Daphnia pulex (common water flea): DAPPUDRAFT_312346
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Entry
DAPPUDRAFT_312346 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K10891
fanconi anemia group D2 protein
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
DAPPUDRAFT_312346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpx03400
]
DAPPUDRAFT_312346
DNA repair and recombination proteins [BR:
dpx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
DAPPUDRAFT_312346
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FancD2
FANCI_S2
GIT1_C
Med16_N
Motif
Other DBs
NCBI-ProteinID:
EFX86914
JGI:
Dappu1_312346
UniProt:
E9G0J4
LinkDB
All DBs
Position
Unknown
AA seq
1473 aa
AA seq
DB search
MNRSNVARKRVTMMLHSDDEDDDTLASLPPPKTKKRKENNIEDVATGPGDFINALTEAGF
HPRTGNLPNLLSVQPFEFQQNLREHLVASVHYPRNVKFFVNECETFFNERNNFIKALHLT
ENSLGQETSNAISLPQDSLVRMLLQMDEIQPKLMTAILKRFTKATQEERPSATEVNLPSL
ILSQIAWLNRIVEPVHVVDTLLDLLNTSSSTIKKEIISCLPSVVGDKENIRVAFVLCGML
DETNNSLTAAILDVLGDLSLPVSEASEIRLKVVKRLPTVPLETVPILLSFVFKRIQADEA
LSIIQEVGLHFDKTFKKRHERISKETVTDCISLSMESLQISMIGSKSLSDTWIKEIQSKT
DARQLFSVDLLVLVILHKITGRRLEVELLIRKKIRMETLTTELVKETFKLYDCVLKNYFE
QLCAIADNLILSADTIVAQYGSMLFQEMFIHFDEFYQQEVVQALIQYVSCSGDRASSNDS
PAKAALIVLQELAETSWEHLVRFSAFIVSLLEYIEYMALPQVKRVMELLAKMAYGFSMND
EAKTRLASFSAAIQSELLMIIKKQLAGKQVEYQRMGVLGSVALIHVLANPELVGEISGDG
QASQSTSSLTINDSGRNGVLQSDQRLSQAKAIINIVNASTKHVPEVTALFMDEMASTSLM
YDIHPSLHSYLYEDVFDKFQEHFVVNEKEQKIDIFHIPLSLLYGLDTVEEGSPEDELVFL
NIAPIAIKEQIRRDKRDRESANEPSLTTLMSHFRLLRNTIDSYEEVSLEDIDALVGCAVC
LPVDEVMDHFNTMPQSDKDVVCRCYFYGINWFIEVINTFARSKHMRAKVIHRLQDVVELK
GKFYRALAQNTSFMPPQSVFMGEPIRALKEKGKGKAGTKKKAAAGKKGGGKGKGLKKANV
NNNTTLTTPNKSVLHSTPRASGCQVSKLDFIGSQPAKVGQPEVVSTYPIHFRELDLCAFV
LLSSALELTAEESPVALKPTDLEWLLVDLAAKLEHKLLTSAPKRRFPMKQDNSENESFLM
LDLYKPMEVAKRSVSLIRRLTLHVEAISGYFQQLIEMSDGMLDGPEMYSELAQKLGNSYT
LIFRILNRILSWHEFQKSTGATLLEDALRSIAIRVLDTAKTADMDQLHASSFDYVEKFST
SITSFACAIEHVQLLVTLYNLRPDPELSERLATVAEGYLKRSWNDRDGESHKGQKFNRDI
ESLLQIYLLHVPNIFAKLEDIISNAMAEVLASDEKEGSSESESFRTCNKATFSFYFRASF
IALVENVKKIPSPAATPRSVKATFKTWEKVVSLLNQLVETVKTNDKRSILISCLKYGRSV
IEVFYKSAMPLLDKEFKNIKEESQELLKNLQKSTRTLQNVCNHAKISSDQTLAANIPAMT
RIREALFYRVKHMLAAHGCAEAFWIGQLKNKNLKGQEILSQRSVEESDDGRQSESESSSE
VEDTDEEEDDNVTVMRENVPEAGTDSDSRSREY
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgaagtaatgtggcaagaaaaagggttacgatgatgttacattctgatgatgaa
gacgatgatacattagcatcattacctccacccaaaactaaaaagagaaaggaaaataac
atagaagatgttgctacaggacctggtgattttattaatgcattaaccgaagctggtttt
catccaaggactggaaacttaccaaatttactgagtgtccagccatttgagttccaacag
aatttgcgagaacacctcgtggctagtgttcactatccaaggaatgtgaaattttttgta
aatgaatgtgaaacttttttcaacgaaaggaacaacttcataaaggcattgcatttgaca
gagaattcattgggacaagagactagcaatgccatatctttacctcaggattctcttgta
cgaatgctactgcaaatggatgaaattcagccaaaattaatgactgccatattgaaaaga
tttactaaagcaactcaagaagaaagaccatcagctactgaagtcaatcttccttcattg
attctttcacaaattgcctggttaaatcggattgtggaaccggtacatgtcgttgacacg
ttgttggatcttctgaacacatcctcctcgacaataaaaaaagaaatcatatcatgttta
ccaagtgtggtaggagacaaggagaatattcgagtcgcatttgttctttgtgggatgctg
gacgaaacaaacaactcactgacggcagccattctagatgtcctcggtgatttgagcctc
cccgttagtgaagctagcgaaattcgacttaaagtcgtcaagagattgccaactgttccg
ctcgaaactgttccgatccttctttcatttgtgttcaaacgaatacaagcggatgaagcg
ctcagcatcattcaagaagttggactgcattttgacaaaaccttcaaaaagcgccatgaa
cgaatttccaaagagactgtcaccgattgtatttccttatcgatggaatcgcttcaaatc
tctatgattggttcaaaatcattgtctgatacttggataaaggaaattcaatcgaaaacg
gatgccagacaactattttccgtggatcttcttgtgttagtgattctgcacaaaataacc
ggacgacgactcgaagttgagctgttgattcgaaagaaaattcgaatggagacgctaaca
acagaactagtgaaggaaacattcaagctttacgattgcgtcctaaagaactactttgaa
caactgtgcgcaattgctgataatttgatcctgagtgctgacacaatagtggcccaatat
ggatcaatgttgtttcaggaaatgtttatccatttcgacgagttttatcagcaagaagtg
gtacaagcgctgattcaatacgtcagttgctcaggcgatcgagcgtcatccaatgacagc
cctgctaaagctgctttaatagttttgcaagaattggctgaaacaagttgggaacatttg
gttcgcttctcagcctttattgtttctctccttgagtatattgagtatatggcgctccct
caggtgaaacgggttatggaactcttagccaaaatggcttatggattttcaatgaatgat
gaagcgaaaactaggttagcctcattcagcgccgccatccaaagcgaacttttaatgatt
atcaagaagcagctagcggggaaacaagtagaatatcaaagaatgggagtcctgggttcc
gttgcccttattcacgttttggcaaacccagaactcgttggcgaaattagtggagatggc
caggcgagccaatcaacgtcgtcattaaccattaatgattcaggccgcaacggtgtgctt
caaagcgatcaacgcctgtcgcaagccaaagccatcatcaacatagtgaatgcctccaca
aagcacgtccctgaagttactgctctcttcatggacgaaatggccagcacttcgttgatg
tacgacatccatccttcccttcatagctacctctatgaagacgtgttcgataagtttcag
gaacactttgtagtgaacgagaaggagcagaagatcgatatctttcacattccactgtct
ctactatatggtttagacaccgttgaggaaggttcaccggaagacgagttggtgtttttg
aacatcgctcccatagcgattaaagaacaaattcgcagggataaacgagatcgagagagc
gctaatgagccttcgcttaccacgttgatgtctcattttagacttctccgaaacaccatc
gattcttatgaggaggtaagtctggaagatattgatgctctagtgggatgtgccgtctgt
cttccggtggatgaagtaatggaccatttcaacaccatgcctcaatctgacaaggacgtc
gtttgtcgttgctacttttacggcatcaattggttcatcgaagtcatcaacacttttgcc
cgctcgaaacatatgcgtgctaaagtgatccatcgtctgcaagacgtcgtagaactcaaa
gggaaattctaccgagctctagctcaaaacacatccttcatgcctcctcaatcagtattc
atgggcgagcccattcgcgctttgaaggagaagggaaagggtaaagctggtacaaagaaa
aaggcagccgctgggaagaaaggaggaggtaaaggcaaaggactcaagaaagccaacgtg
aataacaacactactctgaccactccgaacaagtccgttttacacagcacacctcgagct
tcgggctgtcaagtttcaaaattggactttatcgggtcacaacccgccaaagtcggtcaa
ccagaggttgtttcaacatatcctattcattttcgcgagcttgacttatgcgcttttgtg
ttattatcttccgcgcttgagctaactgcagaagaatcgcccgtcgcattaaagccaaca
gatctcgaatggttattggttgatttggccgccaaattagagcacaaactcttgacttca
gctccaaagcgacgcttcccgatgaaacaagacaattccgaaaatgaatccttcctcatg
ctagatctctataaaccgatggaggtagctaagcggagcgtatcactgattaggcgacta
acactccacgtggaggccatttcgggctacttccagcaactgatcgaaatgagcgatggg
atgctagatggaccggaaatgtacagcgaacttgctcaaaaactcggcaatagctacacg
ttgatttttcgcattctgaatcggattttgtcgtggcacgagttccaaaagtcaacaggg
gcgaccttactagaagatgctctaagatccatagccattcgcgtacttgataccgccaaa
actgccgatatggatcagcttcatgcttcttcctttgattatgttgagaaattttccact
tcgattacttcgtttgcctgcgccattgaacacgttcaattgttggtcaccctttacaac
ctccgccctgatccggaactttctgaacgattggcgacggtggcagaaggttatctgaag
cgtagctggaatgatagggatggagaatcgcacaaaggacaaaagttcaaccgagacatt
gagtctttacttcagatttacttacttcatgtccctaatattttcgcgaaactggaagac
atcattagcaatgctatggcagaggtactcgcatcagatgaaaaggaaggtagctctgaa
tcggaatctttccgtacttgcaacaaagctacattcagtttctacttccgggcttccttc
atcgctttggttgagaatgtcaagaaaatcccgagtcctgctgcaactccaagatcagta
aaggcaacgtttaagacatgggagaaagtagtgagtctcctgaaccaattggtcgaaaca
gtcaaaactaacgacaaacgaagcattcttatttcttgcctaaagtacggccgttctgta
attgaggtattttacaagtctgccatgcccttgctcgacaaagagttcaaaaacatcaag
gaggaatcgcaagaattgctgaaaaatttacagaagagtacgcggacgctacaaaacgtg
tgcaatcatgccaagatatcgagtgatcaaactctagctgccaacattccagccatgact
agaattcgagaagcacttttctacagggttaaacacatgttggccgcccatggatgcgcc
gaggctttctggattggacaactgaagaacaaaaatcttaaaggtcaggagatcctcagc
caacggagtgtagaagaatccgatgatgggcgacaatcagagagcgagtcgtcttcagaa
gtagaggatactgacgaagaagaagacgataatgtaaccgttatgagagagaacgttccg
gaagctggtactgattcggattctcgcagtcgcgaatactaa
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