Daphnia pulex (common water flea): DAPPUDRAFT_320530
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Entry
DAPPUDRAFT_320530 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K14312
nuclear pore complex protein Nup155
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
DAPPUDRAFT_320530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpx03019
]
DAPPUDRAFT_320530
Messenger RNA biogenesis [BR:
dpx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
DAPPUDRAFT_320530
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
TPR_WDR35
Motif
Other DBs
NCBI-ProteinID:
EFX78398
JGI:
Dappu1_320530
UniProt:
E9GQ73
LinkDB
All DBs
Position
Unknown
AA seq
1372 aa
AA seq
DB search
MTSPVSKTMMAPLASIQSTLIPSLEGIDLAGRILEWQLKNDNLFPSLADQIKIGEAHGVS
GLSDVDYPMLEVGPNGLPLLRQMGLVNRIPLPPELVEHFGHMQSYCMMGLFPLIQRAWLS
IDSDIYVWTYEDGGDLSYFDGLSEPIIAVELVQPKPGIFQPHIQYLLCLATTVEVVLLGV
SFSGSNTNYEEMHLLPEPLFAVPTDGAYIVTIRGTTDGRIFMGAKDGCIYEFFYQAEEGF
FSRKCRKINHSKSTLSYLIPSFINAAFSEEDPLVQMVQDETRRILYTRSEKGTIQVYDLG
HDGQAMTRVAAINTSTIVQSAANIARTVDRSSFKPLVCIAPVESSESTNLHLVAITASGV
RLYFSTLPWRSFNEATPSSRPSTLQLVQVRLPPGYAANASPQRPQQVHSALYSHGTTFLA
TTTASDNDVVWTLSNSLFPAAQQLSETQNTLGLDGKTWALAEVTPAPKRAIEASAFAPPA
PEPPLIVTQHSLGPRKFIFLTTQCCHVVTQLRPVDILRQLLFDASGPDSTAVRAFFQVLR
EDQACATALILACSTSIQDSQLADWAARAFFLLGGDVKISSHSVHPISSPASPFIVNSPG
HLNTTPSHFQHQQSYSTFTSPDGGGMGGFNPNAISTPQLAPYSPQSNTMIAGGGGEAADY
QFSGRHNGLYLYFGRILRPVWLMPLARDVGKPQQPLLDSVVTSEELLTVLGQLNALKGFV
HANIHQSGPSSYQSSEKGRIQEAQMQERKSLLAMKQLLDHTVEVLALWKVLCDHQLHLLG
QSLSAEMRMSLKTTLFRDLILSGSDTCIGLINSLIHRYLDDAASTDAISEKLRQVCPSLY
RNEDALCTKVNEQLLKARTTTMNRMDKERLLQQTLDTCKQIPARINLAHVCQQLSACQYY
GGVVELCCVVAEKLDPHHRALQCYTGQQEDPAAVEALLARKNCYQQMCLVLQKLYTAAAC
HPQSPSVPKSPGPMVQTTPLEHDEGLSPLEAQRLADETLSLALQSGDELCHVALFDWLTD
NKWDDKLLEIQSAHLENYLKRQTVVQGGQQQTDLVAKYDLLWKFYEKSGQFIAAARVLSR
LADAHSTAISLPLRIEYLSRAIVCARAAETSSFGNAVQGQFLYEMEEKMDVAKVQSQVLE
AVSRLHSRDADTISRLHSDLLDVTQLYEQFAEPLGLWECKLAVLHCANHYDAALVTNIWQ
NVISAEVKKLGNADSETKLATLGSKMKTLARTYAQSEQFFPLEFLVKTLETLSIRWNGPP
DWVVSIMLTAGVSFQRLFATYNRLYGAKDAVWQAEGKPNHLLKVLADMLNRLVDSSSGGM
AALVPTADRRSLVGQCVEAVGIYLTDLFCTVHATSAGLVAEFRTLQGKLELL
NT seq
4119 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaccggtatccaaaacaatgatggccccacttgcatccatccagtcaacgttg
attccttcattggaaggcatcgatctcgccggccgcatacttgaatggcaacttaaaaat
gacaatcttttcccttcactcgctgatcaaatcaagatcggggaagcccatggtgtcagc
ggtctatctgatgttgattaccccatgctagaagttggcccaaatggacttcctctactc
aggcagatgggacttgttaaccgaattcctttaccccccgagttggtggaacactttggc
cacatgcagagctactgcatgatgggccttttccccctcattcagcgtgcctggctgagc
atcgacagcgatatttatgtctggacttatgaggatgggggtgatttgtcctattttgat
ggtttgagtgagcccatcattgcagtggagcttgttcaacccaaaccaggcatttttcag
cctcatatccaatatctgctatgcctcgccaccaccgtggaagtggtcctgttgggtgtg
agtttctctggctccaacacaaactatgaagaaatgcatcttttacccgaacccttgttc
gccgttccaaccgacggggcttacattgtgaccatcaggggcacgacagacggccgaatc
tttatgggagccaaagatggttgcatttacgaattcttttaccaggccgaggaaggattt
ttcagccgcaagtgccgcaaaatcaatcactcgaagagcaccctgtcctatctgattccg
tcattcatcaatgcggccttcagtgaagaggatcccctcgtccagatggtgcaagatgag
actaggcgcattctctacacccgctcggaaaagggaaccattcaagtctacgatttgggc
cacgacggacaagccatgacccgtgtggctgccatcaacacgagcacaattgtccagtcg
gctgccaacattgccaggacggtggatcgatccagttttaagcctttggtttgcatcgct
cccgtcgagtcgagcgagtcgaccaatttgcaccttgtagccattacggcctctggcgtc
aggttgtactttagcacattgccctggcgtagtttcaacgaagccacgccttctagccgc
ccgtcgacactccaactggttcaagttcgactcccgcccggctacgcggccaacgcttcg
cctcaacggccccagcaagtccattcggcgctctactctcacggaacgacttttttagcc
accaccacggcttcggacaatgacgtggtctggaccttgtccaattctctgtttccagct
gcccagcaactgtcggagacgcaaaacactctgggcttagacggaaagacctgggcgctg
gccgaagtcaccccagctcctaaaagggccattgaggcgtcggcgtttgctccaccagcc
ccggaaccgccactcatcgtcacccagcactcgctgggaccgcgaaaattcattttcctg
acgacccagtgctgtcacgtcgtcacccagctgagaccggtggatatcctgcgccagttg
ctctttgacgcttcagggccagacagtacggccgttcgggcatttttccaggttcttcga
gaagatcaagcctgcgccactgccctcattttggcctgttccaccagcattcaagactct
cagctggccgattgggccgcccgggctttcttcctcctcggtggcgacgtgaaaatctct
tcccattcggtccatcccatttcgtcacccgcctcgcctttcattgtcaactctcccggc
catttgaacacgacgcccagccacttccagcaccaacaatcttactcgactttcacttcg
cccgacggtggcggaatgggcggattcaaccccaacgccatttcgactccccagttggcg
ccctattcaccccagtcgaataccatgatcgccggtggaggtggcgaagcggccgactat
cagttctctggccgccacaacggactctacttgtatttcggtcgtattctcagaccagtt
tggctcatgcccctggccagggatgtaggcaaaccccaacagccgctgcttgacagtgtc
gtcaccagtgaagaattgttgactgtcctgggccagttgaatgccctcaaaggtttcgtt
cacgccaacatccaccagagcggacccagcagttaccagtcgagcgaaaagggccgcatt
caggaagctcaaatgcaagaaagaaagtctttgttggccatgaaacagctgctggaccac
acggtggaagtgctggccctgtggaaagttttgtgcgaccaccaacttcatttgcttggc
caatcgctgtcggctgaaatgcggatgtcgctgaagacgacgctcttccgcgacttgatc
ctctccggctcggacacttgcatcggcctcatcaactcgctcatccaccgctacctggac
gatgcggccagcacggacgccatcagcgagaaactcagacaagtctgcccctctctctac
cgcaacgaggatgccctgtgcaccaaagtgaacgagcagttgctcaaggcccgaacgacg
acgatgaatcggatggacaaggagcgtctactccagcaaaccctggacacgtgcaaacag
attccggcccgcatcaatttggcccacgtctgtcagcagctgtcggcctgtcagtactat
ggaggcgtcgtggagctttgctgcgtcgtggcggagaaactggaccctcaccaccgggcc
ctgcagtgctacaccggccagcaggaggatcccgccgccgtggaggctcttttggcccgc
aagaattgctaccagcaaatgtgtctggtcttgcagaagctctacacggcggccgcctgt
catccccagtcgcccagcgttcccaaatcacccggaccgatggtgcagacgactccgctg
gaacacgacgaaggactcagcccgttggaagctcagcggttggccgacgagacgttgtcg
ctggccttgcagtcgggcgatgaactctgtcacgtcgccctgttcgattggctgacggac
aacaagtgggacgacaaattgctggaaatccaatcggcccacttggagaattacctcaag
aggcaaacggtcgtccagggtggccaacagcaaacggacctggtggccaagtacgacctg
ctgtggaagttttacgagaagagtgggcagtttatcgcggccgctcgagttctttcccgc
cttgccgacgctcacagcacggccatcagtttgccgttgaggatcgagtacctttcgcgg
gccattgtctgcgccagagcggccgagacgagctccttcggcaacgccgtccagggccag
ttcctctacgagatggaagagaagatggacgtggccaaagtccagtcgcaagtcctggag
gccgtttccaggctgcacagtcgcgatgccgacaccatcagtcggttgcattccgacctg
ctggacgtgactcagctctacgagcagttcgccgagcctttgggtttgtgggagtgcaag
ctggccgttttgcactgcgccaatcactacgatgcggccctggtcaccaacatttggcag
aacgtcatcagcgccgaagtcaagaaactgggcaacgccgactctgaaaccaaattggcc
accctgggcagcaagatgaagacgctggctcgcacctacgcccagtctgaacagtttttc
cccttggaatttctcgtcaagaccctggaaacgctttccatccgctggaacggacctcca
gattgggtcgtgtccatcatgttgacggctggcgtgtctttccagcgcctgtttgccact
tacaaccggttgtacggagccaaagacgcggtgtggcaggcggaaggcaaacccaaccac
ttgctcaaagtgctggccgacatgttgaaccgattggtcgactcttcgtccggcggcatg
gcggccctggtccccactgccgatcgccgatctctcgtcggccagtgcgtcgaggctgtc
ggaatttacctgacggacctgttctgcacggtccacgccacgtcggccggtctcgtcgcc
gaattccgcactctgcaaggcaaattggaactcttgtga
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