Daphnia pulex (common water flea): DAPPUDRAFT_328232
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Entry
DAPPUDRAFT_328232 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DAPPUDRAFT_328232
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dpx01007
]
DAPPUDRAFT_328232
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dpx03016
]
DAPPUDRAFT_328232
Enzymes [BR:
dpx01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
DAPPUDRAFT_328232
Amino acid related enzymes [BR:
dpx01007
]
Aminoacyl-tRNA synthetase
Class I (U)
DAPPUDRAFT_328232
Transfer RNA biogenesis [BR:
dpx03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
DAPPUDRAFT_328232
Prokaryotic type
DAPPUDRAFT_328232
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
Phage_CI_repr
MTR4_beta-barrel
Fez1
Motif
Other DBs
NCBI-ProteinID:
EFX70267
JGI:
Dappu1_328232
UniProt:
E9HDC9
LinkDB
All DBs
Position
Unknown
AA seq
989 aa
AA seq
DB search
MWKRAPKQIFPLSYRSCATINLPKNVNSDMPKAYSPALVQGKWYEWWESNSFFKQHRPSS
CSEKFSMVLPPPNITGTLHIGHALTCAIQDSLVCWNRMNGKDTYWFPGCDHAGIATQAVV
EKNLKSQNLTREQLGRDKFVEEIWKWKHEKQDIIYQQLKGLGSTLNWDKAVFTMDPKLCY
AVNEAFIRLHQKGKIYRKESLVNWSCQLRSAISDIEVDHQSIDGPQGISVPGYDKPVTFG
YIYKFDYKLSDSDERIAVSTTRPETILGDMAIAVNPEDVRYSKYIGRSVIHPIRHDKLPI
IADSMVDQEFGTGAVKVTPAHDQKDYEIAVRHGIEMLSIFDNQGIANKNCSEFSGLPRFE
LREKMIQFLRDNNLLNSILPHQMSVPLCSRSGDVIEPLLRPQWFVDTQEMAQRAMEAVKS
GNLKMHPPHFENVWFEWLGNIRDWCISRQLWWGHRVPAYRFAGENDATWIAAHNFQQAVE
LAKHQNIPFSTVSQDEDVLDTWFSSSLFPFSVCGWPEQTIDLKNLFPLNLMETGHDILFF
WVARMVMMSLELTGELPFKEVLLHGIICDSQGRKMSKSLGNVIDPLDIVYGSSLKCLEDQ
LESSLKKGHLSSKEFEKAMTEKRVTFPDGIPQTGSDALRFTLCSYNVKSHFINLDMATLK
KNRLFCNKIWQATRFLFQILDETSPQKSSNDIYLRKDPIHSSLMNQWIMNGLDKMVSQVN
SAMSRYDFHHATDALYTFLYGSLCDVYLEAIKPLTGVDKQESAHVLAICLDVALRCLAPF
MPFLSEELYQRLHKKLADHGIQSPRSMSILIAKYPVKDEFALWKNAELEQNVDLILRVVT
ELRNVKVEYGLAKSKPEAILICSSENILSKSDQYSKLMATIGGLESVTICEERRLQNSKE
KVWVSRTVDSCSVHVNIAGIVDLRAELKKNQDKMRKLVDKLARIEANMNSTSYHLSAPSH
VQDIHRQKAESLRNEINSLKLYAQKLDEL
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaacgggcccctaaacaaatatttcccttatcatacagatcttgtgctacaata
aatttaccaaaaaatgtcaatagtgatatgccgaaagcttattcacctgccttagttcaa
ggaaagtggtatgaatggtgggaatctaactcattttttaagcagcataggccttcatca
tgcagtgaaaagttttccatggttcttcctccaccaaacataactggtactcttcatatt
ggacatgccttaacatgtgccattcaggattctctagtttgctggaatagaatgaatggg
aaagatacatactggtttccaggatgtgaccatgctggaatagctacacaagctgtagtt
gagaaaaatctgaaatctcaaaacctgacacgtgagcagctgggtcgtgacaaatttgtt
gaagaaatttggaagtggaagcatgaaaaacaagacatcatttatcagcagttaaaagga
ttaggttcaactttgaattgggacaaagcagtctttacaatggatccaaaactttgttat
gcagttaatgaagcatttattcgacttcaccaaaaagggaaaatttatcggaaggaaagc
ctagtgaattggtcttgtcagttgcgatctgccatttcagacatcgaagttgatcaccag
tcgattgatgggccacagggaatatccgtcccaggatatgataaaccagtcacgttcggg
tatatttataagtttgactacaaattgtctgattccgatgaacgtattgcggtgtccacg
actagaccagaaactattttgggtgatatggcaatcgcagtcaatcctgaagacgtacgc
tacagcaaatacatcggtagatcagttattcatccaattcgccacgataaattacctatt
attgctgattctatggttgatcaggaatttggaactggtgctgtaaaggttactccggca
catgatcaaaaagattatgaaatagcagtgcgtcatggtattgaaatgcttagcattttc
gacaatcagggaatagcaaataaaaactgcagcgaattcagcgggctacctcggtttgaa
ctgagggaaaagatgatacaattcttacgcgataataacttgttgaacagtattttacct
caccaaatgagtgtaccactgtgtagtcgatctggcgatgtaattgaaccccttttaaga
ccacagtggttcgttgacacacaagagatggcgcaaagagccatggaagcggtcaaaagt
ggcaatttaaaaatgcatcctcctcattttgaaaacgtctggtttgaatggctcggcaat
attagagattggtgcatctcgcgtcaactttggtggggtcatcgtgtacctgcatatcgt
tttgctggagaaaatgatgcaacttggatcgcagcgcataatttccagcaagctgtcgaa
ctcgccaaacatcaaaatattcccttttcaacagtcagtcaagatgaagacgtactcgat
acgtggttttcttcgtcgctctttcctttttcagtctgtggttggcctgaacaaacgatt
gatctcaaaaatttattcccacttaatttgatggaaacaggacacgacattctatttttc
tgggttgctcgtatggtaatgatgagtctggaactaaccggagagttaccattcaaggaa
gttcttttgcacggcatcatttgcgatagtcaagggcgcaaaatgtcaaaatctttgggg
aatgtgatcgatcccttggatatagtttatggttcatccctaaaatgcttggaagatcaa
ctggaatccagcctcaaaaaagggcatctttcttcaaaagaatttgaaaaggctatgaca
gaaaagagggttacatttcctgacggaataccacaaacaggttctgacgccttgagattt
actctttgctcctacaatgttaaaagtcattttattaacctggacatggcgactttaaag
aaaaaccgccttttttgcaacaaaatatggcaggctactcggtttttgtttcagattttg
gatgaaacttctccgcaaaaaagctcaaacgacatttatttgcgaaaggatccgatccat
tcgtccctcatgaatcaatggattatgaatggcctggataaaatggtcagccaagtcaac
agtgcaatgtcgagatacgatttccatcacgccacggatgcactctacacttttttgtat
gggagtctttgcgatgtttacctagaagctatcaaacctttaactggggtggataaacaa
gaatctgcccatgttcttgcaatttgcttagatgtggcacttcgctgtttggcccctttt
atgcctttccttagcgaagagctttatcagcgcctgcataagaaacttgccgatcatgga
atccaatcgccacgatccatgagcattcttattgctaaatatcccgtgaaagatgagttt
gctttatggaaaaatgccgagcttgaacaaaatgtcgatttaatcttgcgggtcgtcaca
gaattacgaaatgtgaaagtggagtacggattagccaagtcaaagccagaagccatcctc
atctgctcatccgagaatattttaagtaaaagcgatcagtattccaagcttatggcaact
attggtggactggaatctgtgactatttgtgaggagcggcgtctacaaaattcgaaagaa
aaagtctgggtatctcgtacagttgatagttgctctgtacatgtcaatattgcagggatc
gttgatctgcgagcggagcttaagaaaaatcaagataagatgaggaaacttgtcgataaa
cttgctcggatagaagctaatatgaactcaacttcataccacctgagtgccccatctcat
gtgcaagacattcaccgacaaaaagctgaatcgttgcgaaacgaaattaacagtttaaaa
ttatatgcccaaaagttagacgaactgtaa
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integrated database retrieval system
