Daphnia pulex (common water flea): DAPPUDRAFT_335094
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Entry
DAPPUDRAFT_335094 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
dpx
Daphnia pulex (common water flea)
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpx03041
]
DAPPUDRAFT_335094
Enzymes [BR:
dpx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
DAPPUDRAFT_335094
Spliceosome [BR:
dpx03041
]
Complex C
Other components
Complex C specific factors
DAPPUDRAFT_335094
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
Cas3-like_C_2
DUF6798
Motif
Other DBs
NCBI-ProteinID:
EFX63709
JGI:
Dappu1_335094
UniProt:
E9HX17
LinkDB
All DBs
Position
Unknown
AA seq
522 aa
AA seq
DB search
RSLNTDILLSLLKKICKKRPELRLVISSATLDAEELKNYFELNKNKKSYLERSTPAQYQV
GSSVIMNVVGRCYPVDIFYAQDPVPDYLKASVDTVIKISIREPSGDVLVFLTGYEEVETA
VRLLKEHSNTIADSANIDKLSVLAMHGGLSNEDQLQVFQRSPPGRRKIVVATNVAEASIT
IPGIAYVIDCGFVKLKWFNADTQTDALVVVPISQASAQQRAGRAGRIRAGKVYRLYTEDY
FYTLNRFTPPEVQRSNLSSAVLQLKALGVDDVIHFDFPSPPPARHLAIALELLFALKAID
TSGRLTDAGLNIAEFPVEPIMSKMLLSSKDFKCSMEIATIVAAMQVQALFYYPTRGQESI
KARVARRKFDAQEGDLITYLNVVSAFAKHGECSRWCQSNYLNKKSLKRVVLLRDQLIKLL
QRLGIRISSAEGELEPVLRCIASSFFPNTAYLHPSGQYKTVLADIVLQIHPHSILFTEEK
APWVVFGEVLQTTQLFMRDITVIDQIWLEELAPHYFQKVTER
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
agatccttaaacactgatatacttcttagtttgttaaagaaaatctgtaagaaacggccc
gaactgcgtcttgttatatcttctgccactttggacgctgaagagctaaaaaactacttt
gaactgaacaagaataaaaaatcttatttggaaagatctaccccggctcaatatcaagtg
gggtcttcagttatcatgaatgttgttggcaggtgttatcctgttgacattttttatgct
caagatccggttcctgattacttaaaagctagtgtcgacactgttattaaaatatcaatt
cgggaaccttcgggtgatgtattagtttttctaactggctatgaggaagtggaaactgcg
gtgcgacttttaaaagaacattcaaacacaatagctgattccgcaaacatagataaattg
tctgttttagcgatgcatggaggattatcgaatgaagatcagttacaagtgtttcaacgt
tctccacccggaagaagaaaaattgtggttgcgacaaacgtagctgaggcttctattact
atccctggaattgcttatgtcatcgattgtggctttgtgaaattgaagtggttcaacgcg
gatactcagaccgatgctctagttgttgttcccatttctcaagcttctgcccaacaacga
gctggaagagctgggcggattagagctggaaaagtctaccggctgtacactgaagattat
ttttacactctgaatcgatttacaccaccggaagtgcaacgaagtaatttgtcatccgca
gttttgcaattaaaagctctaggtgttgacgatgtcattcattttgattttccaagcccc
ccgccagctcgacatcttgctatagccttagagctattgtttgccttaaaagccattgat
acatctggacgactaacagatgcaggattgaatatagcggaattcccagtggaacctata
atgagcaaaatgctactttcttcaaaggatttcaagtgttcaatggaaattgcaacgatt
gttgcagcgatgcaggtccaagctctcttctattatccaacacgaggacaagaaagtatt
aaagctcgcgtcgctagacgaaaatttgatgcacaagaaggagatctaattacttacctt
aatgtggtatctgcgtttgccaaacatggagagtgttccagatggtgtcaatcaaattac
ctcaataaaaagtcgctcaagcgggtagtcctgttacgtgaccaattaattaaattgctt
cagcggttaggcatacgaatttcatcagctgaaggagaacttgagcccgtacttcgttgc
atagcatcgagctttttcccaaacacagcataccttcatccaagtggacaatataaaaca
gtgttagccgatattgttcttcagattcatccacactccattttgtttacggaggagaaa
gcaccatgggttgtttttggtgaggttttgcagaccacccaactattcatgagagatatc
acagtaatcgatcaaatttggttggaagaattagcacctcactactttcaaaaagttacc
gaacgatga
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