagttgccaccgaacttgtttggccagtcattttgttcgtaatttta
gcacttgttaggaccaaaggtttaaaggaatacaaaaatgaatgttttcttgaagaaaga
gctcttccgtctgctggccctttgatctttctgcaaagcttaatttgcacatttgacaat
aattgccacagttccccagcatcagctaatcgtctgattgatgactttgaatttgacaat
gttcgagggctaattcgggatttgacaaacatttctaagaggaggattactgatgaggaa
gttgccaaaggatctggagttgcaattgatgttacagctggtgttgcatttgcctttaag
acaattagcagcggatctagcccgaaaacttcatttccctttaagaatgtcattagtcgc
gatgcttttcagcgactcgtaagctcaaaaaatgcctcgcaaacatcagcattatttgag
tctatcattcacattccaccgctggaactatcaaaggatgtgctgagatatcacatagaa
aacccccgtcaagtgttttgtaacacttcgcttttgaaatcatgggtaaccgctccggac
gagtcgactctgcaaactctaagccaagttttttgtcagtcttctgctgctgagattatt
agcgttctcaatgggactttgctagtcaaccaagtccaacgtatcgtggaggaaaatata
gagcagccattacacctggaagactgggcaaatcttggtcgtcttctgaatacgattctt
tcagacatcagcgatttagattctctttccatgatagtcaaaaaattttccagtacaacg
cttggaaaattagctgagcagttgtggaggtcaagaaacaatgaacctggaaacgcaaca
tcgacaatgtcgtttctcaactcaactgcgagtattctgtgtggaaagaatacgttgatc
agagaaaggaaaccttccgactttccagatggaccagagtccttccaaataggaagactc
tccaaatcccagtctaaaaccgtaacacgctctgatctcacgacaccttgcctgcagctt
tttataggcttacagcagaatccattgactcgcctgattctcgaacttttttatccattt
attcgggggaagcttatttatgcgcccaagaatacggcgtttgaccgcgtgattagtcat
gtcaatgaaacattccaagatttaaggattgtgcagcgttttgcgggcagatggctggaa
gaaatttcacctgcacttaggcgttttctgaatcaactggatccaacaaccattcaaaat
gtaacagaaattatcaaggaccgtttccctggactaagtaatgtgacttcgttcccgacg
aacatgtccaatcaaatcatcagtattaaggaaagtttggtgaagctcgatcttgtcgca
aatttagtcaatacttatgtggaatgttatgaattcgacaaatttgagggatatgccact
gaagaagaagccgtcgagcgtggcatgagtttaatagacaccggtggattgtgggcagtg
attgtttttaaagctcaaaacaataacttcacatcacaggatctacctcacaacatcact
tacaaattacgtatggacagctctaaaatcgatagcacaaagagattgcgagatttcttc
gaaacaccactgccccgaacaaatccaacaaagtacatgaagtatttcacttctggctac
attttcctacaggacaaaatagaacaagctataatcaagctgcaatcgaatcgatcccaa
ctgcctggaatgtacatgcaacaattcccaagcccatgctacacgtttgacacctttttt
ttggcgattgcgggtcttttcccgctttttatggtgttatctttcgtttacacctgcgcc
atgatcgtcaagtcaattgttcgcgaaaaggagcggcgcctcaaagaaacgatgaaaact
atgggactaggaaacgctgttcattgggtagcctggtttatcgatagcatgtcatttatg
ctaatttcctgtgttcttctctccatgatcctagtgtttggaggaattttggagaattca
aatttccttatagtattaattttcgtcctcagtttcagcattgccaccatttgcttcagt
tttctagtttcgacgttctttagccgagcgaatctagctgctgcttgtggtgggttcttt
ttcttcgcttgttttctcccctacaattttttcaacttaaatggtcaagattacagcctc
gcgatcttgatacttgcgagtttgatgagtgacgtgtcttttggaatcgggtgcttttat
tttgcaagtcacgagcaaagtggagaaggtgcacaatggagcaacatagctacaagccct
aaagacggcgatgcgtattcgctattgggatgtattttgatgatgctatttgacgctgtt
ctctacttaatattgacttggtacgtcgagaccgtctttccaggtcaatatggtattcca
aaaccatggtatttcatgtttcaaccatcctactggtgttcaaataagcgcagaaacagt
attgccgggggccttccatctagtcatgaagcagtcacggatttaattgaagaagagtca
agagacttgatgattggagtgagcatccgcgatcttgggaaaacatattctaacggaaaa
gttgctctccgaaatctccacatcaatttttatgaagatcaaattacttcctttttggga
cacaatggagctgggaaaaccacaaccatctctattctgaccggactgtttcccccgtca
agtggaacagccaccatcaacgggctggatattcgttaccaaatggatgatatccgccgt
cagcttggcgtgtgtcctcagcacaatgtcctcttcgatcaactaactgtggaagaacat
ttgcgcttctatgcaaatctaaaaacaggggaactaatcgaatcacgaaaagaaattgac
aaaatgattgaagatttagggctgtcgcataaaaagcacgatatttccgaacacctttcc
ggcggaatgaaaaggaaactatcaatcggctcagcttttataggaaattcaaaaacggtg
atcttggacgaaccaacagcgggagtcgatccttactctcgacgatcaatttgggacatt
ctccttaaatataaaacaggtcgaactattattttgactactcactttatggatgaagcg
gacttgttgggagatcgtatagctattatttcccaagggcaattgaaatgttgtggctct
tccctttttctaaagcagaaactaggatccggctattatcttacggtcgtaaggaaagac
gagagtgagcgcaatgtcctagtgaacggcgacggccaaggaaatgcagatcctgtttca
cgaagagcaaatgaaaccgataaaattgtgaatgtagtgaaacaacacatcccaaacgta
aatattgtagagaatgtagggtcggacatcgtattctgccttcctgaagtcgatgaagca
ggagtcctccagcgagacaagtttccccttctttttgatgagctcgacttaaaactggaa
gagcttcgtgttgatagctatggtgtttcggatacgacgctcgaagagatatttctaaag
gttgccaatgacccctcagaagaaagttttgaacccaaagtagaaccggaacaagacgag
gaagtgcctcaaactgaagagaacgttacttctgatacattcagtcttctctcttctgag
aaattgacgggtgcggtactgatttgtcagcaatttttcgcgttgtacgtcaaaagattc
tgcaactctaaacggaacttgaaaggatttttttgcgagattgttttgcctgcgttatta
attattattaatcaattaacaaccatgcaactaagtgcaatttctccggagccttctatt
gaactttccccgtggctttacggaagttcaaacgttgctttctacgcaaatgccaatccc
aatgaaatttggaataaccgttacataaagaacatgttgaatgaaaccggtatgggtgca
agatgtcaaaacaacaatgtgacgagttttcagtgtaatagtaacacaaccggactactt
aatccctttgtcaatcctgacgattacgttgactttcaatgtccgtgtaacatgggtgtt
gctttttgccccgcaaatttaaccgcggcgactctgcttcacagatacaaatctgtttcc
actgacgatttttatgatgtaacgggaaaggacatagccatgtggatagttcgaacctac
aagacatataaaaagttcaggagtggagggtttgaattcggcttgcaaaaccctttcgaa
ggtttaaacttgacattattttcgaaagatgtgcaataccttatggagtcaatgagattt
ccattaccacttcagttgaacgtttctggtgaaattttgaattttgaaaatattactcgt
ttaagtgggacttttgataaagtgaaggtttggtatgatcacaaagcttgggcttcgtca
gtctcctatttgaatgccatcaacaacgttattttacgttcatcaatgccaacatcaaaa
acattttatagcattacagcagttaatcatcctatgaactattcaactaagcaactagaa
gatcgattcatgaaacaagttggtatcagcgtaatgcacgcaatatcagtcattttttct
atgagttttgtacccgcatcgtttgtcatcttcttggtggaagaacggaagtctaaaacc
aagcatctacagtttatatctggagtgaaacccataactttctgggttgcgtcttacact
tgggatatgatgaattatttgatacctagcgcattagttatcttcatattcattggattc
gatcaacaagcttacattggccctaagaatatcgcaggaatgattctgttattgatcctc
tacggattatcagctatcgctctcatgtatccggctagtttggttttttccgtccctagt
tctgcctttgtcggtttggcgtgtggtaatttattcatcggagtcatcaccacgatttcc
tctttcgttcttcaacttttcgacgacgcacaattgaaattgattggaagtattcttaac
gaagtttatttaatatttcctcactactgcctcggtcgtggaatgattgacatggcgcaa
gtacattacactacccaaagacttgagctccttggacttgattaccagcgaaatatcttc
gagtgggattaccttggccgctattttctttccatggttcttcaggctgtagttttcttc
agtttcactgtgctcttgcattatcaagtgctcccggaaagtgtcagaacacaacttcaa
ccactacctcttgaagatgaagatgttgctcgtgaacgtgagcgcgttgagcagatcgat
gatgagtcaactgatgaacttcgcttactacgacttacaaaagtatacggccgaggtaaa
gagccagccacgaataggttgtctttcggcttgaagaagggcgagtgtttcggcttactt
ggagtcaatggtgctggcaaatctacaaccttcaaaatgttgacaggagacgagacggtt
actagcggtaatgcgtttgttggcggctatagcattttgtcgaacttgacagaagcgcaa
caaaatttaggatattgcccgcaagaagatgcgctcttgtcactccttactggcgcagaa
cacttgaagctgtttgcaaggctccgcggagttccccaaaagcatatggacaaggtcgtc
aatgaaagcttaaagaaattgggacttcttccttataaaaatcgatgtgctgggacctac
tccgggggcaacaaaaggaaactgtcaacagctattgcctttattggcaatcccgccgtt
gtattcttggatgaaccatcgagtggcatggatccgaaagcgcgtcgttcattgtggtca
gctattatcgacgcgctgaaaggttcacgttccatcctgttgacttcccactcgatggaa
gagtgtcaagttctttgcacccgtttagccatcatggttaacggtactcttcgctgtctt
ggttctgctcaacacctgaaaaacagatttggcaatggatacatgatcagtgctcgctgt
gaaatggagtatgtcagcgatgtcctacaaagtgtccaatcggccatacctgaagcacgt
ttgcgtgaacgacgatcccgtcagctgatttggcacattcaacccaacgttctttccata
gcatctttattcaacagaatggaagcggcaagggcagcaactcaaatggtggattattct
atcacacaaaccacgttggatgatgtattccttcgatttgcccgtcttcagagggaaact
aatgaggagtctgacgataataatgagcaagggttagaagatgtgcctttgcattctcgg
actagtcatggcctaactaatcaagatcagttcgccgtttcaatcaacactgcgttctga |
|---|
