KEGG   Daphnia pulex (common water flea): DAPPUDRAFT_314241
Entry
DAPPUDRAFT_314241 CDS       T04347                                 
Name
(GenBank) hypothetical protein
  KO
K13175  THO complex subunit 6
Organism
dpx  Daphnia pulex (common water flea)
Pathway
dpx03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:dpx00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    DAPPUDRAFT_314241
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dpx03019]
    DAPPUDRAFT_314241
   03041 Spliceosome [BR:dpx03041]
    DAPPUDRAFT_314241
Messenger RNA biogenesis [BR:dpx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     DAPPUDRAFT_314241
Spliceosome [BR:dpx03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    DAPPUDRAFT_314241
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_WDHD1_1st WDR55 WD40_Prp19 WD40 NBCH_WD40 Beta-prop_Vps41 Beta-prop_EML_2 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 PEP5_VPS11_N
Other DBs
NCBI-ProteinID: EFX85454
JGI: Dappu1_314241
UniProt: E9G522
LinkDB
Position
Unknown
AA seq 331 aa
MPDIKSFYVTVLSQALSPCEEFLAAGTNFGNVNIFNIKSLYAEDEQGPRESLTLPQKCFS
VSTKPLQAITSLNDNLLVGGKNCIEAFSWNQLVLPQNSDEKVKPCWKVDLRLPTDFGTKE
TVDCMINGENSTFVACGDNNVHHVDLEYGKVKQTFSGHTDFIHSMSLVGNQLSSASEDGT
VCIWDTRKSKPNHVITPHLESKLNRPHLGKWVGAVAMNEDWLVCGGGPHLGLYHLRSLTM
SRVLLEEDVHGVNNVMFHEDNIIVGVDGPFVYHCLFSGDITVKMPTSPLRVYSICLQKKD
TNKLLFVGGSGGDIDICTSSKLQDQVIRCLS
NT seq 996 nt   +upstreamnt  +downstreamnt
atgcctgacatcaaatcgttttacgtgactgtcctctctcaagccctctctccttgtgag
gaatttctagctgctggaaccaattttgggaatgtcaacatatttaatatcaaaagtttg
tatgcagaggatgaacagggtccacgtgaaagcctcacattaccacagaaatgtttttct
gttagtaccaaacctttgcaagcaataacatctttaaatgataacttacttgttggaggc
aagaactgtattgaggcatttagctggaatcaattggtgcttccacagaatagtgatgag
aaggtgaaaccctgctggaaagttgatcttcgcttaccaactgactttggcacaaaagaa
actgtagattgcatgattaacggtgaaaactcaacttttgttgcttgtggagacaacaat
gttcatcatgtagatcttgaatatgggaaagttaaacaaaccttctctggtcatactgat
ttcattcattcaatgtcccttgttgggaatcagctatcaagtgcaagtgaagacggaaca
gtatgcatctgggatactcgaaaatcaaaacctaatcacgtaattacaccacatttggag
tctaaactgaatcggccccatctgggaaaatgggttggtgctgttgctatgaatgaagat
tggttggtgtgtggaggaggcccgcacttaggcctttatcatttacgatctttgacaatg
agtagagtattactcgaagaagacgtccatggtgtaaacaacgttatgtttcacgaagac
aatataatcgtcggcgtagatggaccgtttgtataccactgcttattttcgggagatatt
accgtcaaaatgcctaccagtcctcttagagtctacagtatttgcctccagaaaaaggat
acaaataaattgctattcgttggaggatccggtggggacatcgacatttgcaccagttct
aaacttcaagatcaagtgattcgttgtctttcatga

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