Daphnia pulex (common water flea): DAPPUDRAFT_325677
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Entry
DAPPUDRAFT_325677 CDS
T04347
Name
(GenBank) mismatch repair ATPase Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DAPPUDRAFT_325677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpx03400
]
DAPPUDRAFT_325677
DNA repair and recombination proteins [BR:
dpx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
DAPPUDRAFT_325677
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-ProteinID:
EFX72912
JGI:
Dappu1_325677
UniProt:
E9H5Q5
LinkDB
All DBs
Position
Unknown
AA seq
915 aa
AA seq
DB search
MADSTNVPEIPHEQGFISFHGNLPEKLATTLRFFDRGEFFTLYGQDALLASRDYFKTHSV
VKMLGYGAKKLESVVFNKSHFENFARDVLLVKHYCIEIYNGSKSDWSLQYQASPGNLTQV
EDLIFGSTDITSQVGILAFKIGSENQIGCSYVDTYARKILVAQFSDNDAFSNLESLIVQL
SPKEVLIPHGEAYVAPKTMLNRHGLLVNENKKAEFSSTESVRLLNRLLRFKKGQQENAAA
LPEVSLDHSMAALAALVKHLDLMADETNFGQYSLQNFDFTQYMRLDSAASAALHLTSYGA
EVSTMVTSKAGAPRTIAALLNKCRTSGGQRLLAQWIKQPLTDKNRIDRRLDVVETFVNDV
QLRQTITEDHLRRMPDYQRLAKKLQKAKANLQDLYKLYLGLSRLPVLVDCLLENQGDHAA
VLIGVLIQPLRNANEKLVKLKEMVETTIDLNQADRGEFIIKADFDDQLGELKKDLDDCGS
RAEKVLSRAASDLKLETSKSVKLESNAQIGYYFRVTLKDEKNLRNNRNYHTIDTNKNGVR
FRNPDLAQVNETYLKVRQDYEQQQSSVVKEILSVAAGYVEPLQSLNDALSKLDVLTSFAV
CSISAPIPYVRPQILEKGSGSIELIQVRHPCMELQDGVNFIPNDAIFHKDGHRFYIITGP
NMGGKSTYLRSIGVAVLMAQIGCFVPALSATISIVDAILARVGAGDCHLKGVSTFMAEMI
ETANITRTATKDSLVIIDELGRGTSTFDGFGLAWAIAEHIAVKIQPYALFATHFHELTAL
ADEVPAVDNLHVTALTGDNTFTLLYRVQPGSCDQSFGLHVAELVHFPQEVLEIAQKKAKE
LEAIQPNNNESDSGEPTMKRRKGDNAEGDTLMRTYLERAKKIMEQKKDVNCEEMQELRKE
ITKTTDPFIRNVLNM
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggctgattctacaaatgtaccagaaatcccccacgaacaaggctttatcagtttccat
ggaaatcttccagagaaacttgccactaccctgcgattctttgatcgaggggaatttttt
accttgtatgggcaagatgcccttctcgcttcaagagattacttcaaaacacacagtgtc
gtcaagatgttggggtatggagctaagaagttggaatcggtggtcttcaacaaaagtcac
tttgagaactttgcacgtgatgtactgctagtcaagcactactgcattgaaatctacaat
ggatccaaaagcgactggtctctccaatatcaagcaagtcctggaaacctcacccaagtg
gaagatttgatttttggatcgactgacataacctctcaagttggtattctagcattcaaa
attggctcagaaaatcaaataggatgcagctacgtggatacttatgcaagaaagatactt
gtggcacagttttcagacaatgatgccttctcaaatttagaatctctcatcgtccaacta
agtccaaaggaggttttgatcccacatggtgaagcttacgttgcgccgaaaacaatgctg
aaccggcatggactgctagtaaatgaaaacaagaaagctgagttttcatccacagaatca
gttcgactacttaatcgactcttgcgcttcaaaaaaggacaacaagaaaacgcagctgcg
cttcctgaagtcagtttagatcattccatggcagctctggctgccctagtcaaacatcta
gatctaatggccgacgaaacaaactttggacagtacagtctacaaaactttgactttact
caatacatgagacttgattcggcagcatccgccgctctgcatcttacttcgtacggagct
gaggtctcgacaatggtgacgtccaaagctggagctcctcgtacaatcgctgccctgctc
aacaagtgtcgaacttcgggtgggcagcgactgttggctcagtggatcaaacaacctctt
acagataaaaacaggattgatagacgtctcgatgtcgtagaaacattcgtcaatgatgtc
cagctaagacaaacgataacagaggatcacctccgacggatgccggattaccaaagacta
gccaagaagttgcaaaaggctaaagccaacttacaagatctctacaagttgtacttgggc
ttgagtcgcttgccggtgctggtcgactgcttactggagaaccaaggggatcatgccgct
gttcttataggcgtgctcatccagccattacgaaatgcgaacgaaaagcttgtcaaattg
aaagagatggtagagacaactatagacctcaatcaagcagatcgaggcgagtttatcatc
aaggcagactttgacgaccaactaggagagctcaaaaaagacctagatgattgcggctcg
agagccgaaaaggtcctctcccgagcggcatccgatctcaagctggagacttccaagagc
gtcaaattggagagcaacgcacagatcggctattatttccgagtcaccctgaaggatgaa
aagaatcttcgcaacaaccgcaattaccatacaattgatactaataaaaatggcgttcga
ttccggaaccctgacttggcacaagtcaacgaaacttacttgaaagtgcgccaagattat
gagcaacaacaaagttcagttgttaaagagatcttatcagtcgctgctggatacgttgaa
cctctgcagtcgttgaacgatgccttgtcaaagctggatgtactgacaagtttcgccgta
tgttcaattagcgctccaattccgtacgtcagaccgcaaatcttggagaaaggatcgggg
agcattgaactaattcaagtcaggcatccgtgcatggaacttcaagacggagttaatttc
atacccaacgacgcaatttttcacaaagatgggcatcgtttctatattattaccgggccc
aatatgggtggaaagagcacctacttgcgttccatcggggtggctgtcctgatggcccaa
atcggctgtttcgttccagctctttcagccaccatttcaatcgttgatgccattttagct
cgagtcggagctggtgattgccatctcaaaggcgtatcaactttcatggctgaaatgatt
gagaccgccaacatcaccagaacagctacaaaggactctttggttatcattgacgaattg
ggaagaggaacttctacctttgatggatttggattagcttgggcaattgcagaacacatt
gctgtgaaaattcagccgtatgcgttgtttgccacgcactttcacgagctaactgctttg
gcggatgaagtgccggcagtggacaatcttcacgtaactgctttgaccggtgacaacacc
ttcacgttgttgtatcgcgtccagccaggctcttgcgatcaatcatttgggcttcacgtc
gctgaattggttcatttccctcaagaggttttggagattgcccaaaagaaggcgaaagag
ttggaagccatacagcctaataataacgaaagtgattcaggtgaaccgacaatgaaacgt
cgcaagggcgataacgcggaaggtgatacattgatgcggacgtatttggaacgtgccaaa
aaaataatggagcaaaagaaagatgtgaattgtgaagaaatgcaagaattgcgaaaagaa
ataacgaagaccacggacccgttcattcgaaatgtcttgaatatgtaa
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