Daphnia pulex (common water flea): DAPPUDRAFT_321741
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Entry
DAPPUDRAFT_321741 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K06100
symplekin
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
DAPPUDRAFT_321741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpx03021
]
DAPPUDRAFT_321741
03019 Messenger RNA biogenesis [BR:
dpx03019
]
DAPPUDRAFT_321741
Transcription machinery [BR:
dpx03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
DAPPUDRAFT_321741
Messenger RNA biogenesis [BR:
dpx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
DAPPUDRAFT_321741
U7-dependent histone pre-mRNA processing factors
DAPPUDRAFT_321741
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
HEAT
Adaptin_N
Cnd1
DUF8759
Motif
Other DBs
NCBI-ProteinID:
EFX77164
JGI:
Dappu1_321741
UniProt:
E9GTR9
LinkDB
All DBs
Position
Unknown
AA seq
1105 aa
AA seq
DB search
MDKIKIEKGTSTEEQIVELLNSAATESDDQSKVDCLIKIQELIIHKEPGLLDNFVDEITA
FQHDRSADVRKTVVGFIEEACKVDQELLGKVMHSLQLLLNDTSIAVLKRVIQALTQLHKV
TLQWLAKAKSVTGLMESTWNMLNQMKSQIAKMIDHDNDGVRTIAVKFYEMIIISQTYPEP
DSVRKENEFSLEEVPLTLKIARPRKLEEEAQLMIEDLMKYHGSAHISSANLMACMGSLTH
IAKSRPQFLDRIVTAMEMLHANLPPTLSKSQVNSVRKHLKLQLLTILKHPASHERSGNIK
TLLADLGATPQEINKALPSPEEIAKYPRRSERAEDSKSGPAAKRRKIEVDAVPLNRENTK
EKALSITEEFIVQHLSTKKATDLVIDALPRITNNMPPHFSSTYTPVSEAGTPKQIRHVAR
LLASQMTNVGIGPGVDQVGYTPKMGNDFEDDDEEMDDGVSAVSPRFRDGDDPAKPGIAQI
PPQVQIRARQRALKLAEIVKPLTPQMNESMARSALQRVLKAERTAMLGGVAANRQKILAS
LATLFSGDFKDLVVEYIMSDPRSRIELAFSWLYEEYSMVMGFCHQSTIVKDEYRQSAIDS
YSSVFCSLVNELKKQTDLKEREMLLSRLFHESPHIPEEGVSILRSMLCEDAKLVDISIQI
VRQLVHRPTKQLVYLNVLLEISSHEVEEVRSAVLSCLTDLYDRGALRRVIEDYAVMYLKF
LLLEEPPALLCGPEKGRSEIITTWTEEITKACLYLFLAILHSNEKLIHELALVYVQANAD
IKRRILRMVEGPVEGMGMESPELLKLVETCPKGAETLLIRIIHILTDKYPPTHALVDRVR
NIYQQRVPDVRFLIPVLNGLGKKEVLSVLPKLIKLNPDVVKKVFGRLLGTVGDSSATYPS
PLSPTELLIALHNIDSTQCDMKTIMKATSICFMERGVYTQEVLAVVMQQLMDQNPLPTLL
MRTVLQSLSLYPRLSGFVMNILQRLIVKQVWKQKKVWEGFIKCCQRTKPQSFAVILQLPP
QFLQELLNTSPDMKTPLLEHVMAFTDNQRMHIPKLTMDVINGIAQFQAEAEDITNEDSKD
KEMGSPEPMESAFHGDIEPPAPGET
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggataaaattaaaattgaaaaaggaaccagtactgaagaacagatcgtagagcttttg
aactcggcagctacagaaagcgacgatcaatcaaaagtcgactgtttgatcaaaattcaa
gagttgattattcacaaggaaccaggcctgttggataattttgttgatgaaataacagct
tttcaacatgatcgctctgctgatgtcagaaaaacagttgttggtttcattgaggaagcc
tgcaaagtagaccaagaactcttaggaaaagtcatgcacagtctacagcttcttttaaat
gacacttcaatagctgtattaaaacgagtgattcaagctttgactcaactacacaaagtt
acccttcaatggcttgcaaaagcaaaatctgttactggattaatggagagtacatggaac
atgttgaatcagatgaagtcccaaattgccaagatgatagaccatgacaatgatggagtg
cgcactatagctgtaaaattctatgaaatgattatcatatcacaaacttaccccgaaccg
gatagtgtacggaaagaaaatgagtttagtttagaggaagttccattaactctgaaaata
gccagacctagaaaactggaagaagaagctcaactcatgattgaagatttgatgaaatat
catggatctgcacatatcagcagtgcaaacttaatggcttgtatgggttcactcactcac
atagcaaagagccgacctcaatttttggatcggattgtaactgccatggaaatgcttcat
gccaatttacctccgactttgtcaaaatctcaagttaattcagttcgcaaacacttaaaa
ttgcaattgttaaccatactcaaacatcccgcatctcacgagcgcagcggaaacatcaaa
acacttcttgctgatttgggtgccacacctcaagaaatcaacaaggcactgccaagtcct
gaagaaattgcaaagtatccgaggcgatcagaacgtgctgaagattctaaaagcggccca
gctgctaagcgcagaaaaatagaggttgatgccgtccctctaaaccgagaaaatactaaa
gaaaaagctctaagcattaccgaggaatttatcgtccagcatctttccacgaaaaaagcc
accgatcttgtgattgacgcgctacctcgcattaccaataatatgcctccacatttttct
tccacctacactcccgtctctgaggctggaacgccaaaacaaattcgtcacgtggctcgg
cttttggcttctcaaatgacgaatgtcggaatcggacctggagttgatcaagtcggatat
actccaaaaatgggaaatgactttgaagacgatgacgaagaaatggatgacggtgtatct
gcagtgtcgccaagatttcgtgatggtgatgatccagctaaaccaggaatagctcaaatt
ccaccccaagtacaaattcgtgctaggcaaagagcgttgaaattggcggaaatcgtcaag
cccctgacaccgcaaatgaacgagtcgatggctcgatcagctcttcaacgcgtcttgaaa
gccgagcgaactgccatgcttggaggtgttgccgccaataggcaaaagattttagcctct
cttgctactctcttttctggagattttaaggatctcgtggtagagtacatcatgtcggat
ccgcgctcaagaatcgaactggctttctcgtggctctatgaggaatattcgatggtcatg
ggcttttgtcatcagtcgacaattgtcaaagacgagtaccgtcagtcagctatcgacagt
tactccagcgtattttgttcgttggtaaatgaattaaaaaaacaaactgacctgaaagag
cgagagatgttgctgagccgattatttcacgaatcgcctcacattccggaggagggtgtt
tcgattttgcgatcaatgttgtgtgaggacgctaaattggtggatatttccattcagatt
gttcgccaactagttcaccgtcccactaagcaactggtttacttaaatgtgttgttggaa
atcagtagccacgaagtcgaagaagtccgttcagctgtcctttcctgtctgactgattta
tatgaccgtggagctcttcgtcgcgtcattgaggattacgctgtaatgtatctaaaattt
ttgctgttggaagaaccacctgctcttctctgtggacccgaaaaaggcagaagcgaaatt
ataacaacatggaccgaagagattactaaagcgtgcctttatctatttcttgcgattctt
cactcaaatgagaaattgatccacgaattggcacttgtttacgtccaagcgaatgcggac
atcaagagaagaattttgcgaatggttgagggtcctgttgaaggcatgggaatggaatcc
cccgaattactaaaattagtagaaacttgccctaaaggagctgagacattgcttatcaga
atcatacatattctcactgataaatatccaccaacccatgcattagtcgatcgtgtacgc
aatatctatcaacagcgtgttcctgatgtccgctttctcattccggtccttaatggtctc
ggtaaaaaagaagttctctccgtgctcccaaaattgatcaagctaaaccctgatgtcgtg
aaaaaagtatttggtcgtctattgggaactgtgggagattcatctgccacttatcccagt
ccgttgtctcctactgaacttttgattgcgctgcataatattgacagtacccaatgtgac
atgaaaacaatcatgaaggcaacatcaatttgcttcatggaacgaggggtctacacacag
gaagtgcttgcagttgtcatgcaacagttaatggatcaaaatccactaccaacactactg
atgcggaccgttctgcaatcattatctctttacccaaggttatcaggatttgtaatgaat
atattacaaagactcatagtcaaacaggtttggaagcagaaaaaggtttgggaaggattc
atcaaatgctgccaaagaacaaagccacaaagttttgctgttattctccagctacctccg
cagttcctacaggaattactgaatacatctcctgatatgaagacacctcttttggaacat
gttatggctttcacagataatcaacgaatgcacattcctaagcttacgatggatgtcatc
aatggaattgctcaatttcaagccgaagccgaagacataactaacgaagattcaaaagat
aaagaaatgggatctcctgagcccatggaatcagcgtttcatggagacatcgaaccaccc
gctccgggggaaacctaa
DBGET
integrated database retrieval system