KEGG   Daphnia pulex (common water flea): DAPPUDRAFT_321741
Entry
DAPPUDRAFT_321741 CDS       T04347                                 
Name
(GenBank) hypothetical protein
  KO
K06100  symplekin
Organism
dpx  Daphnia pulex (common water flea)
Pathway
dpx03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:dpx00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    DAPPUDRAFT_321741
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dpx03021]
    DAPPUDRAFT_321741
   03019 Messenger RNA biogenesis [BR:dpx03019]
    DAPPUDRAFT_321741
Transcription machinery [BR:dpx03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     DAPPUDRAFT_321741
Messenger RNA biogenesis [BR:dpx03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     DAPPUDRAFT_321741
    U7-dependent histone pre-mRNA processing factors
     DAPPUDRAFT_321741
SSDB
Motif
Pfam: Symplekin_C SYMPK_PTA1_N HEAT Adaptin_N Cnd1 DUF8759
Other DBs
NCBI-ProteinID: EFX77164
JGI: Dappu1_321741
UniProt: E9GTR9
LinkDB
Position
Unknown
AA seq 1105 aa
MDKIKIEKGTSTEEQIVELLNSAATESDDQSKVDCLIKIQELIIHKEPGLLDNFVDEITA
FQHDRSADVRKTVVGFIEEACKVDQELLGKVMHSLQLLLNDTSIAVLKRVIQALTQLHKV
TLQWLAKAKSVTGLMESTWNMLNQMKSQIAKMIDHDNDGVRTIAVKFYEMIIISQTYPEP
DSVRKENEFSLEEVPLTLKIARPRKLEEEAQLMIEDLMKYHGSAHISSANLMACMGSLTH
IAKSRPQFLDRIVTAMEMLHANLPPTLSKSQVNSVRKHLKLQLLTILKHPASHERSGNIK
TLLADLGATPQEINKALPSPEEIAKYPRRSERAEDSKSGPAAKRRKIEVDAVPLNRENTK
EKALSITEEFIVQHLSTKKATDLVIDALPRITNNMPPHFSSTYTPVSEAGTPKQIRHVAR
LLASQMTNVGIGPGVDQVGYTPKMGNDFEDDDEEMDDGVSAVSPRFRDGDDPAKPGIAQI
PPQVQIRARQRALKLAEIVKPLTPQMNESMARSALQRVLKAERTAMLGGVAANRQKILAS
LATLFSGDFKDLVVEYIMSDPRSRIELAFSWLYEEYSMVMGFCHQSTIVKDEYRQSAIDS
YSSVFCSLVNELKKQTDLKEREMLLSRLFHESPHIPEEGVSILRSMLCEDAKLVDISIQI
VRQLVHRPTKQLVYLNVLLEISSHEVEEVRSAVLSCLTDLYDRGALRRVIEDYAVMYLKF
LLLEEPPALLCGPEKGRSEIITTWTEEITKACLYLFLAILHSNEKLIHELALVYVQANAD
IKRRILRMVEGPVEGMGMESPELLKLVETCPKGAETLLIRIIHILTDKYPPTHALVDRVR
NIYQQRVPDVRFLIPVLNGLGKKEVLSVLPKLIKLNPDVVKKVFGRLLGTVGDSSATYPS
PLSPTELLIALHNIDSTQCDMKTIMKATSICFMERGVYTQEVLAVVMQQLMDQNPLPTLL
MRTVLQSLSLYPRLSGFVMNILQRLIVKQVWKQKKVWEGFIKCCQRTKPQSFAVILQLPP
QFLQELLNTSPDMKTPLLEHVMAFTDNQRMHIPKLTMDVINGIAQFQAEAEDITNEDSKD
KEMGSPEPMESAFHGDIEPPAPGET
NT seq 3318 nt   +upstreamnt  +downstreamnt
atggataaaattaaaattgaaaaaggaaccagtactgaagaacagatcgtagagcttttg
aactcggcagctacagaaagcgacgatcaatcaaaagtcgactgtttgatcaaaattcaa
gagttgattattcacaaggaaccaggcctgttggataattttgttgatgaaataacagct
tttcaacatgatcgctctgctgatgtcagaaaaacagttgttggtttcattgaggaagcc
tgcaaagtagaccaagaactcttaggaaaagtcatgcacagtctacagcttcttttaaat
gacacttcaatagctgtattaaaacgagtgattcaagctttgactcaactacacaaagtt
acccttcaatggcttgcaaaagcaaaatctgttactggattaatggagagtacatggaac
atgttgaatcagatgaagtcccaaattgccaagatgatagaccatgacaatgatggagtg
cgcactatagctgtaaaattctatgaaatgattatcatatcacaaacttaccccgaaccg
gatagtgtacggaaagaaaatgagtttagtttagaggaagttccattaactctgaaaata
gccagacctagaaaactggaagaagaagctcaactcatgattgaagatttgatgaaatat
catggatctgcacatatcagcagtgcaaacttaatggcttgtatgggttcactcactcac
atagcaaagagccgacctcaatttttggatcggattgtaactgccatggaaatgcttcat
gccaatttacctccgactttgtcaaaatctcaagttaattcagttcgcaaacacttaaaa
ttgcaattgttaaccatactcaaacatcccgcatctcacgagcgcagcggaaacatcaaa
acacttcttgctgatttgggtgccacacctcaagaaatcaacaaggcactgccaagtcct
gaagaaattgcaaagtatccgaggcgatcagaacgtgctgaagattctaaaagcggccca
gctgctaagcgcagaaaaatagaggttgatgccgtccctctaaaccgagaaaatactaaa
gaaaaagctctaagcattaccgaggaatttatcgtccagcatctttccacgaaaaaagcc
accgatcttgtgattgacgcgctacctcgcattaccaataatatgcctccacatttttct
tccacctacactcccgtctctgaggctggaacgccaaaacaaattcgtcacgtggctcgg
cttttggcttctcaaatgacgaatgtcggaatcggacctggagttgatcaagtcggatat
actccaaaaatgggaaatgactttgaagacgatgacgaagaaatggatgacggtgtatct
gcagtgtcgccaagatttcgtgatggtgatgatccagctaaaccaggaatagctcaaatt
ccaccccaagtacaaattcgtgctaggcaaagagcgttgaaattggcggaaatcgtcaag
cccctgacaccgcaaatgaacgagtcgatggctcgatcagctcttcaacgcgtcttgaaa
gccgagcgaactgccatgcttggaggtgttgccgccaataggcaaaagattttagcctct
cttgctactctcttttctggagattttaaggatctcgtggtagagtacatcatgtcggat
ccgcgctcaagaatcgaactggctttctcgtggctctatgaggaatattcgatggtcatg
ggcttttgtcatcagtcgacaattgtcaaagacgagtaccgtcagtcagctatcgacagt
tactccagcgtattttgttcgttggtaaatgaattaaaaaaacaaactgacctgaaagag
cgagagatgttgctgagccgattatttcacgaatcgcctcacattccggaggagggtgtt
tcgattttgcgatcaatgttgtgtgaggacgctaaattggtggatatttccattcagatt
gttcgccaactagttcaccgtcccactaagcaactggtttacttaaatgtgttgttggaa
atcagtagccacgaagtcgaagaagtccgttcagctgtcctttcctgtctgactgattta
tatgaccgtggagctcttcgtcgcgtcattgaggattacgctgtaatgtatctaaaattt
ttgctgttggaagaaccacctgctcttctctgtggacccgaaaaaggcagaagcgaaatt
ataacaacatggaccgaagagattactaaagcgtgcctttatctatttcttgcgattctt
cactcaaatgagaaattgatccacgaattggcacttgtttacgtccaagcgaatgcggac
atcaagagaagaattttgcgaatggttgagggtcctgttgaaggcatgggaatggaatcc
cccgaattactaaaattagtagaaacttgccctaaaggagctgagacattgcttatcaga
atcatacatattctcactgataaatatccaccaacccatgcattagtcgatcgtgtacgc
aatatctatcaacagcgtgttcctgatgtccgctttctcattccggtccttaatggtctc
ggtaaaaaagaagttctctccgtgctcccaaaattgatcaagctaaaccctgatgtcgtg
aaaaaagtatttggtcgtctattgggaactgtgggagattcatctgccacttatcccagt
ccgttgtctcctactgaacttttgattgcgctgcataatattgacagtacccaatgtgac
atgaaaacaatcatgaaggcaacatcaatttgcttcatggaacgaggggtctacacacag
gaagtgcttgcagttgtcatgcaacagttaatggatcaaaatccactaccaacactactg
atgcggaccgttctgcaatcattatctctttacccaaggttatcaggatttgtaatgaat
atattacaaagactcatagtcaaacaggtttggaagcagaaaaaggtttgggaaggattc
atcaaatgctgccaaagaacaaagccacaaagttttgctgttattctccagctacctccg
cagttcctacaggaattactgaatacatctcctgatatgaagacacctcttttggaacat
gttatggctttcacagataatcaacgaatgcacattcctaagcttacgatggatgtcatc
aatggaattgctcaatttcaagccgaagccgaagacataactaacgaagattcaaaagat
aaagaaatgggatctcctgagcccatggaatcagcgtttcatggagacatcgaaccaccc
gctccgggggaaacctaa

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