Daphnia pulex (common water flea): DAPPUDRAFT_314512
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Entry
DAPPUDRAFT_314512 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K09273
upstream-binding transcription factor
Organism
dpx
Daphnia pulex (common water flea)
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dpx03000
]
DAPPUDRAFT_314512
03021 Transcription machinery [BR:
dpx03021
]
DAPPUDRAFT_314512
Transcription factors [BR:
dpx03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
DAPPUDRAFT_314512
Transcription machinery [BR:
dpx03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
DAPPUDRAFT_314512
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
CHDNT
Motif
Other DBs
NCBI-ProteinID:
EFX85008
JGI:
Dappu1_314512
UniProt:
E9G6E2
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MANKRKEKKSRRSNLHDAVASTSSVTEQRNRGSEKPEVPSSPIPDEHSNSPLAWPKSDDF
ELFKRIRKACPKEDAMKYDSRVNHLNWDSIKFQDYSAEQCLNRWLYVQIHLRHYRILAEV
LDDAESWVDTPWCNFNKGGKNNQKHPDQPKKPLTSYLLFYMKQKDAVLKKQPGLGMTELN
TIIAKMYHKLSDQKKTEYSELAKKEKEAYQEKMKKFMDAHPDYRLPKSKQTSKAVPPKPP
TPLRLFSDINMPKFSGEGMTMTEAREKCRDAYKELKDKQKLTWIYQALEQEPEFNEEMEK
FRMQHPDLDFPAKRFNLLTKDEIKIKNKYEGKPSKPPNSGYNLFTKELLSNNKLKDFETT
ERMGEIARLWKEDMSDEQKTSCNERAKQMNESYKIKYASYLETLTPEHRHAELLSSDGKA
FLKQMAAKKAKDGSKKLTVGTQVSSEIESDEEETEIELQIPSLMFRNSNMDNTEYSTITK
QELARLVANLSEETKVSDQEESDEESSEDSELSSSNDDQSSYECSEEDDEISSEEY
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaagagaaaagaaaaaaagtcacgaagaagcaatcttcatgatgctgttgca
tcaacttcttctgtaacggagcaaaggaacagaggttctgaaaagcctgaagtaccttcc
agtccaataccagatgaacattcaaattcacctcttgcatggcctaagagtgacgacttc
gagctttttaagcgtatccgaaaagcatgtccaaaggaagatgccatgaagtacgactcg
cgtgtgaaccacttaaattgggattccattaaatttcaagattattctgcagaacaatgt
ttaaatcgatggttatatgttcaaattcatttgagacattatcggatccttgccgaggtc
ttagatgatgctgaatcgtgggtagatacaccgtggtgtaatttcaacaaaggcggaaag
aataaccagaagcatcctgatcagcctaaaaaaccactaacttcctacttgttgttctac
atgaaacagaaagatgctgttttgaagaaacaaccagggcttggaatgacggagttgaac
acgattattgccaaaatgtatcataaactaagcgatcagaagaaaacagagtattcagaa
ctggcgaaaaaagagaaagaagcgtatcaagagaagatgaagaagtttatggatgctcac
ccagactatagattgccaaaatctaaacaaacttctaaggcagttcctcctaaaccgcct
acaccattgagactgtttagtgatataaatatgccaaaattttcgggtgaagggatgaca
atgactgaagcaagagagaaatgtagagatgcctacaaggaattgaaggataaacaaaaa
ctaacgtggatttatcaagctctggaacaagaacctgagtttaatgaagagatggaaaaa
tttagaatgcagcacccagatcttgatttcccagcaaagagatttaatctgttgacaaaa
gacgaaatcaaaatcaagaacaagtatgagggtaaaccgtctaagccacctaactctgga
tataatttatttaccaaagaactgctctccaacaataagttgaaggattttgagaccact
gaaagaatgggagaaattgcaagactctggaaagaagatatgagtgatgagcaaaaaact
tcatgcaatgaaagagcaaaacaaatgaatgagtcgtacaaaataaagtatgcatcatat
cttgaaactctgactcctgaacaccgccatgcagaactgttaagttctgatggaaaggct
tttctgaaacaaatggctgcaaaaaaggctaaagatgggagtaaaaaactgacagttggc
acgcaagttagttcagaaatagagagtgacgaggaggagactgaaattgaattgcaaatt
ccttcactgatgtttcgcaattccaatatggataacactgagtattccacgataaccaaa
caagaactcgcaagattagtggccaatctgagcgaagaaacaaaggtatcggatcaggag
gagtcggacgaagaaagttctgaagattctgaactgagcagttcaaatgacgatcaatcg
agttacgaatgctcggaggaagatgacgaaatttcatcggaagagtactaa
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