Daphnia pulex (common water flea): DAPPUDRAFT_313169 Help Entry DAPPUDRAFT_313169 CDS       T04347                                  Name (GenBank) hypothetical protein   KO K12867   pre-mRNA-splicing factor SYF1 Organism dpx  Daphnia pulex (common water flea) Pathway dpx03040   Spliceosome Brite KEGG Orthology (KO) [BR:dpx00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     DAPPUDRAFT_313169  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:dpx03019]     DAPPUDRAFT_313169    03041 Spliceosome [BR:dpx03041]     DAPPUDRAFT_313169 Messenger RNA biogenesis [BR:dpx03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      DAPPUDRAFT_313169 Spliceosome [BR:dpx03041]  Complex B   Other components    Prp19-related factors     DAPPUDRAFT_313169  Complex C     DAPPUDRAFT_313169 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_C HAT_PRP39_N TPR_14 Suf TPR_8 TPR_2 TPR_15 Mad3_BUB1_I TPR_12 ARM_TT21 TPR_10 PPR TRPM_tetra ARM_TT21_C DHR-2_Lobe_A Motif Other DBs NCBI-ProteinID:  EFX86142 JGI:  Dappu1_313169 UniProt:  E9G324 LinkDB All DBs Position Unknown AA seq 855 aa AA seqDB search MDKSIGKKTGDIVLCEEDLAYEEEILRNPYSVKHWLRYCEFKKDAPPVIVNLIYERALKE MPGSYKLWYSYLCLRRKQTKGRCITDPLYEDANNTFERALVFMHKMPRIWMDYCKFLTLQ QKITTTRKVFDRALRALPITQHSRIWPLYLKFVKMHPIPETAVRVFRRFLKLSTEDAEEF VDYLKSIDRLDEAAVKLAQIVNKDSFVSKTGKSNHQLWNELCELNSKNPKQIKSLNVDAI IRGGLRRYTDQLGQLWNSLADYYIRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFE ELNLNHMMEEIGQKTNPTEDDDIEVELRMARFEDLMDRRPLLLNSVLLRQNPHNVAEWHK RVQLYEGKPHEVINTFTEAVQTVDPKQAIGKVHTLWVDFAKFYEKNDQIDDSRIVFEKAT HVKYVKVDELATVWCEWAEMEIRNSHFQEALKLMHRVTTPPARKINYHDDAEQVQTRVHK SLKIWGLYADLEESFGTFKTCKAVYDRILELKIATPQIIMNYAIFLEENNYFEEAFKAYE RGVALFKWPNVYDIWNTYLSKFLKRYGGSKLERARDLFEQCLEGCPNKFAKTFFMLYAKL EEEHGLARHAMNVYERATKAVPANERFDMYNMYIKKASEIYGVTKTRHIYERSIEELPDH QAREMCLRFADLERKLGEIDRARAVYGHCSQMCDPRVAPEFWKVWKEFEIRHGNEDTMRE MLRIKRSVQATYNTQINMMSAQMLAAATNTAEAAAASQDSMKMLDAEAEESRPPVPVAKP LARAGSNIMFVRSETQPGSATEDIPAAAANPDEIDIDQDGDGDEEEEEATIEEQQVPRQV FGSLKKDEEDEEEAQ NT seq 2568 nt NT seq  +upstreamnt  +downstreamnt atggataaaagtatagggaagaaaactggagacattgttttgtgtgaagaagatttagcg tatgaagaggagattctacgaaacccttactctgtcaaacattggcttcgctattgcgag ttcaaaaaggatgcccctcctgttattgtcaatttgatttatgagagagctttgaaggaa atgcctggcagttacaaactatggtacagttatctctgcctaagaaggaagcaaactaaa ggtcgctgtataacagatccactgtatgaagacgccaacaatacttttgagagagcattg gtattcatgcacaagatgccaaggatttggatggactattgcaagtttctgactcttcaa cagaagattaccactacgagaaaggtctttgaccgtgctctaagagccttgccaatcacc cagcattccagaatttggcccctctacttgaagtttgttaagatgcatccaataccagaa acagctgttcgggttttccgtcgttttcttaaactatcgaccgaagatgcagaggaattt gtcgattacttaaaatctattgacagacttgatgaggcagctgttaaacttgcccagata gtgaacaaggacagctttgtttcaaagacaggaaaatcaaaccaccaactttggaatgaa ctatgcgaacttaattcgaaaaatcccaagcaaattaaaagtcttaacgtggatgcaatc attcgaggaggtcttcgacggtacactgatcaacttggccagctttggaattcccttgcc gattactatattagaagtggtttgtttgaaagagcaagagatatttacgaagaagccatt cagacagttactacagtacgagacttcacacaggtgtttgatgcctacgcccagtttgaa gagttgaatttgaatcacatgatggaagagattggtcagaaaactaatcctacagaagac gatgatattgaagttgagttgaggatggcccgatttgaggatttaatggatcgccggccc ttactgttgaattctgttcttttacgtcaaaatccccataatgttgccgagtggcataaa cgagtccagctttatgagggcaaacctcatgaagttatcaatacttttactgaggctgtc cagacagtcgatccaaagcaggccattggaaaggtgcacacgctatgggtcgactttgcc aaattttatgagaaaaatgatcagattgacgattcacggatagttttcgaaaaagctacg catgtgaaatacgtgaaagttgatgaactggcgacggtttggtgcgagtgggccgagatg gagatccgaaattctcatttccaagaagctctcaagttaatgcaccgtgttactactcct cctgcacgcaaaattaattaccatgatgacgccgaacaagtgcaaacgcgtgttcacaag tcgctgaagatttggggtttgtacgctgatcttgaagaaagctttggtactttcaaaaca tgcaaggccgtgtatgaccgtatcctcgagttgaaaattgcaacaccgcaaatcattatg aactatgccatctttttggaagaaaataactactttgaagaagcttttaaagcttacgaa cgtggcgttgctcttttcaaatggcccaacgtttacgacatctggaacacctatctctca aagtttttgaaacgctacggcggctcaaaattagaacgagctcgagatctctttgaacag tgtcttgagggatgtccgaataagtttgccaagactttctttatgctctacgctaaactc gaagaggaacacggcttagcccgtcacgctatgaacgtttacgagagagccaccaaagct gtgccagcaaatgagcgctttgacatgtacaatatgtacataaagaaggcatccgagatt tatggtgtgaccaagactcgccacatctacgaacgatccatcgaagagctacctgatcac caggctagggaaatgtgtttgcgatttgccgatttggagcgcaaattgggagaaattgac agagcccgtgctgtgtacggacattgcagccaaatgtgcgaccccagagttgcgcctgaa ttttggaaggtttggaaagagtttgaaattcgccatggcaacgaagatacgatgcgggaa atgcttcgaatcaaacgcagcgtgcaggcaacatataatacacagatcaatatgatgtca gctcaaatgttagctgctgcgaccaacactgccgaagcggcggctgcttctcaggatagc atgaaaatgctagatgccgaagctgaagaatctcgccctccagtgcctgttgccaagcct ctggcgcgagctgggagcaacatcatgttcgtccggagcgaaactcagcccggttccgca accgaggacatccctgctgctgctgctaacccagacgaaatcgacattgatcaagatgga gacggtgacgaggaagaagaggaagctaccattgaagaacagcaagttccacgtcaagtc tttggtagcttgaaaaaggatgaagaagatgaagaagaagcccaataa

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