KEGG   Daphnia pulex (common water flea): DAPPUDRAFT_347007
Entry
DAPPUDRAFT_347007 CDS       T04347                                 
Symbol
TSU
Name
(GenBank) tsunagi-like protein
  KO
K12876  RNA-binding protein 8A
Organism
dpx  Daphnia pulex (common water flea)
Pathway
dpx03013  Nucleocytoplasmic transport
dpx03015  mRNA surveillance pathway
dpx03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dpx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    DAPPUDRAFT_347007 (TSU)
  09122 Translation
   03013 Nucleocytoplasmic transport
    DAPPUDRAFT_347007 (TSU)
   03015 mRNA surveillance pathway
    DAPPUDRAFT_347007 (TSU)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dpx03019]
    DAPPUDRAFT_347007 (TSU)
   03041 Spliceosome [BR:dpx03041]
    DAPPUDRAFT_347007 (TSU)
Messenger RNA biogenesis [BR:dpx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     DAPPUDRAFT_347007 (TSU)
Spliceosome [BR:dpx03041]
 Complex C
  Other components
   EJC/TREX
    DAPPUDRAFT_347007 (TSU)
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5
Other DBs
NCBI-ProteinID: EFX81381
JGI: Dappu1_347007
UniProt: E9GGD3
LinkDB
Position
Unknown
AA seq 163 aa
MADVLDIENQDEFEFDEDGDQGVAKLKEKAKKRKGRGFGGGHEAREEIKGYEAVDADAAD
DEPGPQRSVEGWILFVTGVNEEAQEEDIHDKFAEFGEIKNIHLNLDRRTGFLKGYALVEY
ETFKEAQAALEKLNESEILGQKISVDWCFVKGPKKNKRERRRR
NT seq 492 nt   +upstreamnt  +downstreamnt
atggcggacgttttagatattgaaaatcaagatgaattcgaatttgatgaagatggtgac
caaggagttgcaaagttgaaagaaaaggccaaaaaacgtaaaggacgtggctttggaggt
ggacatgaggcgagagaagagattaaaggttatgaagcagttgatgctgatgctgccgat
gatgaacctggtccacaacgatctgtcgaaggatggattttatttgttacaggagttaat
gaagaagcacaagaagaagatattcacgataaatttgctgagtttggagaaattaaaaat
attcatttgaatttggaccgtaggactggatttctcaagggatatgcattggttgagtac
gaaacattcaaggaggcacaagctgccctggagaagctgaatgaatctgaaattttggga
caaaaaatttcagttgattggtgttttgtcaaaggacctaaaaaaaacaaacgagagagg
aggagacgatag

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