Daphnia pulex (common water flea): DAPPUDRAFT_317251
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Entry
DAPPUDRAFT_317251 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03022
Basal transcription factors
dpx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DAPPUDRAFT_317251
09124 Replication and repair
03420 Nucleotide excision repair
DAPPUDRAFT_317251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpx03021
]
DAPPUDRAFT_317251
03400 DNA repair and recombination proteins [BR:
dpx03400
]
DAPPUDRAFT_317251
Transcription machinery [BR:
dpx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
DAPPUDRAFT_317251
DNA repair and recombination proteins [BR:
dpx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
DAPPUDRAFT_317251
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
FYVE_2
C1_2
C1_1
DCAF15_WD40
Motif
Other DBs
NCBI-ProteinID:
EFX81828
JGI:
Dappu1_317251
UniProt:
E9GFE0
LinkDB
All DBs
Position
Unknown
AA seq
405 aa
AA seq
DB search
MADEEETNEYRWESGYEKTWEAIKEDDDGLLESNVAEIVARAKRKRAALKATGAIQLGMM
RHLFVVIDASECMFLQDLKPTRFLCVLKLLELFVHEFFDLNPISQLGILTTKVKRSEQVS
ALAGNQKKHIEALQQMKDTSCEGEPSLQNSLERAMNGLKNMPAHSSREVLVLFGSLTTCD
PGDIQKTIKSLKENNIRVSIIGLAAEVRICREIAKRTGGTYNVLLDDHHLKELILNQVQP
PAVAGSMEASLVKMGFPGGKPGSSDGASDSAADHAPAYCLCHIENETSCLMGNNSGYNCP
QCGSRYCELPVECKQCGLTLVSAPHLARSYHHLFPIKPFIERTEVPEMTHCFACAKPFGE
LDPNVYECENCNQIVCLDCDLFIRETLHTCPGCASDPITAQMKTN
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgaagaagaaaccaatgagtatcgctgggagtcgggatatgaaaaaacctgg
gaagctattaaagaagatgatgatggtttattggaatcaaatgtggctgaaatagtagcc
agagccaaaaggaaaagagctgccctgaaagccactggtgcgatccaacttggaatgatg
aggcatctctttgttgttatagatgcttcagaatgcatgtttttgcaggatttgaaacct
actcgctttctctgtgttttaaagttattagaattgtttgttcatgaattctttgatctt
aacccaataagtcagttaggaatattaacaaccaaagtgaagcgcagcgagcaagtttca
gcccttgctggtaaccagaaaaagcatattgaggctttacaacaaatgaaggatacttca
tgtgaaggggagccatcacttcaaaactcattagaaagggctatgaatgggctgaaaaac
atgcctgcccactctagtagagaagtgttggtgttatttggcagcttgactacttgcgat
ccgggtgacatacaaaaaacgataaagtctttgaaggagaataacattcgggtttcaatc
atcgggctggcggcagaagtaaggatttgccgagaaattgccaaacgaactggtggcact
tacaatgttcttctcgacgatcatcatctgaaggaactcattctaaatcaagtgcaacca
ccggctgtagcaggttctatggaggcctcactggtgaaaatgggttttcctggaggtaaa
cctggttcaagcgacggagcttcagattctgctgcagatcacgccccagcttattgtctt
tgccatattgaaaacgaaacatcatgtttaatgggcaataacagtggctataactgtccg
caatgtggaagtcgttattgtgagcttccagttgagtgcaaacaatgcggattgactctg
gtttctgcccctcatcttgcccgttcttatcatcatctctttcccatcaaaccatttata
gaacgaacagaagttcccgagatgacgcattgctttgcgtgcgccaagccttttggtgaa
ttggatcccaatgtttacgagtgtgaaaactgcaaccagattgtatgtcttgactgcgac
ctattcatacgagaaacattgcacacatgccctggatgtgctagtgatccaatcacagct
caaatgaaaactaactga
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