Daphnia pulex (common water flea): DAPPUDRAFT_329118
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Entry
DAPPUDRAFT_329118 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K12821
pre-mRNA-processing factor 40
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DAPPUDRAFT_329118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpx03041
]
DAPPUDRAFT_329118
Spliceosome [BR:
dpx03041
]
Complex A
U1 snRNP components
U1 related factors
DAPPUDRAFT_329118
Complex B
DAPPUDRAFT_329118
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
Spherulin4
WW_2
Motif
Other DBs
NCBI-ProteinID:
EFX69363
JGI:
Dappu1_329118
UniProt:
E9HFR0
LinkDB
All DBs
Position
Unknown
AA seq
815 aa
AA seq
DB search
MSGSGTSSSMSAPVVPSGSFPSALPPYGIPPPGFIPPTPGIPPPFGVAMPSMAPPSVFGV
PPFGASAVPPSGFFPQTMPAQGSIENENKRTWTEHKSPDGRTYYYNNLTKQSLWDKPDEL
KTAAEIMLSQCPWKEYKTEDGKIYYHNVSTKESSWTIPPELGELKSKIATEESNKTTIAN
GQTGTDILSSTVQISTAAMTVSQSVVTDSLPTPTRAPISALDQAMAATLAAITVPSPQTE
DSMDAKPSPSSDSRTSTPEPKTTFKDKREALEAFKELLREKNVPSNASWDQALKYIQRDP
RLAALGKLTERKQAFHAYKTQKQKEEKEEQRLKAKKAKEDLEAFLLVDSSISSTTKYFRC
EEIYGNLEVWKNVPEGERRDIYEDAIFHLSKREKEEEKALRKRNMKNLTRVLDSITDITH
RTAWTEAQQLLLDNPSFAEDNDLLAMDKEDALVVFEQHIRELEHEEEEERERGKRRIKRL
QRKNRDSFLNLLDELHENGKLTSMSLWVELYPIISTDLRFSAMLGQPGSNPLDLFKFYIE
DLKSRFHDEKKIIKEILKQKSFEVDIKTTFEDFATVVCEDKRSVILDGGNVKLTYNALLE
KAEVREKERLKEENRRSKKLESAFRNLLRAKELDHLVSWEDSVSKLEGDPAFDAITEESD
RIRIFKEYQRDMEETCGHHHSRSKKNKKKEKKQKRRSSSSRSPSTTRSGSRSKSRSKSPS
RSKSDENEAKLVDEELPSTHKKSKKKKSKKKKERSRSPSSDSEENRTKEKKKDKEKKSRN
DSGNDKKNKEDGEWSEDELERRRRLLLEQLAEEHQ
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaagtggaacttcatctagcatgtcagcaccagtagtaccatcaggatctttt
ccatcagctttacctccatatggaatacctcctccaggtttcatacctccaactcctgga
attcctccaccatttggggtggcaatgccaagcatggcgcccccttctgtatttggtgta
ccaccctttggtgcttctgcagtcccaccctcaggttttttccctcaaactatgcctgca
caaggaagtatcgaaaatgaaaacaagcgcacctggactgaacataaatccccagatgga
agaacatactactacaacaacttaactaagcagagtttgtgggataaaccagatgagctt
aagactgcagctgagataatgctttcacaatgtccatggaaagaatataaaactgaggat
ggaaaaatttactaccacaatgtttctactaaagaatcaagttggaccattccaccagaa
cttggagagctaaaaagtaaaattgcaactgaagagtcaaataagacaacaatagcaaat
ggccaaaccgggactgacattttatcatcaacagttcaaataagtacggcagctatgaca
gtgtctcagtcggttgtcacggatagcttaccaactccaacgcgtgctccaatatcagct
cttgatcaagcaatggcggcaacattggctgcaataaccgtaccatctccacaaactgaa
gatagtatggatgccaaacctagtcctagcagtgacagtagaactagtactccagaacca
aaaacaacctttaaagacaaaagagaggcattagaggcatttaaagagctgttaagggaa
aagaatgtaccaagtaatgccagctgggatcaggctctaaaatacattcaacgagatcct
cgattggctgcattgggaaaattaactgagcggaaacaggcattccatgcttacaagacc
caaaaacagaaagaagaaaaagaagaacaaaggctaaaagccaagaaagccaaagaggat
ttagaagcttttcttcttgtagactcaagtatcagttcaactaccaagtactttcgttgt
gaagaaatctatgggaaccttgaggtatggaagaacgttccagaaggtgaacgtcgagac
atttatgaagatgccatttttcacttgagtaaaagggagaaagaagaggaaaaagccctg
cgtaaacgtaatatgaaaaatttaacccgagtgttagattctatcaccgatattacccac
agaacggcatggactgaagctcaacaacttctgcttgataatcctagctttgcagaagac
aacgacctattagcgatggataaagaagacgctttagttgtttttgaacaacatattcgt
gaattagagcatgaagaagaggaagaaagggagagaggtaaacgaagaattaaacgtcta
caacgtaaaaaccgagattctttccttaatctgcttgatgaactacatgaaaatggcaaa
ttaacttcaatgtctttatgggtcgaactatatccaataataagcaccgacctacgattc
tctgctatgctagggcagccaggttcgaatccacttgacttgtttaagttttatattgaa
gacttgaaatctcgatttcacgacgaaaagaagatcattaaggagattcttaagcaaaaa
tcgttcgaagttgatatcaaaacaacatttgaagactttgctactgtggtgtgtgaagat
aaacgatcagtaattttggatggcggcaatgttaaattaacttacaacgctttacttgag
aaggctgaagttcgggagaaagaaaggttaaaggaagagaaccgacgttcaaagaaattg
gaaagtgcatttcgaaatcttcttagagctaaagaattggatcatttagttagttgggaa
gattccgtatcaaaattggaaggagatcctgcatttgatgcgattactgaggagtccgat
cgtattcgtatatttaaggagtatcaacgtgacatggaagagacatgtggccaccatcat
tcgagatctaaaaaaaataagaagaaagaaaagaaacaaaaaagacgatcctcatcttcg
aggtcaccttccaccacaagatcgggttccaggtcaaaatcgcgatccaaatctccttcc
cgatctaaatctgatgaaaatgaagcgaagctcgttgatgaagaactaccatctactcat
aagaaaagcaagaaaaagaagagcaaaaagaagaaagaacgtagtcgttcgccgtcgtca
gattccgaagagaatcggacaaaggaaaagaagaaggataaagaaaaaaaaagcagaaat
gacagcggtaatgataagaagaataaagaagacggtgagtggagtgaggatgaactagaa
cgaagaaggcgactcctgttggaacaactggcggaagaacatcagtga
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