Daphnia pulex (common water flea): DAPPUDRAFT_329057
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Entry
DAPPUDRAFT_329057 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
DAPPUDRAFT_329057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dpx03000
]
DAPPUDRAFT_329057
Transcription factors [BR:
dpx03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
DAPPUDRAFT_329057
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
PgaA_barrel
Motif
Other DBs
NCBI-ProteinID:
EFX69440
JGI:
Dappu1_329057
UniProt:
E9HFJ2
LinkDB
All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
MHQPIGSSPYSPESSHSSSSPISHSFSSGNSPMMCASPNSAYMGNSPSSIPIRPGRLSPC
LSILNQPQGKFRFRYASEMTGTHGCLMAESKERNKKEYIRVQLEGCQDREAIIRCTLVTN
SSKPVPHVHRLGGEGNSNGNNGNEGEYQEMIVSAGKNEWTATFSGLTIIHTAKKQVREVV
ERRLINELGNAPMNRNQGQQLKDEADKIANTMDLHSVKLKFEAFVEQNGFREQICPPQYS
QAIHNLKSTHAGDLRIVRIDKVYSCCTGQEEIFIFVEKVNKKDIKIRFFETDENEQEIWS
AFADFSELDVHHQYAIAFKTPAYQDPNIQSDVTVQFQLYRPSNQSTSEAKSFTYTPRERV
GMKRPRRDVPLNSDSNTNKRDYNATRTLPNNDPVAPNTFPSNCPSGDENGTPSFTSNFAD
QQRKCYESSVKH
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgcatcaaccaattggtagtagtccttactcacctgaatcatcacattcctcaagttct
ccgataagccacagcttctccagtggaaactctcctatgatgtgtgcctcaccaaacagt
gcctacatgggaaattctcccagttcaattcctatcagaccaggcaggctatccccatgt
ttatctatacttaatcaaccacaagggaagtttcgttttcgttatgcctctgaaatgact
ggaacacatggatgtcttatggcagaaagcaaggaacggaacaaaaaagaatatattcgt
gttcaattggaaggctgtcaagatcgagaagctattattcgttgtacattagttacaaac
agttcaaaacctgttccacatgtccatcgtcttggaggggaaggaaactccaatgggaac
aatgggaacgaaggagaataccaagaaatgatagtctccgctggtaaaaacgaatggact
gcgactttctccggtttaacaattatacacacagcgaaaaaacaagtccgtgaggtggtt
gaaaggcgtttgataaatgaactggggaatgcacccatgaatcgtaaccaagggcaacag
ttgaaggacgaagcagacaagatagccaatacaatggatcttcattcggttaaactaaag
tttgaggcctttgtggaacaaaacggttttcgtgaacagatctgcccacctcaatattcc
caagctattcacaatttaaaaagcactcatgctggagacttacgcatcgtccgaatagat
aaggtctatagttgttgtacgggacaggaagagattttcatcttcgtggagaaagtcaat
aaaaaggacatcaaaattcgtttcttcgagacagatgaaaacgagcaagaaatctggagt
gcatttgccgacttttctgaattggatgttcatcatcaatatgctatcgcattcaagact
cccgcttatcaagatccgaatattcaatcagatgtgactgttcagttccagttatatcgg
cccagcaatcaatctaccagtgaagccaaatctttcacctatactccaagagaaagagtt
ggtatgaagcgaccacgacgagatgttccgttaaactccgattctaataccaataaaaga
gattataatgcgacgcggacattaccgaataatgatcctgttgctcctaatacatttccc
tcaaattgcccttctggtgatgaaaatggaacaccaagctttacgtctaatttcgcagac
caacaaaggaaatgttatgaaagctcggtaaaacattaa
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