Daphnia pulex (common water flea): DAPPUDRAFT_319330
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Entry
DAPPUDRAFT_319330 CDS
T04347
Symbol
PRDM1A
Name
(GenBank) putative positive regulatory Domain/B-lymphocyte induced maturation protein 1, version A
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
dpx
Daphnia pulex (common water flea)
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dpx03000
]
DAPPUDRAFT_319330 (PRDM1A)
Transcription factors [BR:
dpx03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
DAPPUDRAFT_319330 (PRDM1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
C2CH-3rd_BIRD-IDD
zf-C2H2_6
CR_prot_dom_plant
Zf-C2H2_ZNF451_C
zf-met
Zap1_zf1
zf-C2HE
zf-C2H2_jaz
B129_C2H2-zf
Motif
Other DBs
NCBI-ProteinID:
EFX79494
JGI:
Dappu1_319330
UniProt:
E9GLD7
LinkDB
All DBs
Position
Unknown
AA seq
1189 aa
AA seq
DB search
MANQGTKMEEGGWDLAELAEEDFEQLAVYIVPDAVVEPGSGTERVNRAETSLPRNLTLKS
SQALSDVLGVWSSDYIPRGTRFGPLVGDIYAKDHVPKHANRKYFWRVYNNSEVFYYIDGY
DTAKANWMRYVNPAYSSESQNLIACQYKMNIYFYTTKPILPNQELLVWYCKEFAERLNYP
VTGDLMLQRIRQQVQQNDEDGTDTESTAEIKKPNETGPSSPAAPGSGSRAEENKVKHKKL
QHPADTTGSANKEAEQSSKEATLAVDTTTTATATTTTTTTRRDHGDNHPHHQHQMTPTAE
GSVRSDEGYHSNGYHDDALTPPEDSSDSDNDNYVLDFSRKPSSSSSSSTSSTTGPAAGQP
SSTSRLSPLAEEPPASTQQGSPQSDSRSTNEYRKVKIKMPKAYHYRHSSISEERDQVVVV
APPPRSQHHRLAPSPPQQHSPPVTQSVVKSAPLVAQLSPVAPLPLSPRFRRSHPQPPQSY
SPEPMDYDEHHHRHPNREQLEHRINYERSRSPAGREVVPPPPPPPPPPVNSLLSNGSILE
SILLRRQGNNSATVAAAVAAAAKKESGAELLRQEYYDEVYHRERFKEAVQVIVANESHPK
PDSSAGSLPPPPNATLPLPPPPPSSSSSSGHHRLSPSSSHLLLAPSTTVPVAISTVVYPP
YKKLHRYNIPTGSDVRDLLSSKDPNHLSPDSSCSTTAINKSIRNESSTSPSTGGGQQQHH
HHIHHLSGHHPSHGSHPFNSRSPQPSQSHQFHSTSSNGSNSRSAPSPHHPHNESGGSSAG
SLLYNVNNVAQMFSSAHFNMYAYGGAGSSASTGGGSGSTSTVPHPLASASSSSSAAHIHP
HLPMPHSPAASAASSSGGNGGDRCRDPSESSIRSSASSLSPNYSQALHCHTSPGSGSLSP
IGSGSPSPNGSQGRGYRSLPYPLKKKDGKMHYECNICYKTFGQLSNLKVHLRTHSGERPF
KCNVCTKSFTQLAHLQKHHLVHTGEKPHQCDICKKRFSSTSNLKTHLRLHSGQKPYACDL
CPAKFTQFVHLKLHKRLHTNERPYTCGGCQKKYISASGLRTHWKTTNCKPSSLEEEMALE
RSPTDSAGYDCNGSDVEEGMEDKDEEMSLDGMSCDSDSLAIQQHHHHQGQHEHHHELDVN
STTGRRSQSPDEGNLHGSGRQPSGNYDADSSRPSVIETANKAPQVIECT
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atggccaatcaaggaacgaaaatggaagaaggtggttgggatttagccgagttggccgag
gaggatttcgagcagttggccgtttacattgtgccggacgccgttgtggagcccggcagc
ggtacggaaagagtcaaccgagccgagacgtcgttgccaagaaatttgacactgaagtcg
agccaggccttgtctgacgtgctgggcgtctggagcagcgattacattccacgagggacc
cgattcggacctttggtcggtgacatttacgccaaggatcacgttcccaaacacgctaat
cgcaaatacttttggagggtgtacaacaacagcgaagtgttttactacatcgacggctac
gacacggccaaggccaactggatgcgctacgtcaatccggcctattcgtccgagtcgcag
aacctgatcgcctgccagtacaagatgaacatttacttttacacgaccaaaccgatcctg
cccaatcaggagcttctcgtctggtactgcaaggagtttgccgagagactcaactacccc
gtcaccggtgacttgatgctccagaggatccgccagcaagtccagcagaacgacgaggac
ggaacggacacggaatcgacggccgagatcaagaaacccaatgaaacgggaccgtcgagt
ccggcagcgcccggttccggttccagagccgaagagaataaagtcaagcacaagaaactc
caacatccggcggatacaactggatcggccaacaaagaggccgaacaatcgtccaaggaa
gccacgctggccgttgacacgacaacaacggccacggccacaacaacgacgacaacaacc
cggcgcgatcacggcgataatcatccgcaccaccaacaccagatgacacccaccgccgaa
ggttccgtccgctcggatgaaggttaccatagcaacggctaccacgacgacgctctgact
ccgccggaagattccagcgactctgacaacgacaactacgtcctggatttcagccggaag
ccttcgtcgtcttcgtcgtcttccacttcgtcgaccacgggtccggctgccggccagccc
agttcaaccagtcgtctgagtccgttggcggaagagcctccggcgtcgacccagcaggga
tcgccgcagtcggacagccggagcaccaacgagtaccgtaaagtcaaaatcaaaatgccc
aaggcctaccactaccggcacagcagcatcagcgaggagcgcgatcaagtggttgttgtt
gctcctcctccgcgctcccagcaccaccgactggccccgtcacctccgcaacagcattcg
cctccggtgacccagtcggtggtcaaatcggcgcctttggtggcccaactctcaccggtc
gcccctctgccgctcagccctcgcttccggcgtagtcatccgcagccaccgcagtcttat
tcgccggaaccgatggattacgacgagcaccatcatcgccatcccaaccgggagcaactg
gagcaccggatcaactacgagcgatcgcgatcgcccgccggacgggaagtcgttcctcct
ccgccgcctccacctccgccgcccgtcaactcgttgctgagcaacggaagcatcttggag
agcatcctgctgagacgccagggcaacaacagcgccaccgtggcggccgctgtggccgct
gcggccaaaaaggaaagcggagcggagctgttgcgccaggagtactacgacgaggtgtac
caccgggagcgattcaaggaggccgtccaagtcatcgtggccaacgaatctcaccccaaa
ccggattcgtctgccggatctttgccgcctccgcccaatgcgactcttccactgccacca
cctcctccgtcttcttcatcttcttccggccatcatcgattgtctccttcgtcctcccac
ctgctcctggcgccgtcgacgacggtgcccgtggccatttcgacggtcgtgtatccgccg
tacaagaaactccatcgctacaacattccgaccggatcggacgtgcgcgatctcctcagc
agcaaggatcccaatcatctcagcccggattccagctgctcgacgacagccatcaataaa
tccatccgcaacgagtccagcacttcgccgtcgaccggcggcgggcagcagcagcaccac
caccacatccaccacctcagtggtcaccatccgtctcacggatcgcatccgttcaacagc
cggagtccgcaaccgtcgcagtcgcatcagttccacagcaccagcagcaacggatccaac
agccgatcggctccatctcctcatcatccgcataatgaatccggcggaagctccgccgga
agtttactgtacaacgtcaacaacgttgcccaaatgttctcctcggcacatttcaacatg
tacgcttacggcggagccggatcgagtgcatccaccggcggaggcagcggcagcacttcc
accgtccctcaccccctggcctcggcttcttcttcctcctccgccgctcacatccatccg
catttacccatgccgcacagtccagcggcttcggccgcttcttcatccggcggtaacgga
ggcgatcgttgccgtgacccgtccgaatcttccatccgatccagcgcttcatctctcagt
cccaactacagccaggccctgcactgccacacctcgcccggaagcggatcgctgtctccc
atcggatcgggcagtccgtctcccaacggaagccaagggcgcggctaccgctcgctgccg
tacccgttgaagaagaaggacggcaaaatgcactacgagtgtaacatttgctacaagacg
ttcggccagctgtccaacctgaaagttcacttgcggacgcattccggcgagcgccccttc
aagtgcaacgtttgcaccaagagtttcacccagctggcccacctccagaagcaccacctg
gtccacactggggagaaaccgcaccagtgcgacatttgcaagaagaggttcagcagcacg
tccaatctcaagacccacttgcggctgcattccggccagaagccctacgcctgcgatttg
tgtccggccaaattcactcagttcgtccacttgaagttgcacaagcgattgcacaccaac
gagcggccctacacttgcggcggatgccagaagaagtacatcagcgccagcggattgcgg
acccactggaagacgaccaattgcaagcccagcagtttggaggaagaaatggcccttgaa
cggtcgcccaccgactcggccggctacgattgcaacggctcggatgtggaagaaggaatg
gaggacaaggatgaggaaatgagtttggacggaatgagctgtgatagcgactcgttggcc
attcagcaacaccatcaccaccaaggccagcacgagcaccaccacgagctggacgtcaat
tcgacaacgggccgacggtctcaatcgcccgacgaagggaatctgcacggaagcgggcga
cagccatcgggaaactacgacgccgattcgtctagaccgagcgtcatcgaaacggccaac
aaagcgccacaagtcatcgaatgcacataa
DBGET
integrated database retrieval system
