Daphnia pulex (common water flea): DAPPUDRAFT_324210
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Entry
DAPPUDRAFT_324210 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
dpx
Daphnia pulex (common water flea)
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dpx01009
]
DAPPUDRAFT_324210
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpx03019
]
DAPPUDRAFT_324210
Protein phosphatases and associated proteins [BR:
dpx01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
DAPPUDRAFT_324210
Messenger RNA biogenesis [BR:
dpx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
DAPPUDRAFT_324210
mRNA cycle factors
Stress granule specific factors
DAPPUDRAFT_324210
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
Staufen_C
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
EFX74549
JGI:
Dappu1_324210
UniProt:
E9H109
LinkDB
All DBs
Position
Unknown
AA seq
694 aa
AA seq
DB search
MNNVQERSAYESIGRNRDVKDQVFEPNWKMSGAAQEALIPVQGLELKNTIEEIHKIETFE
NIGCIEKDNQCESTDDTDFSMGLQDKSEQTGKKKTPMCLVNELARHHKIQPQYRLTEESG
PAHQKTFVVNLKLGEEQYSATGQSIKKAQHAAAELALKKTDYQVPEPKPKVKCMSNSQCD
KPITPTVELNALAMKLNFQPVYTNLAPLSIKSKMQEDSEQSPVCKGDFRLNQVDQNERFL
NADFQRQHTHTSQRFPSSSNQRYYFNRYQQAPVTHRVTLAVGHVFVTGEGLQPQAARHHA
AQQALEQLRGQTLIDKVQLDEAAVISEANTDSDLKSPVSLVHELALKLNLTVEFTVLNES
GPPHMRNFIVQCKLGEVTTQGEGNCKKVAKRKAAEIMIDELKKVHPNGVLRPLEENNVSP
PRIRVKNKSTIARKKPRNLVKDVTSASNGCLGTKPQDPISQLVQLQQARKEKEPVFTVLS
ERGIPRQSPEFVVEVAVGSVTATGVGTKKKDAKRAAALKALDALGDSSKSSASSDTSVAV
ETLLQDAPLSNSNCTGRQMVPGLLLLGGGQSRKIDSPFITNSSTATGIKETTQPSRPPKT
SGGLRPEIRLRYLAQVLEYEVEFSDFPKGKKGDFVSLVTLNTNPPQVSHGLGATLEEAHD
NAASNMMKLLSEGSQDDTVGPNKENADQRSTGPQ
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgaataatgttcaagaaagaagtgcttatgaatcaattggaagaaacagagatgttaaa
gatcaggtatttgaacctaattggaaaatgtcaggtgctgcacaagaagccctgatacca
gttcaaggtctagagttgaagaacacaattgaagagatacacaaaattgaaacatttgag
aatattggatgcattgagaaagataatcaatgtgaatctactgatgatactgatttctca
atgggtttgcaagacaaatctgagcagacagggaaaaagaaaaccccaatgtgtctagtc
aatgagcttgctcgccaccataagatacagcctcagtatcgtctaacagaggaatcagga
cctgcacatcagaaaacatttgttgtgaacctgaaattgggtgaggagcagtatagtgca
actggacaaagtattaagaaagcacaacatgctgctgctgaactagcccttaagaagact
gattaccaagttcctgaacctaaacctaaagtgaaatgcatgtcaaactctcaatgtgac
aaacctattaccccaactgtggaacttaatgctttggccatgaagctaaattttcaacct
gtatacacaaatctggcgcctttgtctattaaatccaagatgcaagaagatagtgaacaa
tcacccgtgtgtaaaggtgactttcgattaaatcaagtggatcaaaacgaaagattttta
aacgccgattttcagcgtcaacatactcacacgtctcagcgatttccctcaagctcaaat
cagagatactactttaatcgttaccaacaagcaccagtgacgcacagagttactttagca
gttggacatgttttcgttactggtgaaggacttcaacctcaagcggcacggcaccacgct
gcacaacaggcactagagcagttacggggccaaacgttgattgacaaagtgcaattggat
gaggctgcagttattagcgaagcaaacacggattcggatttaaaatctcccgtctcctta
gttcacgaattggcactaaagttaaatttaactgtagaatttacagttttgaatgagagt
ggaccgccccacatgagaaatttcatcgtgcagtgcaaactaggggaagttaccacgcaa
ggagaaggaaactgtaaaaaggtggccaaaagaaaagcagcagagatcatgatcgatgaa
ttaaagaaggtccaccctaacggagtcttgcgtcctttggaagaaaataacgtaagccca
ccgcgcatccgcgtcaaaaataaatcaaccatcgccaggaaaaagccacgcaatttagtc
aaggatgttacatctgcatctaacggttgccttggcacaaaacctcaagatccaatatct
caactagttcaactgcagcaggcgaggaaagaaaaggaaccagtatttactgttttgtca
gaaaggggaatcccccgtcagtcccccgaatttgttgtagaagttgctgttggctcagta
acggcaacaggtgttggaactaaaaaaaaagacgccaaacgcgctgctgctctcaaggcg
ctggatgctcttggtgattccagcaagtcatctgcttctagcgatacatcagttgctgtt
gagacgctcttacaggatgcgccactctccaacagcaattgcacaggtcgtcaaatggtt
ccgggtcttcttttattaggaggcggacagagtaggaaaattgactctccattcataacc
aattcatcaactgccactggaattaaagaaactactcaaccgtctcgtccgcccaagact
tctggagggttgcgcccggaaatacgtctaaggtacttggcccaagtactggaatacgag
gtcgaattttccgattttccaaagggcaagaaaggagatttcgttagccttgtgaccttg
aatacaaatcctccgcaagtgtcgcacggacttggtgccactttggaagaagcccatgat
aacgctgcttccaatatgatgaaattgctttctgaagggtctcaagatgacaccgttggt
cccaacaaagaaaacgcagatcaacgaagcacaggaccccaataa
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