Daphnia pulex (common water flea): DAPPUDRAFT_314091
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Entry
DAPPUDRAFT_314091 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DAPPUDRAFT_314091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpx03009
]
DAPPUDRAFT_314091
Ribosome biogenesis [BR:
dpx03009
]
Eukaryotic type
Pre-60S particles
RNases
DAPPUDRAFT_314091
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
REX3_middle
CHORD
RNase_T
Motif
Other DBs
NCBI-ProteinID:
EFX85526
JGI:
Dappu1_314091
UniProt:
E9G4N6
LinkDB
All DBs
Position
Unknown
AA seq
1042 aa
AA seq
DB search
MLPSVGYFKSIVCPYFENESCERPHCQFRHEHLPVRAPKPTVVLRTHDPGPSQGIQEGEN
SSSIEQIVSEAVKRVLKENGQLLENFDASKIMELVGQQKLVEKVVEHLAPPVSPKKVEGN
PRESSHKSKSHKSYNIPVGTPAYTPTPIAVLKKGITTPSKVENYEPTKPSSGRVATYKPS
SKVAAKSEETYTPSTLESTSVPSRVDNYVPRNSSTSSTATYKPSKVVSIKTEEGYTPPST
LENTPDVNYTPSSRDSDNIISDRYTPPSNLNCDVDYQPTTRELSSVEPSYSPSCSTFESG
IADYSPSSISTLSTEPSYSPAPTSSSVSFEVDYTPSSLASGQQLTPEKYLELFEDAEEAS
ESESKKKHRKTKEEESSSSSPKKSKSSESKKSESKSEESKSSKHDVEMESDSDVDEECYR
IFKEYKPSATSSSNGQADDHKKRKSEDVPPVSEVIIPVKKQRVAHTHVDAPVRPSSLVRA
KPARLTPGMMMIDRFKSFQEAKAASGEQSWPQLSSTSQRIAAPRPSPSSSSGGAEKKRIA
HVPNVMGMLTSRPKAAAPATVTPGLPAGSGLPTIQQQPTTLQRAALSGNNAFRRPVPNKA
AGPPVPAVKAPPPKLPRPMIAIELGCRVPANIRQKYLNILVDETLKIYDREEDAYERAVE
EERQSYAKCSSRIVYANVITNVVQRIRREAESNSNPSSTIQNDKKMMSHSAVLAGKGGAT
VSWSIEKPKSSKIDSSLLKGATLYKLMERHLLTLEQQDFNGFPRPDPNERGRALVNPINK
FRTKPSVHLAPDERNCDRCSKVYKVNSRGLAVKQDDTCSYHWGKPFARRGETRYTCCKGE
ANSDGCSVGKWHVSDTGSLINLKGFVRTMSKTPPPDGNYGVYALDCEMCYTTEGPELTRV
TVISSDCKTVYETLVMPDNPILDHNTRFSGITEEDLLNVKTTIRDVQAVLLSKFSDKTIL
IGHSFDSDLRALRMIHDTVVDTSVVFPHSRGPPYKKALRTLCGDILQKIIQNDVGGHDSA
EDAIACMELMMWKIKQDLKQLK
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgcttccgtcagttggatacttcaaaagtatcgtctgtccttatttcgaaaatgagtcg
tgtgagaggccacattgtcaattccgacacgaacacttgcccgttcgagcacctaaacca
actgtggtcctcagaactcatgatcctggcccatctcaaggcattcaagaaggagaaaat
tcttcgtcaatcgagcagatagtgtctgaagctgtcaaacgggtcctaaaggaaaatgga
cagctcttggagaattttgatgcctccaaaattatggaacttgttggccagcaaaagctg
gttgagaaggttgtggaacatcttgcccctcctgtcagtcccaagaaagttgaaggaaat
cctagagaatctagccataaaagcaaaagtcacaaatcctacaacatacctgtcggaacc
cccgcctatactcctacgcccattgctgttctcaagaaaggcataacaaccccttcgaaa
gtggaaaattatgaacccacaaaaccttcttctggacgggtagccacttacaaacccagc
agtaaggttgctgccaaatcagaagagacctatacaccatccactttggaaagcacttca
gtcccgtctagagtagataattatgtgcctagaaactcatccactagttcaactgccacc
tataagcctagcaaagtcgtctcaattaaaacagaagaaggttacactcctccctccacg
ttagaaaacactcccgacgtcaactacacaccgagtagtagggattcagataacatcatc
agtgatcgctacacccctccgtccaatttgaactgcgacgtcgactaccagccaaccact
cgagaattgagctctgttgaaccgtcgtattctcccagttgttcaacattcgaatctgga
atcgccgattactcgcccagctccatctcgactctatccaccgagccgagttacagtcca
gcaccgaccagtagcagcgtttcgttcgaagttgactacacgcccagctctttggccagc
ggccagcagctgacacctgaaaaatacctcgaacttttcgaagatgcggaagaggccagc
gagtccgagtcgaagaagaaacacagaaagaccaaagaggaggaaagttccagttccagt
cccaagaagagcaaatcttcagaatctaaaaaatccgagtctaaatctgaagaatctaag
tcatctaaacacgatgtggaaatggagtcggactctgacgtggacgaagagtgctaccga
atattcaaggaatacaaaccaagtgcaactagcagcagcaatggacaagccgacgatcac
aagaagcggaaatcggaagatgtgcctcccgtttcagaggtgattattcccgtgaagaag
cagcgggtagctcatactcatgtcgacgctccagtccgaccgtccagccttgttcgtgcc
aaacctgcacgccttactccgggcatgatgatgattgaccgtttcaagagcttccaagag
gccaaagcggcgagcggagagcaatcttggccacagctttcgtccacttcacaacggatc
gctgctccacgtccatcgccttcgtcgtcatccggtggagcagagaagaagcgcatcgcc
catgttcctaacgtgatgggtatgcttacctccagacccaaagctgctgctccggcaact
gttacgcctggtcttccggctggttcgggattgccgactatccagcaacaaccaacgacg
ctgcagagagccgccttatctggaaacaacgctttccggcgacctgttccaaacaaagca
gctgggccacccgttccggcagtgaaagctccgccgcccaaacttccacgtcccatgata
gctattgaactgggctgtcgggtgccggccaatattcgacaaaagtatctcaacatcctg
gtggacgaaacgctcaaaatttacgaccgggaagaagatgcttatgaaagagccgtcgaa
gaagaaaggcagtcctatgccaagtgtagcagtaggatcgtgtacgccaacgtcatcacc
aacgtagtccagcgcatccggcgagaagctgaaagtaacagcaatccgagttccactatt
caaaatgacaagaaaatgatgtcccactcggctgtattggccggcaaaggaggagccacc
gtatcttggagtattgaaaagccaaaatcaagcaagatcgattccagtctcttgaaagga
gcaaccctgtacaaactgatggaacgacacctcctcactctggagcaacaggatttcaat
gggttcccacgaccggatcctaatgaaagaggtcgagcccttgtcaatcccatcaacaaa
ttccgcacaaagccgagtgtccacctagcacctgacgagcgcaattgcgatcgatgtagt
aaagtttacaaagtcaacagtagaggcctggccgtcaaacaggacgacacctgttcctac
cattggggcaaacctttcgcccgtcgcggtgagactcgttatacctgctgcaaaggggag
gccaattctgacggttgttccgtgggaaaatggcacgtaagtgataccggaagtctgatc
aacctcaagggatttgtgaggacgatgtccaaaacgccgccacccgacggcaactacggc
gtctacgcgctggattgcgagatgtgctacacgacggaagggcccgaactcacgcgagtt
accgttatctcgtctgattgcaaaacggtttacgagacgctcgtcatgccggacaatccc
attctcgatcacaacacgcgattcagtggcatcaccgaggaggatttgctcaacgtcaag
acgaccatccgagacgtccaggccgttctgctcagcaagttttccgacaagaccatcctg
atcggacacagtttcgacagtgatttacgagccttgcggatgatacacgacacagtcgtc
gacactagcgtcgtgtttccgcattccagaggcccaccttacaaaaaagctttacggaca
ttgtgcggcgacattttgcaaaagatcatccagaacgatgttggaggtcacgacagtgca
gaggacgctattgcgtgcatggaactaatgatgtggaaaatcaagcaagatttaaagcaa
ctcaagtaa
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