Daphnia pulex (common water flea): DAPPUDRAFT_347226
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Entry
DAPPUDRAFT_347226 CDS
T04347
Symbol
MSH
Name
(GenBank) putative transcriptional factor muscle segment homeobox protein
KO
K09341
homeobox protein MSX
Organism
dpx
Daphnia pulex (common water flea)
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dpx03000
]
DAPPUDRAFT_347226 (MSH)
Transcription factors [BR:
dpx03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
DAPPUDRAFT_347226 (MSH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
Motif
Other DBs
NCBI-ProteinID:
EFX66335
JGI:
Dappu1_347226
UniProt:
E9HPI5
LinkDB
All DBs
Position
Unknown
AA seq
555 aa
AA seq
DB search
MMIADQVNALNRAREVAAVANLIRLAAASHQSAQAAAAAAAAAAASKAAEHQNNQPSPKI
KRDPAEDSRSSSSSSSRHCTEEEEEEETIRMSSSITGPVVVSSAASVMPVSPVVPQPSKR
ISFSVDSLLSDVRRTSSSSAQQPQHPQTQAADLSLRSVGHNNNNNTSTGSHGGCHTSSDE
EDNKSMMDSTEEVDCDVDCDEDDEDVDIEEEEGMSETSDSTPNGKISRPSPTLASAAASM
FHHHHPHHPANLMSHHHFQQASLQAMQMRGMVAGTHPNSGASVGGPSPFPGSAVGPASHG
WPLPYGLAAAAWAQHASQFVSKDGSDLSKLPASLHHQGLNHHHHHHHLDGLPKLPPGGQL
RCQLRKHKPNRKPRTPFTTQQLMALEKKFREKQYLSIAERAEFSASLSLTETQVKIWFQN
RRAKAKRLQEAELEKLRMTSRGPLGHLMSPHSAAAFGLFGPGAMSGLYGPPPSGGGGPGA
PPNSSNGGSGSTNPNSSAGSNGRPSNASAAAAAGMMSAFASLYPMTSTSSAISSSGPSMG
NNNTVTTSVAAMIHR
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgatgattgccgaccaagttaacgcattgaatcgcgctcgggaagtggccgcagttgcc
aatctcatccgtttggcagcggcatctcaccagtcggcccaagccgccgcagcagcagcc
gccgccgcagccgccagtaaagccgccgaacatcagaacaaccagccgtcgcccaagatc
aagcgtgatccggcggaagacagccgcagcagcagtagcagcagtagccgccactgcacg
gaagaagaggaagaagaagagacgatcagaatgtcgtcgtcaataactggaccggtggtg
gtctcgtcggccgcttccgtcatgcccgtctcgcccgtcgtcccccaaccgtcgaagcgc
atctccttcagcgtcgactcgctcctctccgacgtccgccggacctcgtcttcctcggcc
cagcagccgcaacatccacagacccaggccgccgatttgtccctccgctccgtcggccac
aacaacaacaacaacacgagcaccggcagccacggcggttgccacacgtccagcgacgag
gaggacaacaaatccatgatggactcgacggaagaggtggactgcgacgtcgattgcgac
gaagacgacgaggatgtcgacattgaagaagaggagggaatgtccgaaacttccgactcg
acacccaacggcaaaatctcccggccgtctcccacgttggcctcagcggccgccagcatg
ttccaccaccaccatccgcaccatccggccaatctcatgagtcaccaccatttccagcag
gccagcttgcaggccatgcaaatgagaggcatggtggccggaactcaccccaattccggc
gcatccgtcggtggtccgtctccgttccccggttcagccgttggcccggcctcgcacgga
tggcccttaccttacggcctggccgcagccgcctgggcccagcacgcatctcaatttgtc
tccaaagatggatctgatttgagcaaattgccagccagtcttcaccatcaaggcctaaat
caccaccaccaccaccaccacctggacggtctgcccaaactgccgccgggcggtcaactc
cgctgccaactgcgcaagcacaagcccaaccgcaagccgagaacgccgttcaccacccag
cagttgatggccctcgagaagaagtttagggagaagcaatacctgtccatcgccgagcgg
gccgaattctcggcttcgctctcgctgaccgagacccaggtgaaaatctggttccagaac
cgacgcgccaaagccaagcggctccaggaggccgagctggagaaattgcggatgacgtcg
cgcggacctctcggacatctcatgtcgccgcacagcgccgccgcgttcggcctctttggt
cccggtgccatgtccggactctacggaccaccaccgtcgggaggcggaggtcccggcgcc
ccgcccaactcttccaacggcggcagcggcagtaccaatcccaactcttccgccggaagc
aacggcaggcctagcaacgcctcggcggccgcagctgccggaatgatgagcgccttcgct
tccctctacccgatgacgagcacctcgtcggccatcagttccagcggcccgtccatgggc
aacaacaacaccgtcaccaccagcgtcgccgctatgattcaccgctaa
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