Daphnia pulex (common water flea): DAPPUDRAFT_329548
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Entry
DAPPUDRAFT_329548 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K14323
protein CASC3
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03013
Nucleocytoplasmic transport
dpx03015
mRNA surveillance pathway
dpx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DAPPUDRAFT_329548
09122 Translation
03013 Nucleocytoplasmic transport
DAPPUDRAFT_329548
03015 mRNA surveillance pathway
DAPPUDRAFT_329548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpx03019
]
DAPPUDRAFT_329548
Messenger RNA biogenesis [BR:
dpx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
DAPPUDRAFT_329548
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-ProteinID:
EFX69037
JGI:
Dappu1_329548
UniProt:
E9HGX7
LinkDB
All DBs
Position
Unknown
AA seq
495 aa
AA seq
DB search
MADDDSRRGVTSVADADSAEQSTNSGDNPQAESKAVTDDVAVASQPTEETPEEKTIQDAP
KASAEVITSATRDSEETKNRLAKAREELNKAREESARARDEVEKAKKDLAVAKQDTSSTI
QVAVEKPSAEVNVAASESTPKVETEIEKPSKAEEAPAVTEHVEDSKIEDKPEVQPETPKE
EKLVPEDSKNSNQNCEATEPKEEVGEDKPVTAHESQSAVETKTVEEEAKVEDTVTADNSN
ATKEIQVESNKEVETPVGATEEVQEESHVEEKQPESSKDEEESDDEDAPAKPLDDDEDRR
NPQYIPKRGGFYEHDDRNREEVEEAAAEEPVAGVEVEKPKKTRSEAIDRWGHDMFDPNQQ
VPKSDQELVDLYGYDIRQEEGAPRARRRRRYGRGPNKYDRTWEDEDAYSRPRGRGGVASR
GGPSERGSGFERNPDSRPRTQRQEMPKKDEFPALSDGKQEPKAQVETAPKQLTVRRTLFL
IDVEEADGHSKSVEK
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgacgacagcaggcgtggtgttaccagtgtggcagatgccgactcggctgag
caaagcactaacagcggtgacaatccacaggctgaatcaaaagcggtgacagatgacgtt
gcagttgccagtcaacccactgaggagacaccagaagaaaagacaattcaagatgccccc
aaagcttctgcagaggtgatcacgtctgccacaagagattcagaagaaaccaagaatcga
ttggccaaggccagagaagagcttaataaagcaagggaggaatcggctagagctagggat
gaagttgaaaaagcaaaaaaagatcttgctgtggctaagcaggacacctcatcaacaatc
caagttgcagttgaaaagccatcagcagaagtcaatgttgctgcttcagaatccaccccg
aaagttgaaacagaaatagaaaagcctagtaaagcggaagaagctccagctgtcactgaa
catgttgaggacagcaagatagaggacaaaccagaagtacaaccagaaacccctaaagaa
gaaaagctggtacccgaagattccaaaaactcaaatcaaaattgtgaagctactgaacca
aaggaggaagttggagaagataaacctgtcacagcccatgaatctcagtcagcagtagaa
actaaaacagtcgaagaggaagctaaggtagaagacacagttactgctgacaattcaaat
gcaaccaaggaaattcaagtagagagtaacaaagaggtggaaacaccagttggagcaaca
gaggaagtgcaggaagagtctcatgtggaagaaaaacaacctgaaagcagtaaagacgaa
gaagaaagtgacgacgaagatgctccagccaagccattagatgatgatgaagaccgtcga
aaccctcaatatattccgaaaagaggtggcttttatgaacacgatgaccgaaatcgcgaa
gaagttgaagaggcagctgctgaagagcctgtagccggagtagaggtggaaaaaccgaag
aagacgagaagtgaagccatcgatcgttggggtcatgatatgtttgatccaaatcagcaa
gtgcccaagagtgatcaagagttggttgatctctacggatacgacattcgccaggaagaa
ggagctccgagagcgcgccgtcgcagacgttatggtcgtggtcctaacaagtacgatcgt
acatgggaagatgaagatgcttattctcggcctcgcggacgaggtggtgtcgcctcaaga
ggtggtccctcagaacgtggctctggatttgaacgcaatcccgattcccgtccgcgcacg
cagcgccaagaaatgcccaagaaggatgaattccccgcattatcggatggcaaacaggag
cccaaggcccaggtagagactgccccaaagcaattaacagtaaggcgaacgctgtttctt
atcgacgtggaggaggcggacggacattcgaagagcgtcgagaaatga
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