Daphnia pulex (common water flea): DAPPUDRAFT_322171
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Entry
DAPPUDRAFT_322171 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K04681
retinoblastoma-like protein 1
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
DAPPUDRAFT_322171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dpx03000
]
DAPPUDRAFT_322171
Transcription factors [BR:
dpx03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
DAPPUDRAFT_322171
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
Motif
Other DBs
NCBI-ProteinID:
EFX76662
JGI:
Dappu1_322171
UniProt:
E9GV66
LinkDB
All DBs
Position
Unknown
AA seq
1052 aa
AA seq
DB search
MGLSEDADQENTEERFRGLCADLNIDKNTADEAWRNYETISTNYTLEGDRIHWLCCALYV
ACRNSTVPTVGQVGTVEGNCVSLTQLRRKCNISMLDFFDKSRKWADMANLSEELRRKFVS
LERNFEVCSVIFKKYDEMFKEIFQDPVNDPPRQPRSRKSRKLPCSAKDVYDFCWAFFVRI
KTNFSQIHEELVSCFHLLLACLDYIYGNSLVANRRELFNPQFPGLPSDFHSRDYKAPTEP
GCIVECLYSRNSSQDEKTVVDVKRIKTHVLRPYVKSLIEKEVLKGDKRTLCGILDTAVFD
LNKKVVNNDYEDYVHRVGDFDERIFSSPDALTEIGTPVKATFNSIASFEEQKLMVYPARR
NLQSQFDGSHHLALATPLTGRNFLKAKEPGSVTPVSTATQSVSRLQALVSGRQTGPSEEL
RRIFSECSNNPGESIQARVKEMGEKFCAHYVNQADEGRTNGFSMDMARKRLQLGESLYYK
VLEKIIIDERRRLKAGTDLSGILQQDMLHQLLITCCLEIVLFSYNSQRTFPWILEVFPIQ
PFYFYKVIEVLIRAEDLSRDVVKHLNHMEEQILESMAWRYQSPLWEYLKSCDQPIPSCEE
VSLPSQLLPPTPSAPQTPAVVQSSDPVRNTPQQPIPYSPSTYVTNKRAESSLAASLLQSP
VSSVASVNERTPAQSSRRKLFPGPETVPPSPSNTAATPASVGNAIKASSKLELNDQKMEL
LPSPSVVTTADNKPKRTGSLSLFFRKFYHLASVRLQDLCNRLELYEEDLRKKIWTCFEFS
VMKHSDLMQDRHLDQILMCAVYVICKVTGRDKNFTDIMRCYRTQPHASSHVYRSVLLCTK
ARRGSASEEDDEAATGSTVKVNGDEKKAETNGEKALPPVRSSSTLPFPQPSSCPPTPTGL
AGTSSSFEYEDRGDLILFYNTVYVRRLQAFALKFSNRNRLVESLPLSPLPLQRHVPLSPR
RKVSAKHTVFISPLKGNVISHSPLPMRYSFNRSPSKDLQAINAFLREERPTKRLLSYEIG
PRDAADAAMAPPPPKFAMTVENAGAARKISFH
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgggtctgtctgaagatgccgaccaagaaaacactgaggagaggtttcgcggcctttgt
gccgatctcaacattgacaaaaacacagccgatgaagcctggcgaaactatgaaactatt
tccaccaactacactcttgagggtgatcgaatccattggctatgttgtgccttgtatgtt
gcttgccgaaacagcactgttccaactgtgggacaagttggaacagtagagggaaactgt
gttagtcttactcaactcagacgaaaatgcaacatcagcatgctagatttctttgacaaa
tcgaggaaatgggcagacatggcaaacctttctgaagaattacgtcgcaagtttgttagc
ttggaacgtaactttgaagtctgctctgtgattttcaagaagtatgatgagatgttcaaa
gaaatcttccaagatccggttaacgaccctcctagacagccacgttctcgaaagtcacgc
aaacttccttgctctgcgaaggatgtttacgacttttgctgggctttcttcgtacgcatt
aagactaatttctcacagatccacgaagagctagtcagctgctttcatttgctgctagct
tgtcttgattacatctacggaaattctcttgttgccaatcgccgagaactcttcaaccct
caatttcctggtctgcctagcgacttccacagtcgcgattacaaagcccctactgaacct
ggctgcatcgttgagtgtctttactcaagaaacagcagccaggacgaaaaaaccgttgtt
gacgtcaagcgaatcaaaacgcatgttctcagaccttacgtcaaaagcctcatcgaaaaa
gaggtactgaagggtgacaaaagaactctatgcggaattctcgacacagctgtcttcgac
ttaaacaaaaaagtggtcaacaatgactatgaggattacgtgcatcgtgtcggcgatttc
gacgagcgtattttctccagtcctgatgctctaacagagataggaaccccggtgaaagcc
actttcaacagtatagcttctttcgaagaacaaaagctgatggtctacccagcccgccgc
aatttgcaatcacaattcgatggttcacatcacctggcgctggccacgcctttgaccggt
cgaaatttcctcaaagccaaagaacctggatcggtaacgcccgtatcgacagccactcaa
agtgttagccggctgcaggctctggtctccggtcgtcaaacgggacctagcgaggagctc
agacgtattttcagtgagtgttctaacaatccaggggagagtattcaagccagggttaag
gaaatgggcgagaaattctgcgctcactatgtcaatcaggccgatgaagggcgcactaat
ggtttcagtatggatatggctcgcaaacgtctgcagttaggagaaagtctgtactataag
gttttggaaaaaatcatcatcgacgaacgcagacgtctcaaggcaggcacagatctatca
ggaattctacaacaagatatgcttcatcagcttttgatcacttgctgcctagagattgtt
ctgttctcttacaactcccagcgcacattcccatggatcttggaagtctttcctattcaa
cctttctacttttataaggtaattgaagtactcattcgggctgaagatttatctcgtgac
gtagtaaagcacctaaatcacatggaagagcaaattctcgaatctatggcatggcgttac
caaagtcccttgtgggaatacttaaagagctgcgatcaacccattccctcttgtgaagaa
gtttcgctaccaagccaacttctgccaccaaccccttctgctccgcagactccggctgtc
gtccagtcatcagatccagtcagaaacactccgcagcagccaataccttattcgccatcg
acttacgtcaccaataagagagcggaatctagtcttgctgcctctcttctgcaatcaccc
gtgtcatcggtggcgtcagtaaatgaacgtacgccagcccaatcgtcaaggaggaaattg
tttcccgggcctgaaacagttccgccaagtccctctaatacagcggctactcctgcttct
gttggcaatgcaataaaggcttcttccaaactggaattaaatgatcagaaaatggaactt
ctgcccagtcccagtgtggtaacaacggctgacaataaacctaagagaacgggatccctg
agtctattttttagaaagttttatcatttggcatccgttcggctacaagacttgtgcaat
cgtctcgagttgtatgaagaagacttgcgtaagaagatctggacatgtttcgagttttcg
gtgatgaagcatagcgatttaatgcaagatcgtcaccttgatcaaattttgatgtgtgca
gtctacgtaatttgtaaggtaactggtagagacaagaactttaccgatattatgcgctgc
tatcgaacacaaccccatgcttcgagtcacgtatatcgcagtgttttgctatgcaccaaa
gcacgccgtggatctgcttccgaagaagacgatgaagcagctactgggtctactgttaaa
gttaacggtgacgaaaagaaagcagaaaccaatggagagaaggcacttccaccagttcgc
tcttcgtcgacattgcctttccctcagccttcgtcctgtccacctaccccgacaggttta
gctggcacctcatccagcttcgagtacgaagatcgaggagatttgattctattctacaac
acggtctacgttcgtcgacttcaggcctttgctcttaaattctcaaacaggaaccgtctg
gtagagtcattgcccttgtcgcctttgcctttacagcgccacgttcctctttctccgcgt
cgaaaagtgtctgcaaagcatacggtctttattagtccgcttaaaggcaatgtcatctct
cattcgccgctgcctatgcgttatagctttaatcgtagcccgtcgaaagatcttcaggcc
atcaatgcctttttacgcgaagagcgtccgacgaaacgcctgctctcctacgagattggt
ccacgagacgcagccgacgctgctatggctccacctccgcccaaattcgccatgacagtc
gaaaacgccggtgcggcgcgcaagatctcttttcattga
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