Daphnia pulex (common water flea): DAPPUDRAFT_314241
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Entry
DAPPUDRAFT_314241 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K13175
THO complex subunit 6
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
DAPPUDRAFT_314241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpx03019
]
DAPPUDRAFT_314241
03041 Spliceosome [BR:
dpx03041
]
DAPPUDRAFT_314241
Messenger RNA biogenesis [BR:
dpx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
DAPPUDRAFT_314241
Spliceosome [BR:
dpx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
DAPPUDRAFT_314241
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
WD40_Prp19
WD40
NBCH_WD40
Beta-prop_Vps41
Beta-prop_EML_2
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
PEP5_VPS11_N
Motif
Other DBs
NCBI-ProteinID:
EFX85454
JGI:
Dappu1_314241
UniProt:
E9G522
LinkDB
All DBs
Position
Unknown
AA seq
331 aa
AA seq
DB search
MPDIKSFYVTVLSQALSPCEEFLAAGTNFGNVNIFNIKSLYAEDEQGPRESLTLPQKCFS
VSTKPLQAITSLNDNLLVGGKNCIEAFSWNQLVLPQNSDEKVKPCWKVDLRLPTDFGTKE
TVDCMINGENSTFVACGDNNVHHVDLEYGKVKQTFSGHTDFIHSMSLVGNQLSSASEDGT
VCIWDTRKSKPNHVITPHLESKLNRPHLGKWVGAVAMNEDWLVCGGGPHLGLYHLRSLTM
SRVLLEEDVHGVNNVMFHEDNIIVGVDGPFVYHCLFSGDITVKMPTSPLRVYSICLQKKD
TNKLLFVGGSGGDIDICTSSKLQDQVIRCLS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacatcaaatcgttttacgtgactgtcctctctcaagccctctctccttgtgag
gaatttctagctgctggaaccaattttgggaatgtcaacatatttaatatcaaaagtttg
tatgcagaggatgaacagggtccacgtgaaagcctcacattaccacagaaatgtttttct
gttagtaccaaacctttgcaagcaataacatctttaaatgataacttacttgttggaggc
aagaactgtattgaggcatttagctggaatcaattggtgcttccacagaatagtgatgag
aaggtgaaaccctgctggaaagttgatcttcgcttaccaactgactttggcacaaaagaa
actgtagattgcatgattaacggtgaaaactcaacttttgttgcttgtggagacaacaat
gttcatcatgtagatcttgaatatgggaaagttaaacaaaccttctctggtcatactgat
ttcattcattcaatgtcccttgttgggaatcagctatcaagtgcaagtgaagacggaaca
gtatgcatctgggatactcgaaaatcaaaacctaatcacgtaattacaccacatttggag
tctaaactgaatcggccccatctgggaaaatgggttggtgctgttgctatgaatgaagat
tggttggtgtgtggaggaggcccgcacttaggcctttatcatttacgatctttgacaatg
agtagagtattactcgaagaagacgtccatggtgtaaacaacgttatgtttcacgaagac
aatataatcgtcggcgtagatggaccgtttgtataccactgcttattttcgggagatatt
accgtcaaaatgcctaccagtcctcttagagtctacagtatttgcctccagaaaaaggat
acaaataaattgctattcgttggaggatccggtggggacatcgacatttgcaccagttct
aaacttcaagatcaagtgattcgttgtctttcatga
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