Daphnia pulex (common water flea): DAPPUDRAFT_329113
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Entry
DAPPUDRAFT_329113 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
dpx
Daphnia pulex (common water flea)
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dpx01002
]
DAPPUDRAFT_329113
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpx04121
]
DAPPUDRAFT_329113
Enzymes [BR:
dpx01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
DAPPUDRAFT_329113
Peptidases and inhibitors [BR:
dpx01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
DAPPUDRAFT_329113
Ubiquitin system [BR:
dpx04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
DAPPUDRAFT_329113
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
UCH
UCH_1
DUF3517
UCH_UBL1
UBA
UBA_7
UBA_RAD5A
ubiquitin
Motif
Other DBs
NCBI-ProteinID:
EFX69360
JGI:
Dappu1_329113
UniProt:
E9HFQ5
LinkDB
All DBs
Position
Unknown
AA seq
2727 aa
AA seq
DB search
MDVEDENISTLMAMGFPDIGEIKRALRLAKNDLNEAVAILTNDQSVSSYGPVADLNIDVD
MKEVAGVSKGSSEDASVSESGNDGFPETHLYELESRVFTDQWSIPYKKDESLHKCLAAAT
KLIEEGVWENDENMQRFLNKCMPEAFRKLLNSGAVQRWNSEIQKGIYNMLELFIDLLVVR
MKHKPVPVQMLNQVFSLACDLDCEWNCKNKGQQSEEKHWEDLFGPGEIFARSPENFNQDP
YGWLVDLLNHFGAKNGFGMMQDSFEEDLDPVSMAAILRPLGNCAELLNPSAVCPMLTKCV
EYAVNHVTTIEDKDLKNKDIGAVLELLVALKLLCKCLWPDLADRMNNIRLEVILRMLKTP
HFSTRMNALKEVSKLVEEAESTSPKKSSIPGDQLAEWLSDHQVLSVALEGNIDHVQYTDR
IKGLVEFLGPRLSSDELSQIWAMGEKSFHVVDNLHGVLAAAAPKLAPAQLDHLLLLVQEK
WQRNSNDRMREKLLSFLGQLGKECRVSKTGSKILETLWDLARYTGLPCHLVERALDEHLS
VLAEIPNKEQLRKTYVLRCIDDLKKGNQGTLPLLRHLLNVARSMVKGSGTYHKPDKTALA
EWNTNHEIVKLLLVSLGKCHSQAVASAKVLSQSLTQETIVDRYGYRHGQLIQAHLDLLQL
LLKEADLYLPWARCKELWDTLVTNPDACEADRECCFQWFASCLGDMQPDTQSALFREKIL
KSNPAQLTLRGFECVQTFFESVNVSDGKMRRFGTQAMVEKLDPIGTDYFWQVALESPNED
LAKEAMGHILDISYLHLAPRMKKDPATLHKKFINDCYKRLETQVPCSKATSSNTPAISLV
QLSSLTPDKKSGCLQHIRRLLELVEKYISVIEETHPAPRTILPHGLSFKGEPIGLHIKTE
DSKTDIDLLVHSHETVWAVKQKIASLLRLNAEQITLVIGDRPSPLGREQKSLSQLGCTDK
QTWVVKSTSGAGAVSGGAQLTELKENWDELPNTPSPVVGASPSDTVETEMEEASSLSTSN
TSAARMSFHIEQERSLPGIVMANGGQVFTMLYQLSEIDDLKIQETIRRLLHLIPTDPAVV
EVLEKVASRRSAASAFSTAASFDVDLRPRPSVGSLNALSASNTASTSPFARATAPTVVGH
AAIATSPTKSIPSLSISHKPSGLASNIRSASFRRAPQQLSVADKNDSKESVEDMLRGLLN
PTAPLMSPFRVLYNLEVLSGRLMPTFFDTTTLNKTNVFKQEFLLACGLNFVSRVLRKDYF
SQDVNYEIRQGCCLIALQLARFLLCGEVDEAASSMAMKTQMTPSKLQLTPTKMTPTKISP
IRQTTPIKIQLSPVKLQSVTTSLSFSCSPVKEISLETAKAALQVLQTLSEAEFLDMISCF
VRVCWAAAAGKLYLAAAPGSSPLPNKDGGGQSIDSGTGSNISVASSLLNPGRRSRQSSTG
STSSSSSCGDTDTAGLYFGICASNKELCSKDVLIACEALELLITCLEVRGTKELAAFFSF
PYVKDFIIDILLGCASSEVRDKASALFFRLSQAQSQSSKHPLTQILVKAPVPLWITSCTT
RGASQRLLSQCSQYFNLRCRLLSSLTVADQRSLGLVAVSMLNDEVGWLSNFTPYSGTSSI
EMEQADNALLAGHLNVVRGLLNCDGVNRKEAGKLLIPDLLNQYLFPASKLIAEGLKRASF
LSTPTNINPKCSQSESRLAAYALIIELVVECKENLEAVVKQLISMHHRFNPDLAKEFEFE
PAVEGRAACNFVGLKNAGATCYMNSVIQQLYLIPGIKESILAIDDEDSDEDTLFFQFQMV
MGHLQDSKLQYYVPEKFWRCLRLRGQPVNVREQQDSFEFFTHLADSIDEHLFRNEREKLF
QNTLGGVFSDQMICKECPHRYEREQIFLALNLTVKSHNLLDSLEQFVKGELLEGDNAYFC
EECGVKRNTVKRMCIKTLPSTLVIQLKRFYYDWDAGRSLKFDDYFQFPWELDMAPYTSEG
IQERERTDSPGVDVTSATTSKNRNSLTLKSTRMSSSNYELVGVVVHSGQASAGHYYSFIK
ERKRSEDRSGRNRWLKFNDTTVEEFDMNDTTLEAECFGGTYKAKSYDTTNGFPETRQRYW
NGYILFYDRIEDPMKTPRTPRKGTSSSGANSSIVTRSRSFRAAGSLSSTPNKLSSASIGS
VPQRDSLSQLSELLNHGERQGLFGGKMPAQVQQAVREENLRFLKSRDVYCPDYYEFIYEL
CQANATKKTASNSCAVPSVNLALHFLCHTYLRIRAKESSRLSSWVDLINSYTSSYKECSM
WAIDFWSGEEGTKHIRSFLLECPSRNVRHQFSKILENSLSSFFSHGGETNQPCLIKLLES
LLSMLDKDVPDNCKTCSQFFYLLSAYANMGVDQCQHLFQLGAFRKLLVFLLGADRVGFNP
PSPVLSPRENNSKPTPTGQKSLAIPLPAPSPTSTLQRRWSQTQAKDFHDLHTTLATMILH
CDLQAQNSSITACDNTGRLPTPPEVTSVLYGQSSVFYFQELVVACCHLNNISGESSLIRM
LLYIARGQLDFSRTLLRETLHQCAVVSASELKNLAQLLQEILVLEDGLQFNRLQCVIDGF
TDKDGQSVEGVLALIQSQQSNDSRRAYQLMKFLVSLANRLQIAKDYLLQSPCKWQWSVNW
LKQKIEQSYWSPHADLSNENSNTRIFQRTTSAQVTLEEATALLTEFESSDMETETDLDFG
LAQSIETDETSTTQESKSKCRFSLGPS
NT seq
8184 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcgaagacgaaaatatcagcacgttaatggccatgggatttccggacatcgga
gaaatcaaacgagctttacgtttagccaagaatgatctaaatgaagcagttgctatcctc
accaatgatcagtcagtgtcatcttatggacctgttgctgacttaaacatcgatgttgac
atgaaagaggtagctggtgtttccaaaggatccagcgaagatgcttccgtgtctgaaagt
ggaaatgatggcttccctgaaacccacctgtatgaattagagtctagagtatttacagat
caatggtctattccttataaaaaggatgaaagtttacataaatgcttagcagctgcgaca
aaactaatagaagaaggtgtttgggagaatgatgaaaacatgcagaggtttttgaataaa
tgcatgccagaggcattcagaaagttattaaattctggagcagtgcagaggtggaactct
gaaattcaaaaaggaatctataatatgctggagctattcatagatcttcttgttgttcgc
atgaagcacaaaccagttcctgttcaaatgcttaaccaggtattctcacttgcctgtgat
ttagactgtgaatggaattgcaagaataaaggacaacagagtgaggaaaaacactgggaa
gatttgtttggaccaggtgaaatatttgcaaggtcgccggaaaattttaatcaggatcca
tatggttggcttgtggaccttttgaatcattttggagccaaaaatggattcggcatgatg
caagatagttttgaagaagatcttgatccagtttccatggctgcgatattaagaccatta
ggaaactgtgccgaattgttaaatccatctgctgtgtgtcccatgcttacaaaatgtgtg
gagtatgctgttaatcatgttacgacgattgaagataaagatttaaaaaacaaggatatc
ggagctgtccttgaactactagttgcgctaaagttactctgcaaatgtttatggcctgac
cttgctgacagaatgaacaacattcgccttgaggtgatcctacgcatgctgaaaacacct
cattttagcacacgaatgaatgctctgaaagaagtttcaaagttagtggaggaagctgaa
tccacgtcgccaaagaaatcttctattccaggagaccagctggcagaatggttgtctgat
catcaggtgttgtcggttgctctggaaggcaatattgaccacgtacagtacaccgatcgg
attaaaggtcttgtcgaatttttgggtccacgcctaagctcggatgagttgagtcaaatc
tgggccatgggagaaaaaagttttcatgtcgtggataatttacatggtgttcttgccgct
gctgctcccaaacttgccccggctcagttggatcatttgttgctgctcgttcaagagaaa
tggcagcgcaattccaacgatcgaatgagagaaaaattactcagctttcttggccagctt
ggtaaagaatgccgagtatctaaaacgggttcaaagatattggaaacattatgggattta
gcccgctataccggacttccatgtcacttagttgagagagcactcgatgagcatttgagt
gtgttggctgaaataccgaacaaagagcaattaagaaaaacatatgttttgcgctgcata
gacgatttgaagaaaggaaatcagggtacactcccactgcttcgtcatttgttgaatgtt
gctcggagcatggtaaaagggagtgggacttaccacaaacctgacaaaactgctttagca
gagtggaacactaatcacgaaattgttaaactattgctagtttcacttggaaagtgccat
tctcaggcagttgcttcagctaaagttttgtctcagtccttaacccaagagacgattgtg
gatagatatgggtatcgacatggacagcttattcaagctcaccttgatttgttgcaattg
ctattgaaggaagctgacttataccttccgtgggctaggtgcaaggaattgtgggacact
cttgtgacaaacccagatgcatgtgaagctgacagagagtgttgttttcaatggtttgca
tcgtgcttgggagacatgcagcctgatacgcaaagtgctcttttccgcgaaaaaattttg
aagagtaaccctgcccaactcactctgagaggttttgagtgtgttcaaactttctttgaa
tccgtgaatgtgtcggatggcaaaatgcgaagatttggaacacaagcgatggttgaaaaa
ttggaccctattggcactgactatttttggcaagtagctttggagtctccaaatgaagac
ttagcaaaagaagccatgggacatattttagatatctcgtatttacatcttgctccccgg
atgaaaaaggatcctgcgactttgcataaaaagtttattaatgattgctataagcgatta
gagacccaagttccatgttccaaagccacatcttcaaatacgcctgcaatttctcttgtt
cagctgtcgtcgttgacacccgacaaaaaatctggttgtcttcagcacatcaggcggttg
ttagaacttgtcgaaaaatatataagtgtcatagaagaaacccatccagctccaagaaca
attttgcctcatggactatcatttaaaggagaaccaataggattacacataaaaacggaa
gattccaagacggacatcgatttactggttcatagtcacgaaacggtatgggctgtcaaa
caaaagatagcatcgcttctacgcctcaacgccgaacaaattactttggtcataggcgat
cgcccttctcctctaggtcgagaacaaaagtcattgagtcaactcggttgtacggacaag
caaacttgggttgttaaatcaacgtctggggctggggctgtgtctggtggtgcgcagcta
actgagttgaaagaaaattgggatgaattgccaaacactccatcacccgttgttggagcc
tctccgtcagatacggttgaaaccgaaatggaagaggcttccagccttagcacatcgaat
acgtccgctgctcgaatgtctttccacattgaacaggagcgatccttgcctggcattgtt
atggctaacggtggccaagtctttaccatgctttatcaactttcggaaattgatgatctg
aagattcaagaaactattcgaaggctattacatttgattccgacggatcctgcagtcgta
gaagttctggaaaaagttgcctcgagacgatctgctgcgtctgcgttttcgaccgctgct
tcgtttgacgttgatctacgtccacggccttcggttggaagtttaaatgctctcagtgcc
agtaatactgcttcaacatcaccatttgcacgtgctactgcacccacagttgttggccat
gcagctattgcgacatcaccgacgaaaagcataccctcactttctatttctcataagcca
agtgggttagctagtaatatacgctctgcaagctttcgccgtgcgccacaacaactttca
gttgccgataagaacgattctaaggaatctgtggaggacatgctcagaggattactgaat
ccaacagctccactcatgtctcctttccgtgtactttataatcttgaggttttgtctgga
cgattaatgccaacatttttcgacacaactaccctgaacaagactaacgtcttcaagcaa
gaatttctattggcttgtggactaaacttcgtgtctcgagttcttcgcaaggattatttt
tcgcaagatgtcaactatgaaatccgacaaggatgctgcttgattgctcttcagctggcc
cgctttttgttgtgtggtgaagttgatgaagcagcttcaagtatggcaatgaaaacccaa
atgactccttccaagttgcagttaacgccaacgaaaatgacgcctacgaaaatttcacct
attcgtcagactacgcctattaaaattcaactttctcctgtaaagctgcaatccgtcacc
acttccttgagcttttcgtgtagccccgtcaaagaaatttctttggaaacggcaaaagca
gccttgcaagtattgcaaaccttgagcgaagctgaatttcttgatatgatttcctgcttc
gttcgcgtatgctgggcagccgctgcaggaaagttatacctcgccgccgcacctgggtca
tcacctttgccgaacaaggacggtggtggtcagtcgattgatagtggcactggcagcaat
atcagcgtcgcatcatctctactcaatcccggcagacgaagtcgtcagagtagtacgggt
agcacaagtagcagtagcagttgcggcgataccgatactgccggtctgtactttgggatt
tgcgcttccaacaaagaactctgcagcaaagatgttctcatcgcctgtgaagctcttgag
ttgctgattacttgtctagaggtgcgagggacaaaagagctcgcagcctttttttccttt
ccctatgttaaagatttcatcatagatatacttcttggttgtgccagttcagaagtgcga
gacaaagcttctgctctgttttttagacttagccaagcacaaagtcagtccagtaaacat
ccactaactcagattttagtcaaagctccagtcccactatggataacatcgtgtacaacg
cgaggggcatcgcagcgactattatcgcagtgcagtcaatatttcaatttgcggtgtcga
ctcttgtcgtcactgacggtagctgatcagcgcagtttaggactagtggctgtatctatg
ctaaacgatgaagttggatggctgtccaatttcactccgtacagtggaacttcatcgatc
gagatggagcaagccgacaatgccttgctagctggtcatttaaatgtggtgagaggactc
ctcaactgtgatggtgtaaaccgaaaagaagcagggaaactattaataccagaccttctt
aatcaatatctctttccggcatcaaaattaattgccgaaggattaaaacgtgctagtttc
ttgtctactccaacaaatattaatcctaaatgcagtcaatcggaatcgcgtcttgctgca
tatgcattgatcattgagttggttgttgaatgtaaggagaatcttgaagctgtggtcaaa
caactgatatccatgcaccatcgattcaacccagatttggctaaagaatttgagtttgaa
ccagcagtggaaggtcgagcggcctgtaatttcgtggggttaaaaaatgcaggtgcaact
tgctatatgaactctgtaatccagcagttatatctcatcccaggcatcaaagagagcatt
ttggcaatcgacgatgaagattcggacgaagacacgcttttcttccagtttcaaatggtc
atgggacacttacaggattccaaacttcagtactatgtcccagagaagttctggcgttgc
ttacgccttcgaggccaacctgtcaatgttcgtgaacaacaagactcttttgagtttttc
acacacttggctgatagtattgacgaacatcttttcagaaatgagcgtgaaaaacttttt
caaaacactcttggtggcgtttttagcgatcaaatgatttgcaaagaatgtccacatcgc
tacgaaagagagcaaattttccttgctctcaatctgacagtgaaaagtcacaatcttctt
gattcactggagcagtttgttaaaggagaacttttagaaggagataatgcttatttctgt
gaagagtgcggcgtaaagagaaatacagttaaacgcatgtgcatcaagacattgccttca
accttggttattcagctgaagcgcttctactacgattgggatgcaggaaggtcactcaag
ttcgatgactactttcaatttccatgggaattggatatggcaccgtacacgtcagaaggc
attcaagagcgagaacgaaccgacagtcctggtgttgatgttacttcagcaactacatct
aaaaatcgcaatagtttgactttaaagagtacgcgtatgtcttcaagcaattacgagctt
gttggtgtcgttgtacacagtggacaagccagcgctggacactactactcctttattaaa
gaaagaaaacgttcggaagatcgttccggtcgtaatcgatggctgaaattcaatgataca
accgttgaggaattcgatatgaatgatacaactcttgaagctgaatgcttcggtggaact
tacaaagcaaagagttatgatacaacgaatggatttcccgaaacacgacagcgatattgg
aacggctatattctgttttatgacagaatcgaagatcccatgaaaactccacggactcct
cgtaagggaacaagcagctctggagcaaattctagcattgtgacaagaagccgatctttc
cgagcagcaggatccctatcatctacgcctaacaaactttcatcagcttcgattggatct
gttccgcaacgtgacagtttaagccaattgtctgaattgctgaaccacggtgaaaggcaa
ggcctttttggaggaaaaatgcccgcccaagtgcaacaagcagtgagagaagaaaatctt
cgttttttgaaatctcgggacgtttactgcccggactactatgaatttatctacgaattg
tgtcaagccaatgcaaccaagaagactgcatccaattcatgtgcagtaccatctgtaaat
cttgcccttcactttttgtgccacacttatttacgaattcgagctaaagaatccagccgg
ctctcttcttgggtcgacctaatcaatagctacacatcatcttacaaagagtgttcaatg
tgggccattgatttttggtcaggggaagaaggaactaagcatattagatcctttctgctg
gagtgtccttctcgaaatgtacgccaccagttttcaaagatattggaaaattcgttgtcg
agtttttttagtcatggaggggaaacgaatcaaccgtgtctaataaaattactggaatcg
ttgctgtccatgttggataaagatgtccctgataattgcaaaacatgctcgcaatttttt
tatcttctatcagcttatgcaaatatgggtgttgaccagtgtcaacatttatttcaactt
ggtgctttccgtaagctcctagtgtttctgctgggagcagacagagtcggattcaatcct
ccatcaccagttttatccccccgagaaaataattcgaagccaacaccaaccgggcaaaaa
agtcttgccatacctttgccagcaccttcccctacctctacactgcaaagaaggtggagt
caaacgcaggcaaaggatttccatgatctccatacaacactggcaacaatgatccttcat
tgcgatttgcaagcccaaaattccagcatcacagcctgtgacaatactggtaggcttcct
acaccaccggaagtaacttcagtgctgtatggacaaagttccgtattttactttcaggaa
ttagtcgttgcgtgttgccatttaaataacataagtggtgaatcatcattgatccgaatg
ctgttgtatattgctcggggacagctggatttctcgcggactctgcttcgtgaaacattg
caccagtgtgcggttgtttcggctagtgaattgaaaaatttggcgcaacttctccaagaa
attttggttttggaggatggtctgcagtttaaccgacttcagtgcgttattgatggtttt
actgacaaggacggccagtctgttgaaggcgttttagccttaatacaatcgcaacaaagc
aacgacagcaggcgggcctatcagctaatgaaatttttagttagtcttgcaaatcgcctt
caaattgcaaaagattacctgttgcaatcaccatgcaagtggcagtggtcagtcaattgg
ttgaagcaaaagattgagcaaagctactggtcaccccacgctgatcttagcaatgagaat
tccaacacacgaatatttcaacgaacaacatctgctcaggttacattggaagaggctaca
gcacttctgaccgagtttgaatcgtcggacatggaaaccgaaacggatcttgattttggg
ttagcgcagtctattgaaactgatgagacatctactacccaagaatctaaatcaaagtgt
cgttttagcttaggtccctcttga
DBGET
integrated database retrieval system
