Daphnia pulex (common water flea): DAPPUDRAFT_328137
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Entry
DAPPUDRAFT_328137 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
dpx
Daphnia pulex (common water flea)
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpx03019
]
DAPPUDRAFT_328137
03041 Spliceosome [BR:
dpx03041
]
DAPPUDRAFT_328137
03036 Chromosome and associated proteins [BR:
dpx03036
]
DAPPUDRAFT_328137
Enzymes [BR:
dpx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DAPPUDRAFT_328137
Messenger RNA biogenesis [BR:
dpx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
DAPPUDRAFT_328137
mRNA cycle factors
Common to processing body (P body) and stress granule
DAPPUDRAFT_328137
Spliceosome [BR:
dpx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
DAPPUDRAFT_328137
Chromosome and associated proteins [BR:
dpx03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
DAPPUDRAFT_328137
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
EFX70372
JGI:
Dappu1_328137
UniProt:
E9HD16
LinkDB
All DBs
Position
Unknown
AA seq
738 aa
AA seq
DB search
MSSVQIQNGTGLEQQFAGLDLKQQGGQFIAPGGSRYVPPHLRSTRDAGRGFTQATNSYRG
GSAQRGVPSTGGGYPRRGGFNGGGGGGSYAARPPQRWEGEYENGGGWNGGPQPPQWNADA
PPPVIQNERWQEPPPPAGQWVANDRWKEPQRRSATTDSRGGGYGGNARWKESSESDWTTL
TAKDDRLELEMFGTGNSGINFDKYEDIPVEATGNDVPAHINTFEDVKLTEIIRSNIALTR
YDKPTPVQKYAIPIILARRDVMACAQTGSGKTAAFLVPILNQLFERGPVVNQSAGQRSYG
RRKQYPLALVLAPTRELATQIYDEAKKFAYRSRVRPCVVYGGADVRQQMQDLERGCHLLV
ATPGRLVDMLERGKIGLEHCNFLVLDEADRMLDMGFEPQIRRIVEQDTMPKTGDRQTLMF
SATFPKEIQMLARDFLENYIFLAVGRVGSTSENITQKIVWVEEHDKRSFLLDLLNASGLN
KFNSQVETESTEHEQLTLVFVETKRGADALEEFLYRDGYPVTSIHGDRSQREREDALKRF
RSGKTPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNE
KNRNLIRDLVELIIETKQELPSWLEGMAMDIKHQSGGVSRRGGGGRGGGRFSGGFGSRDY
RTSTSGSGGSTRPGGSVGGPRTSGGGSYPNYSAPPPTHVVRMAPMPSMPIFTGGYGGYAP
SGYGYAPPHHSAPDWWGQ
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtgtacagattcagaatggaacgggtctagagcagcaatttgctggtctggac
ttgaagcagcaaggcggtcaatttattgctcctggaggaagtcgctatgtgcctcctcac
ctgagatctacccgagacgctgggaggggttttacccaagcaacaaattcctacagaggt
ggtagtgctcaacgtggagtgcccagcactggtggtggttaccccaggcggggaggattt
aatggaggtggtggtggtgggagctatgctgctcgacctccacagagatgggaaggagag
tatgaaaatggtggaggatggaatggaggtcctcagccaccacaatggaatgctgatgct
ccaccacctgtcattcaaaatgaacgttggcaagagcctcctcccccggccggtcaatgg
gttgccaacgatcgctggaaagaaccccaaaggcgctcggcgacaacggatagtcgcggc
ggtggttacggaggaaatgctcgctggaaagaatcgagtgaatctgattggaccacactt
actgccaaagacgatagacttgaattggaaatgtttggcacgggcaactccggtattaac
ttcgataaatatgaagatattcccgtggaggcgacgggcaatgacgtgccagctcacatc
aacacgtttgaagacgtgaagttgactgagatcattcgttcgaatatcgctttgactcgc
tatgacaagccaacgccagttcagaaatacgccattccgattattctggctcgacgagac
gtaatggcttgcgctcagacaggctcgggaaagaccgcagcattcttggttccgatattg
aaccaattatttgagcgtgggcccgttgtgaaccagtcagctggacaacgttcgtacgga
cgtcgcaagcagtatccgttggccttagttttagcacctactcgtgagttggccacacaa
atctacgacgaagccaagaagttcgcttaccgctctcgtgtccgcccatgcgtcgtttat
ggtggtgcggatgtccgccaacagatgcaggatttggaacggggatgccatttattggtt
gccacacccggacgtcttgtcgacatgttggaacgtggcaagattggcctcgagcactgc
aactttttggtgttggacgaagcagacagaatgttagacatgggtttcgaaccccaaatc
cgccgcattgttgaacaagatacgatgccgaaaactggagaccgtcagacgctcatgttc
tctgccacgtttcctaaggaaattcagatgctggcccgtgactttttggagaactacatt
ttcttggcagtcggtcgtgttggatctacttcagaaaacattacgcaaaagatcgtttgg
gtagaggaacacgacaagcgttctttccttctcgatctgctaaatgcttcgggtctcaat
aagttcaacagtcaagttgaaacagagtccactgagcatgagcagctgaccctggtgttc
gtcgagacaaagcgaggagccgacgctctggaggagttcttgtaccgcgacggctatcca
gtgacttccatccacggagatcgcagccaacgggagcgcgaagatgctcttaaacggttc
cgttcgggcaaaacacccattttggtggctacggccgttgctgctcgtggtcttgatatc
cctcacgtcaagcacgtcatcaattttgaccttccctctgacgttgaagaatacgttcat
cgaattggtcgtaccggacgtatgggcaatctcggtgttgcaacgtcgttctttaatgaa
aagaaccgcaatctcatccgcgatttagttgaactgattatcgaaacgaagcaagaactt
ccctcttggctcgaaggcatggccatggatatcaagcaccagtctggcggtgtaagtcgt
cgcggtggtggtggtcgtggcggaggacgattctctggcggattcggttcccgagattac
cgtacttctacatcgggcagcggcggcagcactcgtcctggcggctcggtcggtggtcca
cgcacaagcggcggtggatcctaccccaactacagcgctccacctccaactcacgtcgtt
cggatggcgcccatgccttctatgcccattttcacaggaggatatggcggttatgctcca
agtggttacggctacgcaccccctcatcactccgctccagattggtggggccagtag
DBGET
integrated database retrieval system
